Oncorhynchus gorbuscha (pink salmon): 124046706
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Entry
124046706 CDS
T07892
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124046706 (smc6)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
124046706 (smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
ERM_helical
AAA_21
AAA_29
FtsK_SpoIIIE
Trans_reg_C
DUF2937
Motif
Other DBs
NCBI-GeneID:
124046706
NCBI-ProteinID:
XP_046223362
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All DBs
Position
LG10:complement(89196704..89233985)
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AA seq
1087 aa
AA seq
DB search
MKRKSKVLNDEKFTKKRRLEAVKEEEDGREDHGTSFNDHSTSPSGLGDIGVIESITIKNF
MCHHLLGPFQFGPNVNFIVGNNGSGKSAILTALIVGLGGKATITNRGASLKGFVKNGEST
ADVTVKLRNRGPDAYKGDVYGECISIEQRISSDGVRTCRLKSKTGHLVSNKKDELTAILD
HFNIQVDNPVSILNQEMSKQFLHSKSEGDKYKFFMKATLLEQMKRDYIHIKQTKAVTREQ
VERQEECLKDLKQEFLQKKERYENLSSVGKMKETLEELKKMMAWCLVREKERLVQQLQEQ
IDTEGSNHKHEENLQLCQNKVTVAEKELQEIQSRLHSRKEEEESLSEDCRKIKEEVKSKN
KAQKEQEVVYFRAVNKLKQSEKEQSLLHERIHKVKNIGSQNKKAEAEHTKRLQKISSLRT
QLEKHETQCTALNQEIKDRQQALFKGKEELDKLRLEEKNIQVSMEAKLKRKNQLLASRSN
KLKRFGDNMPDLLDNIDKAYIQGRFTKKPLGPIGACINLKDPALAVAVESCLRSFMKTFC
CDNYKDEAVLQDLMSRYFSKGNRPQIIVSPFSGSVYKVQGRGVDHPDYPSVLDSLSIANP
VIANCLIDMRGIESILIIKEKNAARRVMQQGRPPRNCREAFTVEGDQVYPNRYYTPDFSM
AKYLGGDLETEIRMVESELENYKAQLSRFQLHLSSVNEDIQRMEAKLHSTIMTLKKTLAT
VNQVKAGVTELENVEEEQTDDISTLEEVAQENQQRIDGEKKTVEEAKEELEEHKRTSKEV
DCQYVDVRNRIEQLAEETEPLKEEQGKAEAQCSKLERSLKILEKKLKDHQDNMQAMRSDL
ALKEEEVTEFVAKAKEISPERQKVDRSARSIDVEITRLRRKISVQESSHGDHEQVVREYA
EALANYRDKSNQVRDLKKFIDRLDNIMSDRQTRYKIMRRSLSVRCKLYFNNFLIKMNCCG
SMMFDHNSETLSISVKPPGRENDSMSDMRSLSGGERSFSTVCFILSLWEITESPFRCLDE
FDVYMDMHNRRISLDLLLELSERQHLRQFFFITPLSTSNLPKSDHIKIHQLQDPERTGGH
TGDENLG
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggaaaagcaaagtactgaatgatgaaaaattcaccaagaaacgtagattggaa
gcggttaaagaggaagaagatggcagagaggatcatgggacatcatttaatgaccactcc
acctctccctcgggtttgggagatattggagttatcgaaagcatcaccataaagaatttc
atgtgtcaccatttgctcggtccattccagttcgggcccaatgtgaacttcattgttggc
aacaatggaagtgggaaaagtgccatactgactgctctaatagtgggccttggtggaaag
gccaccatcacaaacagaggagcatctttgaaaggttttgtgaaaaatggtgaaagcaca
gcggatgttacagtgaaactgaggaacagaggaccagacgcgtacaaaggggatgtctac
ggagaatgcatttctattgaacaaaggatttctagtgatggtgttcggacgtgcaggttg
aagagtaaaacagggcacttggtttcaaataaaaaggatgaattgactgcaattttggat
cacttcaacatccaggtggataaccccgtctcaattcttaaccaagaaatgagtaagcaa
tttctccattcaaaaagcgaaggagataagtataagttcttcatgaaagcgactctactg
gagcagatgaagagagactacatccacatcaaacagactaaagcagtgaccagagaacag
gttgagaggcaagaagagtgtctaaaggatctcaagcaggagtttttgcagaagaaggag
aggtacgaaaacctgtcatctgttggtaagatgaaggagactctggaggaactgaagaag
atgatggcatggtgcttggtgagagaaaaggagcggttggttcaacagctacaggaacag
atagacacagagggaagtaatcacaaacacgaagaaaaccttcaactctgtcagaataaa
gtgacagtagctgaaaaggaattgcaggagatccagagcaggcttcacagtcggaaagaa
gaggaggagtctctgtcagaggactgtcggaagataaaggaagaagtaaagtcaaagaat
aaagctcagaaagagcaagaggtggtgtatttccgtgctgtgaacaaactgaaacaatca
gagaaggaacagtcccttcttcacgagagaattcacaaagtgaaaaatattgggagtcag
aacaagaaggccgaggcagagcacaccaagagactgcagaagatctccagtctcaggacg
cagttggagaagcatgagacgcagtgcactgctctgaatcaggagatcaaggacaggcaa
caggctctgttcaaagggaaggaggagttggacaaactacggttggaagagaagaatatt
caggtgtcgatggaagccaagctgaagaggaagaaccagctcctggccagtagatccaac
aaactgaagcgctttggagataacatgcctgacctgctagacaacatcgacaaggcttac
atccaaggacgttttaccaagaaacctcttggccctataggggcatgtataaacctgaag
gaccctgccttagctgtagcagtggagagctgcttgaggagcttcatgaagaccttctgc
tgtgacaactacaaggacgaggccgtcctccaggatctgatgtcacgctacttctctaaa
ggcaacagaccccagatcattgtcagccccttctctggctccgtctacaaggttcaagga
cgtggagtcgatcacccagactacccctcagtactggactctctgagcatagccaaccca
gtcatcgcaaactgtctcatcgacatgagaggcatagaatccattctcataatcaaggag
aagaatgcagccaggagagtgatgcaacaaggccgacccccgaggaactgtcgtgaggcc
ttcactgtggagggagaccaggtgtaccctaaccggtactacactccagacttcagcatg
gccaaatacctcgggggagatctggaaacagaaattcgcatggtggagtcagagctggag
aactacaaggcccagctctcccggtttcagcttcacctgagctcagtcaatgaggacatc
cagcgcatggaggccaaactacacagcacaatcatgactctgaaaaagactctggccaca
gtgaatcaggtcaaggccggtgtgaccgagctggagaatgttgaggaggaacagaccgat
gacatcagcactttggaagaagtggctcaagagaaccagcagagaatcgacggtgagaag
aaaactgtggaggaagcgaaggaggagctggaggagcataagagaacttccaaggaagtt
gattgccagtatgttgacgtgaggaacaggatagaacagctggccgaggagacagagcca
ctgaaggaggaacagggtaaggctgaagcacagtgcagtaaactggaacgaagcctgaag
atcttagagaagaaactcaaggatcatcaggacaacatgcaggctatgagaagtgatctg
gctctgaaagaagaggaggtcacagaatttgtggccaaagccaaagagatcagcccagag
cgccaaaaggtagatcgcagcgccaggagtattgatgtggagatcacgaggttacggagg
aagatcagcgttcaggagagtagccatggagaccacgagcaggtggttagagagtatgca
gaggccctggctaactacagggacaaatcaaaccaagtgagagatctgaagaagttcata
gatcgtcttgacaacataatgtccgacaggcagacccggtacaaaataatgcgcaggtcc
ctctctgtgagatgcaagttatactttaataatttcctgataaagatgaattgctgcggg
tccatgatgtttgatcacaacagtgagacgctgtccatctcggtgaagccgccaggccgt
gagaacgacagtatgagtgacatgcggtctctgtctggaggagagagatccttctctaca
gtgtgttttatcctctccctctgggagatcactgagtcccccttcaggtgcctggacgag
tttgacgtctacatggacatgcacaatcgtcgtatctcactggatctcctcctggagctg
tcagaacggcagcaccttcgtcagttcttcttcatcacccctctatctaccagcaatttg
ccaaaaagtgaccacatcaagatacaccagctgcaggatccagagaggacaggaggacat
acaggagatgaaaacctggggtag
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integrated database retrieval system
