Oncorhynchus gorbuscha (pink salmon): 124046816
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Entry
124046816 CDS
T07892
Name
(RefSeq) M1-specific T cell receptor beta chain-like
KO
K10785
T-cell receptor beta chain V region
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04020
Calcium signaling pathway
ogo04514
Cell adhesion molecule (CAM) interaction
ogo04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124046816
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124046816
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
124046816
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Gene cluster
GFIT
Motif
Pfam:
C1-set
V-set
Ig_3
Ig_2
ig
C2-set_2
Motif
Other DBs
NCBI-GeneID:
124046816
NCBI-ProteinID:
XP_046223527
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All DBs
Position
LG10:complement(95783765..95824126)
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AA seq
317 aa
AA seq
DB search
MSFTEMMSDMTHPIVLLSWLFLLSPSQCGAAGPIVLQPRQFLTLPGNTTTSSPVTLQCSL
GPGFSMPSYTMMWYRQVRYGGPVEFLIKEYEKTRGRYKEDLDTSGNRFILQMSELVVEDS
GVYYCAASHGDSGAYAAYFGEGTKLTVLDPNIKVTEPTVKVLAPSARECEDRNKKKKKTL
VCVATRFYPDHVTVFWQVNNVNRTEGAGTDNRALWDNDGLYSITSRLRVPANEWHKPENR
FTCIVSFYNGTGNIEVNDTISGDLQGQSGGEITTDYYVKSTQTAKLAYSIFIAKSTFYGL
VVMVMIWKFQGSSEKQI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcacagagatgatgagtgacatgacgcatcctatagtcctcttgagttggctg
tttctcctgtccccaagtcagtgtggagcagcaggccccatagtgcttcagcccagacag
ttcctcacccttcctggtaacaccaccacctccagtccagtcaccctgcagtgctccctg
ggtccaggcttcagcatgcccagctacaccatgatgtggtaccgacaggtccgctatgga
ggcccagtggagttcctcattaaggagtacgagaaaacccgggggcgatacaaagaggac
ctggacacatcggggaacaggttcatcctgcagatgtctgagctggttgtggaggacagt
ggtgtctactactgcgctgctagtcacggtgactctggtgcttatgctgcctactttgga
gagggaactaagctaacagttctggatcccaacatcaaagtcactgaacccacagtgaaa
gtcctagcaccctccgctagggagtgtgaagatagaaacaagaagaagaagaagacccta
gtgtgtgtagccacccgcttctaccccgaccacgtcacggtcttctggcaagtcaacaat
gtcaacagaactgaaggtgccgggaccgacaacagggccttgtgggataatgatggttta
tacagtatcaccagcagactgagagtcccagccaatgaatggcacaaaccagagaacaga
ttcacctgcattgtcagcttttacaatgggactggaaatatagaagtgaatgacaccatt
agtggagatctccaaggtcaaagtgggggagagataacgacagattactatgtgaagagc
acccagactgccaagctggcctacagcatcttcatcgctaagagtaccttctatggcctg
gtcgtcatggttatgatttggaagttccagggctcctcagagaaacagatttaa
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