Oncorhynchus gorbuscha (pink salmon): 124046689
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Entry
124046689 CDS
T07892
Symbol
tulp4b
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124046689 (tulp4b)
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Other domain-containing proteins
Tubby family proteins
124046689 (tulp4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Ribosomal_60s
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
124046689
NCBI-ProteinID:
XP_046223312
LinkDB
All DBs
Position
LG10:complement(88516606..88533967)
Genome browser
AA seq
1940 aa
AA seq
DB search
MSRNCEPGHSVRMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCQRRYYEEGWLAT
GNGRGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGSQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMIAHVLLHESDGIVGMSWNCPCFLVEDST
ESDTDSDDNNPPQVRNLKPLLTVSFISGDISLMNNYDDLAPTVIRSGLKDVEVQWCSQGD
LLAVAGMERHGVPGLPSESIMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRLF
LACGPALYVVRVEHRVASLQLLCQQGIASALREERDVGKLNMPSLLCSYVTTAFIPTIKP
PIPDPNNIRDFVSYPTAGNERLHCTMKRAEDNPEAGGPCYTLYLEHLGGLVPILKGRRIS
KLRPEFIIMDPKTDSKAGGLGTGKDEVCVNAMISYMTDSCNCSDSSDIELSDEWVGKKSP
KLSRGNRSPKHSRRRRNMESRKSPKTSRTSQEGLRSPRLPTKKPLIRSPSLTRREMSMDG
ISEHNYLAQVTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRRIS
LDFMSLPVFNPNVFSEDEDDLAVTGPSGVTGDNPPCTVNIPIAPIHSPAQAMSPTQSIGL
VQSLLANQNIQLDVLTNPTATASAAAAAAAAAAAAAAASASVLGSDHGQDAVAVHYSGTL
GRYSNPGQVIFNGLEMGPLLAGTLPPPPPPHSLPQQPHQQRPQSQQTHQQQQSKQPQQIQ
TQQQQQQQQRIQHQQLQHQQPQIPQHQQLQHQQPQIPQQHQQLQQLHIQQIQQQQQQQTQ
QHQALQQQYQQQQAALQQQQQQIQQQHQHLQQQQIAQQHQQMQLQHEQMHQQQQQMQQQQ
QQIRQQIIEMRQQQQQLQQQHQQIQQQHQQMQRQHQQMQQQLKLQITLPPPPTGYPTISL
QQFQVPHPSPELGPERGQQGHTQSHTLGRPSLPRSRPPSFIDVDSIRSRPPSFLEADTSR
SRPPSFIDIDTIRTRPPSFIDIDTSTLRSRPPSFLDADSSRSRTLSFIDTDTLRSRPPSF
LDAETSLEIQMRKVNAPPPYPGTVVSAATATTSTAPQTLITNCDNPNILVTADPCLKKDE
FSLHPVGLQYQMGYERITTFDSSGNVEEVCRPRRRLIRNQNAYAVQGMGGSATLKVTSSS
DSKKIHLPYSSATLSRLSVPRYSIPSGDPPPYPDPANQVNINTTTLPPPQRMDSSHMIHA
TLRRDRRDGESRLKVSQMVDASRTLPSKSKINSAALALSYQQRVPTALYTCTQCSSNSSS
TSVSVSGGGSSSSGIAGGTVVRQDFPPGKGAHHSTIIVHSKSTSPLASQSSYNLLSPIDN
SRDRTVYVNSAFTEDEALSQQCRHLTLGEVSLTLKRPPPYQWDPNTAEEFWIPQEQTILV
PPPPPTHKPPPPLIFSNAQHLDMTRLPFLLSTKPPSSPSTVTFPSGYQISLSPFPPGGGQ
GGPPLQSMQSPPPPCPPNEVVAPVPQFTQQDPNLVLPPGYPPNLANLACCPLPPMYPGAS
SCAGLQLQPVSLHPWNPYSLPMQDPSGSATLPSKSNQLLEKPVLSPSPPTVPPPPPPSLP
PPPPPTMLPKPKSPTEELTESASSFQEPSSLNESPVPDRQGTDRFSKKSRKRLDSRAEEA
NMTTVSEGKSKKEGRALSDFNSLISSPRLGGREKKKPKGQREQLNKTKKLNRTSTTSEFQ
DSSESEPELFISGDELMNQSQSSKKGWKSKRSLRMASELEEIKCRKANEREDRGLGSQGF
VYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQY
PFSAVQAFAVALANVTQRLK
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaactgtgagcctggtcactcagtaaggatgttagctgctgtggaacatggt
cccatcctctgcagcgactccaacatcctctgcctctcctggaagggccgggtccccaag
agcgagaaggacaagccggtgtgccagcggcgctactatgaggagggctggttggccaca
gggaacgggagaggggtggtgggcgtaacgttcacatccagccactgcaggagagacagg
aacacacctcagagaatcaacttcaacctgcgaggacacaacagtgaggttgtgttggtc
cgttggaatgagccctttcagaagctggccacgtgtgacatggagggaggcatctttgtt
tggattcaatatgaggggcggtggtctgtggagttagtgaatgaccgcggtgcacaggtg
agtgacttcacatggtctcatgacggcagccaggccctgatcgcctaccgggatgggttt
gtcctggtgggctcggtcagcggacagagacactggtcctcagagattaacctggagagc
cagatcacctgtggcatctggacacctgatgaccaacaggtgttgtttggtacggctgat
ggtcaggtgatagtgatggactgccatggtcgtatgatcgcccacgtcctcctgcatgag
tcagatggcatcgtcggcatgtcctggaactgtccctgtttcctggtggaggacagcaca
gagagcgacaccgactctgatgacaataacccacctcaagtgcgtaacctgaagcccctt
ctgacagtcagcttcatatcaggagacatcagtttgatgaacaactacgatgacctcgct
cctaccgtcatccgctcaggactcaaagatgtagaggtccagtggtgctctcagggggac
ctcctggcagtagctgggatggagagacatggtgtccccggactcccctctgaatctatc
atgaggaacgccctggtcaagttctacaatgtccaaggagaacatatctacacgttagaa
acacctgcccagcgccccatcaccaccatctgctggggccatagagactctcgtctgttt
ctggcatgtggcccggcgctgtatgtggtgcgagtggagcaccgggtggccagcctgcag
ctgctgtgccaacagggcatcgccagcgccctgcgggaggagagggacgtgggcaaactc
aacatgccttccttactctgctcctatgtcaccaccgccttcatacccaccatcaagcct
cccattcctgatcccaacaacatccgggactttgtcagctaccccactgctggcaacgag
aggttgcactgcaccatgaagcgagcggaggacaaccctgaggcagggggaccctgttac
accctatacctggaacacctaggggggctggtgcctatcctcaaaggcagacgaatcagc
aagctacgcccagagttcatcatcatggaccccaaaacagacagcaaagcaggtgggctt
ggcacaggaaaagacgaggtgtgtgtgaatgctatgatctcctacatgactgacagctgt
aactgttccgactccagcgacattgagttgagtgatgagtgggttggaaagaagtcgcct
aaactatccagaggaaacaggtctcccaagcattccaggcgtagaaggaacatggaatca
agaaaatctcccaagacgtctaggactagtcaggaagggcttcgatcgccaaggttacca
acgaagaagcctctgattcgttctcccagtctgacacgtcgagagatgtccatggatgga
atctctgagcataattacctggctcaagtcacgtccaatatttgggggactaagttcaaa
attgtgggacttgcttctttcttacctgctaatctgggtgcagttatctataagaccagt
ttgctccatctacaaccaaggcagatgacaatctaccttccagaggtgcggagaatatca
cttgacttcatgagcctgccggtctttaacccaaacgtcttcagtgaggatgaggatgac
ttggcagtaacgggaccatctggagtgacaggtgacaaccctccatgtacggtcaacatc
cccatcgcgcccatccacagccccgcccaggccatgtcccccactcagagcattggtttg
gtccagtccctgctggccaatcagaacattcagctggatgtcctgaccaatcccacggct
acggcttcagcagcagcagcagcggcagcagcagcagcagcagcagcagcggcctcagcc
tctgttctggggtctgatcatggtcaggatgctgtggcagtacattacagtgggactcta
ggaaggtactccaacccaggacaggtaatatttaatgggttagagatgggtcccctcctg
gctggaacattacctccacctccgcctccacatagcctcccacaacaacctcaccaacaa
cgtcctcagtcacaacagacgcaccaacaacagcagtccaaacaaccacagcagatacaa
acgcaacagcagcagcagcagcagcagaggattcaacatcaacaactacagcaccaacaa
ccacagattccacaacatcaacaactacagcaccaacaaccacagattccacaacaacat
caacaactacaacagcttcacatacagcagatccaacagcagcagcagcaacagactcag
cagcaccaagcactgcaacaacagtaccaacaacaacaggcggcactgcaacagcaacaa
cagcagatccaacagcagcaccaacacttgcaacagcagcaaatcgctcagcagcaccaa
cagatgcaactgcagcacgagcaaatgcatcagcagcagcaacaaatgcagcagcaacaa
cagcagatccgacagcagattatagagatgaggcagcaacagcagcagttacagcagcag
catcagcagatacaacagcaacaccaacagatgcagagacagcaccaacaaatgcagcag
caactaaagctgcagatcaccttgccccctccgcctactggctaccccaccatctctttg
cagcagtttcaggtaccccaccccagtccagagttgggaccagaaagaggacagcagggc
catactcagagccatactctgggcaggccaagtctaccgcgatccaggcctccatcattc
attgatgtagacagcatacggtctagacctccttccttccttgaagcagacacatcaaga
tctaggccgccgtcattcatcgacatagacacaatacggactaggcctccttctttcatt
gatatagataccagtacattgcgatctagacccccgtctttcctcgatgcggactcctcc
cgatctagaactctttcattcatagacacagacacactacggtctagacctccttccttc
cttgatgcagagacttcccttgagatccagatgaggaaggtgaacgctcccccgccctac
ccaggaaccgtagtgtctgcagccaccgccacaacctccaccgctcctcagaccctcatc
accaactgtgacaaccccaacatactggtcacagcagacccttgtctgaagaaagacgag
ttctcactccacccagttggtctccagtaccagatgggatacgagaggatcacaaccttt
gacagcagtgggaatgtagaggaggtgtgtcgccctcgcagaagactcatacgcaaccag
aacgcctacgctgttcaaggcatgggaggttctgccacacttaaagtcacctcatcgtct
gacagtaagaaaatccatcttccttacagctcagcgactctaagccgcctctcggtgcca
cgatactccatacccagcggagacccgcccccctacccagatccagccaatcaggttaac
attaacacgacaacacttcctcctccccaacgcatggacagtagtcacatgattcacgct
accttgcgacgtgacaggcgagatggggaatcccgcttgaaggtctcccagatggttgat
gcttcaaggactctaccgtccaagtcgaagatcaacagtgctgccctagcgctctcttac
cagcagagagtgccaacagctctgtatacctgcactcagtgcagcagcaacagcagcagc
accagtgtcagtgttagcgggggtggtagtagcagcagtggcattgcaggaggcactgta
gtgcgacaggatttcccaccaggaaaaggtgctcatcacagcaccatcattgtccactcc
aaaagcacttcacctcttgcttctcagtcatcgtacaatctgctgagtcctattgataac
agcagggataggactgtatacgtgaactctgcctttactgaagacgaggcattaagtcag
cagtgtcgtcacctgactcttggggaggttagtttaactctgaaacgtcctccgccatac
cagtgggacccaaacaccgcagaggagttctggatacctcaagaacagaccatcttagtt
ccccctccaccaccaacacacaaacccccacccccactcatcttcagcaatgctcagcac
ctggacatgacgcggctgcctttcctactctcaacaaaaccccccagcagcccaagcact
gttactttcccatcgggttaccagatctccctgtcacctttccctccagggggaggtcag
ggtggacccccactccagtcaatgcagagccctccaccaccctgccctcccaacgaagta
gttgccccagttccccagttcacccagcaggaccccaacttggtcttgccacctggatac
cctcccaaccttgccaacctggcttgctgccctctgccaccgatgtacccaggagctagc
tcctgtgccgggcttcagctgcaacctgttagcctgcacccctggaacccctacagccta
cccatgcaggacccctcaggctctgccaccctgcccagcaagtctaatcaactgttagag
aagccagtcctctccccatctcctcctacggttcctcctcccccacctccttcacttcct
cctcctcctccaccaaccatgctgccaaaacccaaaagccctacagaggagctgacggaa
tctgccagtagcttccaggagccgtcttctctaaatgaaagccctgttccagaccggcag
gggactgacaggttcagcaagaagagccgtaaacgtctggacagccgagctgaggaggca
aacatgaccaccgtctcagaaggaaaatccaaaaaggaagggcgcgccctctccgacttc
aactccctcatctccagccccaggcttggcggcagggagaagaagaaacccaaaggccag
agggagcagctgaacaaaaccaagaagctcaacaggacaagtaccaccagcgagttccag
gacagttccgagagtgagcctgagctcttcatcagtggagatgaactgatgaaccagagc
cagagctccaagaagggctggaagagtaagaggagcctgaggatggccagtgaactggaa
gagatcaagtgcaggaaggccaatgagagagaggaccgcgggctgggcagccagggattc
gtctacgtcatggccaataagcagccactctggaacgaggcaacacaggtctaccagctg
gacttcggaggacgggtaactcaggagtctgctaagaactttcagatcgagttggatggc
agacaggtgatgcagtttggcagaatcgatgggaacgcctatatcctggatttccagtat
cctttctcagcagtgcaggcttttgctgtggccttagccaatgttactcaaaggcttaag
tga
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integrated database retrieval system
