Oncorhynchus gorbuscha (pink salmon): 124046608
Help
Entry
124046608 CDS
T07892
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
ogo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124046608 (pnn)
03015 mRNA surveillance pathway
124046608 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124046608 (pnn)
03041 Spliceosome [BR:
ogo03041
]
124046608 (pnn)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124046608 (pnn)
Spliceosome [BR:
ogo03041
]
Complex C
Other components
EJC/TREX
124046608 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
124046608
NCBI-ProteinID:
XP_046223135
LinkDB
All DBs
Position
LG10:78783430..78789832
Genome browser
AA seq
676 aa
AA seq
DB search
MAVAVGSLQAQLEKAKESLKNVDDNIRKLTGRDPNELRPGQARRPTIPGVGGRGRGINLL
RRGLSDIGGGPGGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSVV
ATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVATDRQKKRIEIEQKL
EVQAEQERKKVEGERRELFDERRAKQTELKLLEQKVELAHLQEEWNEHNTKIVKYIRTKT
KPPIFYLPGRMCSATQKLFDESQKKMNVMFEERCEAFAEYLNKMEARPRRQSLRDSALGK
DLKKEEQEEGKPPGQVVKATGNRFNVEMEDETTLEGDVGVKCKEDRKKRPGEKVMEQAPM
KGENEENGQDIRIIEFREVEEQMEVTAVVREAEWQVGDQDKKEDSLVIGGAEVDNEKEAE
QQQQVQVEKENKPLQNQDPTAVSDDQEKSFEMQPTEDEEPHTEVSIPLLSEPNPSLEVSD
GASIAPEVQIPMLEAGTEPFTTEQSQEADQGAMKQTVDVQPAQYDAAPKELEPLIGESSR
GRGKSKSKDKKGDCGGSSSSSSSSSGSSSSGSSGSSSGSSSRSSSSSGSSSSSSSSRSRS
RGRKDRKHRRKPSERKKGGGDKSQKSSMASGRESKGSKEKGSKSDRKRTSSEGCRSGKMS
SRSDRDRKSDRKEKRR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagtaggttctttgcaagcccagcttgagaaagctaaagagagtttgaaa
aatgtagacgataatatccgtaaattaactggccgggatcctaatgaattgagacctggc
caagctagaaggccaaccatcccaggcgttggaggtaggggacgaggaatcaacttgttg
agacgtggactctctgacattggtggaggacctggaggacccccagctaaacagagggac
attgaaggggcccttctgaggctggccggtgaccagcgagcgaggagagattcacgccat
gacagtgacgctgaggatgatgacgatgtcaagaagccagcgttgcagtcatcagtagta
gctacctccaaggagcgtacgcgccgagacctgattcaggatcagaccatggatgagagg
ggaaaacaaaggaatcgacgcatgtttggcctgttgatgggaacgttacagaaatttaag
caggaatctaatgtggcaacagataggcaaaagaaacgcattgagattgaacagaaattg
gaagttcaagctgaacaagaacgcaagaaagtagagggcgaaagacgagagctctttgat
gagaggcgtgccaagcagacagagctaaaactgttggaacagaaagtggagcttgctcac
ttgcaagaggagtggaatgagcacaatacaaaaattgtcaagtacatccgcacaaagacc
aagccacccatattctatctgcctgggaggatgtgctcagccactcagaagctctttgat
gagtcgcagaaaaaaatgaatgttatgtttgaggagagatgcgaggcgtttgccgagtat
ctgaataagatggaggctcggcctcgacgacagtctctgagggacagcgctctgggtaag
gacctgaagaaagaagaacaagaggagggtaagcccccgggtcaggtagtcaaagcgaca
ggtaatcggtttaatgtggagatggaggatgagacaacactagagggggatgtgggtgta
aagtgtaaggaggacagaaagaaaaggccaggagagaaagtcatggagcaggcacctatg
aagggggagaatgaggaaaatggtcaagacattagaataatagagttcagagaggtggaa
gagcagatggaggttactgcagtggtgagggaggctgaatggcaggtcggggatcaggat
aagaaggaggatagtttggtgataggtggggcagaggtagataatgagaaggaagcagaa
cagcagcaacaggttcaggtagaaaaggaaaataagccgcttcagaatcaggaccccaca
gctgtgtcagatgaccaggagaaaagctttgaaatgcaaccaactgaagatgaagagcca
catacagaagtgtccatacccctgctctcagagcccaaccctagtctggaagtctctgat
ggagcatctatagcccctgaggttcagatcccgatgctggaggctggaacagagcctttc
acaacagagcagagccaagaggctgatcaaggtgcaatgaagcagactgttgatgtccag
cctgcccagtatgatgctgcccccaaggagctggagcctctgatcggggaatcgagcagg
ggacgtgggaagtccaagtcaaaggacaagaagggagattgtggtggcagcagtagctcc
tcaagtagctcttctggctcctcatccagcgggagctctggctcctctagcggctcctcc
agcaggagcagctcctccagcggcagctcctcttccagctcctctagcaggagccgcagc
cgggggaggaaggacaggaagcacaggaggaagccgtccgagaggaagaagggaggtggt
gacaagagccagaagtcgtccatggccagtggtcgtgaatccaaaggttccaaagagaag
ggctctaagtctgacaggaagaggaccagctctgagggctgccggtcagggaagatgtcc
tctcgcagtgaccgggatcgcaagtctgataggaaggaaaaaagacgttaa
DBGET
integrated database retrieval system
