Oncorhynchus gorbuscha (pink salmon): 124046630
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Entry
124046630 CDS
T07892
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124046630
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124046630
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
124046630
NCBI-ProteinID:
XP_046223189
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All DBs
Position
LG10:81276292..81802308
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AA seq
1012 aa
AA seq
DB search
MNANTRRRGHGWSTSALQLCLNIPRLHEALLSGVTALCQNKSEEKKSKKSNNCRKMAPTK
PSIQQDPTRRERDPYWERPANASSCSVSRPKTLHLGGGQQHTSSPWLQALRKEKSRDAAR
SRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGP
PPNTSVKAIGDQRRRTPSAVASDIFEPHLGSHILQSLDGFVFTLNKEGRFLYISETVSIY
LGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTATEDGASSASSSSHAE
TPEPVESTSPTLLPPDNILERSFFVRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRMAMTH
SRSVPIQIMGMVVVAHALPPPTINEVRIDCQMFVTRVHMDLNIVYCENRISDYMDLTPVD
IVGKRCYQFIHAEDVEGIRHIHLDLINKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKN
GNEKNIIWVNYVLSNPEYKDTPMDIAQLPNLPEKASESSETSDSESESKDNSDDNENSKW
DRKGNQTENTEDPETNSTKQQQGQSSSEQEMRRQEEGDSSSNPESQESEDDLEPSDCEVE
TKEGRLGRLEDLHIKVEHYGDGNGGVELHDSPSSSSEEEDDDDDEEDDDSFKACDSATET
LATPAASKQQKRKKRRKKQKWDGSRPKRMCLSSATPSSNTFVGAVPLLPTPSPASASVLK
IKTEMSEPINFDNDSIIWNYPPNREISRNESPYSMTKSVPAHDTFPSPQPGSLQVSIPDS
VLTPPGTEGGSGGAGTRKGVPPSFSGYSSAPSSASSAASLAPPSGSGSSSDPLSPPLSAS
PRDNQQCQSTPTTSGSSLLYTSDLEALQRLQAGNVALPLVQRVTGTLATTSTAASRVYTT
GTIRYAPADVTLAMQAGANLLPNNVAHAMNFVDVNGSPSFGIDPKTPMEMLYHHVHRLNM
AGPFGGTMSGASLTQMPAANVFTTAEGLFSTLPFPVYSNGIHTTQTLERKED
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaatacacggagacgggggcacggttggtccacatcagcgctacagctttgt
ttaaatatacccagactacatgaagcattgctgtcaggcgtcacggctttatgtcaaaat
aaatctgaagaaaaaaaaagtaagaaatcaaataattgtaggaagatggcgcccaccaag
cctagcattcagcaagaccctacaagaagagaacgcgacccttactgggagaggcctgct
aatgccagctcctgttctgtctctaggcccaagacactccaccttggaggagggcaacaa
catacctcatcgccatggttgcaggctctgaggaaggagaagtcccgggatgcggctcgc
tcgcggcgggggaaggagaactttgagttctacgagctggctaagatgttgcctctgccc
ggcgccatcaccagccagctggacaaggcttccatcatccgccttaccatcagctacctt
aagatgagggactttgccaaccagggggacccaccatggaacctgcgcatggaaggccca
ccgcccaacacctccgtcaaagctataggagatcagcgaaggaggactcccagtgcggta
gcctcagacatcttcgagccacacctcgggagccacatattgcagtccctggatggattt
gtatttacactaaacaaggagggaaggtttttatacatctctgagacggtgtctatatac
ctggggctttcacaggtggagctgacaggaagtagtgtgtttgactacgtccaccctggc
gatcatgtggaaatggcagagcagctgggcatgaagctgcccccggggcgaggcctcctt
tctcagggcaccgccaccgaggacggcgccagctctgcctcctcctcctcacacgcagag
acccccgagccagtcgagtcgaccagccccaccctgcttcccccagacaacattcttgaa
cgctccttctttgtccgtatgaagtccacactgaccaagagaggtgtccacatcaagtct
tcaggctataaggtgatccatgttacaggcaggctgaggatccgtatggcaatgacccac
agtcggtcagtacccattcagatcatgggcatggtggtggtagcccacgccctccccccc
cccaccatcaacgaggtgcgcatagactgccagatgtttgtcaccagggtccacatggac
ctcaacatcgtctactgtgagaatagaattagcgactacatggacctgacgccagtggac
atcgtagggaagaggtgctaccagtttattcacgcagaggatgtggagggcatccggcac
atccatttagacttgataaacaagggccagtgtgtgaccaagtactaccgctggatccag
aagaacggtgggtacatctggatccagtccagtgccaccatcgccatcaatgccaagaat
ggcaatgaaaagaacataatctgggtcaactacgtactcagtaatccagagtacaaggac
acacccatggacatcgcccagctacccaaccttccagagaaagcctcagagtcttcagag
acatccgactctgagtccgagtccaaggacaactctgacgacaatgagaactccaagtgg
gacaggaaggggaaccagactgagaacacagaggacccggaaacaaacagtacaaagcag
cagcagggccagtcgtcctcagagcaggagatgaggcgtcaggaggagggagacagctcc
tccaacccagagagccaggagagcgaggacgatctggagcccagcgactgtgaggtggag
accaaggagggcagactgggccggctggaggacctgcacatcaaggtggagcactacgga
gatggaaacggaggggtggagctgcacgactcgccttcctcctcctctgaagaagaagat
gatgatgacgatgaggaagatgacgacagctttaaagcctgtgacagcgccaccgagact
ctcgccacccccgctgccagtaagcagcagaagcgtaagaagaggaggaaaaagcagaaa
tgggacggtagtcgtcctaaacgtatgtgcctctcctctgccacccccagctctaacacc
tttgttggggctgtccccctcctgccgaccccctcccctgccagtgcctctgtgctcaag
atcaaaacggaaatgtccgagcccatcaacttcgacaatgacagcatcatctggaactac
ccacccaacagagagatctccaggaacgagtctccctacagcatgacgaagtccgtccca
gcccacgataccttcccctccccacagcctggtagtctgcaggtctccatcccagactca
gtgctcactcccccaggaacagaggggggcagtgggggcgcaggtaccaggaagggtgta
cccccctccttcagcggttatagcagcgccccctcctcggcctccagcgccgctagcctg
gcccctccctctggctctgggtcctcctccgaccccctgtccccgcctctctcggcctcg
ccgcgcgacaaccagcaatgtcagagcacccccaccacgtccggctcctccctgctgtac
accagcgacctggaggccctgcagaggctgcaggccgggaacgtggctcttccactggtc
caacgagtcaccggcaccctcgccacgaccagcactgctgcctcacgggtctacaccact
ggcaccatccgctacgcccccgccgacgtcactctggccatgcaggcaggcgccaacctg
ctgcccaacaatgtggcccatgctatgaactttgtggatgtcaacggtagccccagcttc
ggcatcgaccccaagacacccatggagatgctgtatcatcatgtccaccggctcaacatg
gctggcccttttgggggtaccatgtccggcgccagtctcacccagatgccagcagccaat
gtattcaccacggcagagggactgttctctactcttccattccctgtctacagtaacgga
atacacaccacacaaactctggagcgcaaagaagattag
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