Oncorhynchus gorbuscha (pink salmon): 124046820
Help
Entry
124046820 CDS
T07892
Name
(RefSeq) TBC1 domain family member 8-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124046820
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124046820
Endosome - Golgi transport
Rab GTPases and associated proteins
124046820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
Motif
Other DBs
NCBI-GeneID:
124046820
NCBI-ProteinID:
XP_046223537
LinkDB
All DBs
Position
LG01:complement(97083662..97102104)
Genome browser
AA seq
1143 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTEKSNDFFILQRRRGHGDSGGKFTGLLVGALDTVLDSNARVT
PFRILLQVPGSQVSWTIACGAAVEDMNRHWDWLVQNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGKQAAQEEDPEKFREVLLKFELRFGLPSSEKLVTTYSCCCWKGRVPRHGWLYL
SINHMAFYSFLLGKEVKFVIPWVEVMRLEQVSTGLMTDMVRVTTRRRQRDFSMFLSLDEA
FGVMGQLADIALRRLLDSGGLELDHVLQQSSNITKRVLEEQALRAYVLALFRLPRAECLQ
EVALCSVWTPHARCHTAGTLYTTDSYLCFASREEGHCSLLIPLSEVISIEKAESTSLLPN
PVIVSVRSKKAFQLIELQDRDSLVDSLMSRLRALQWKHSMFHSKKSLTSSSPYYTFYYDT
MYCDGEEIEERALRHTVNTEDLMAYYHHSQPDLNNSTATMEQVKERLWDDHFSAYGRGVH
MFRTEKIQKLVAMGIPESLRGELWMTFSDSSSELASHPDYYSGLVTESIGHSSLATEEIE
RDLHRSLPDHPAFQNVTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYTKEEEAFW
LLVAVCERMLPDYFNRRVIGAQVDQSVFEELIQERLPELAEHIPDLSPLSSLSLSWFLTL
FLSVLPFRSAVCVVDCFFFHGIKAIFQLGLAVLDANAAALCASADDGQALMILTGFLDHV
KYDENPSPPAPHPPSSPRGEEECSTTVELHTLITDLIIDSYEKFGDLTVRRLERLRCRHR
IQVLQAHEDITKENALRVVTPDVSLSPENLADVYDLFKTEHFINLYWGDGSTTVALQHHD
PGQPYVEQYRVDRAQFKSLYVLLVPWLCGLHTDTVAHRTFTLLDQDRDLLITFRKFAGWL
DTLYCEELNEKIRLLYRLHIPPALTESEDDFPPLKSPLLSTTRPLHIEMPNAPVCVHVEE
EIRDYQEQLKQMLKDLAQEKNVEKPLPLMNQREFIQFCKTLYSMFHGNPDENELFQAIAT
VTSLVLQIGEVGHRSRSEVSSEGGAGDEVEEDHREGSQEDHPVFSTKEGDAERQEGTRKS
SERSESSSEWTVSYAQILASLLTEQQLVNFFEKPLDLSAKVAVAKVKQYHERAGLLMLQQ
GTS
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaatccagaggaagttttgctgaaaaacgcgctgaagctttgggttaccgaa
aaatctaacgatttcttcattttgcagcgccgaagaggacatggggattcagggggaaaa
tttacaggtcttctggtgggggctctggacacagtgctggactccaacgcccgggtcaca
ccattccgtatcctgctacaggtgcctgggtcacaggtcagctggactatagcttgtggt
gctgctgttgaggacatgaacaggcattgggactggctggtccagaatctactccactct
ctctcagtatttgagaacaaggaggatgtcgccagcttcgtcaaagggaaagtcaagggt
ctgatagcagaggaggtgagggggaagcaggcggctcaagaggaggacccagagaagttc
cgggaggtactgctgaagtttgagctgcgtttcggcctgccctcctcagagaagctggtc
accacctactcctgctgctgctggaagggacgcgttccccggcatggctggctctacctc
agcatcaaccacatggccttctactccttcctgctgggaaaggaagtgaagtttgtgatc
ccgtgggtggaggtgatgaggctggagcaggtctccactggcctcatgacggacatggtg
cgtgtgacaacgcggcggcgccagcgggacttctctatgttcctgagcctggatgaggcg
ttcggggtcatgggtcagctggctgacatcgcactgcgccgcctgctggatagcggaggt
ctagaactggatcacgtcctccagcagtcctccaacatcaccaagagggttctggaggaa
caggcattgagggcgtacgtcctggctcttttccggctaccgcgggccgagtgtctccag
gaggtggctctgtgttcagtgtggacgccccatgcccgctgccacacagctggaacactc
tacaccaccgacagctacctatgtttcgccagtcgagaggagggccactgcagcctgctc
atccccctttcagaggtgatctccatagagaaggctgagagcaccagcctgctgcccaac
ccagtgatcgtcagtgtgaggagtaagaaggccttccagctgatcgagctgcaggacaga
gacagcctggtggatagtctgatgtcacggctcagagccctgcaatggaaacactccatg
ttccacagcaagaaatctctgacgtcctcgtctccctactataccttctactatgacacc
atgtactgtgacggggaggagatcgaggagagagcactacgtcacacagtgaatacagag
gatctgatggcatactaccaccactctcaacctgacctcaacaatagcacggctaccatg
gagcaggtgaaagagcgtctgtgggatgaccatttctctgcgtatggtcgtggtgtccac
atgttccgcacagagaagatccagaagctggttgccatgggaataccagagtcgctacgg
ggagagctatggatgaccttctctgactcatcgtcagagttggcttcccacccagactac
tactcggggctggtgacggagtctatagggcacagcagcctggccacggaggagatcgag
agagatctgcaccgctcactgcccgaccaccccgccttccagaacgtcacgggcatcgct
gccctacgccgtgtcctcaccgcatatgcccaccgcaaccccaagattggttactgccag
tcaatgaatatcctggcatctgtgctgcttctgtacactaaagaggaggaggccttctgg
ctgctggtggctgtgtgtgagagaatgctgcctgactatttcaaccgcagagtcataggt
gctcaggtggaccagtcagtgtttgaagagctgatccaggagcgtcttcccgagctggcc
gagcacattcccgacctctcccccctctcttccctctccctgtcctggttcctcaccctc
ttcctcagtgtgcttcccttccgcagcgccgtctgtgtggtagactgcttcttcttccac
ggcatcaaagccatcttccagctagggctagctgtgctggatgcgaacgctgcggcactg
tgtgctagtgcagatgacggccaggccctcatgatcctcactggctttctggaccacgtg
aagtacgatgagaatccgtctccacctgcccctcaccctccctcgtctccgaggggggag
gaggagtgcagcacgactgtagaactacacaccctgatcacagacctcatcattgactcc
tatgagaaatttggagacctgacggtgagacgattagagcggttgcgatgcagacaccgg
atccaggttctccaagcacacgaggacatcaccaaggagaacgctctcagggtcgtgacc
ccagatgtctctctctcccctgaaaacctggctgatgtctacgacctcttcaagacagag
cacttcatcaacctgtactggggtgatgggagcaccactgtggctctccagcaccatgac
ccaggccagccctatgtggagcagtacagagtggaccgggcccagttcaaaagcctgtac
gtgctactggttccctggctgtgtggcctccacactgacaccgtggcccaccggactttc
acactgctggaccaggacagagacttactcatcaccttcagaaagtttgccgggtggctg
gacacactatactgtgaggaactgaatgagaagatcagacttctgtatcgtttgcacata
cctccagctctgactgagagtgaggatgactttcctccactgaagagccctctgctgtcc
actaccagaccacttcatatagagatgccgaatgctcctgtgtgtgttcatgttgaagag
gagatcagagactatcaggagcagttgaagcagatgttgaaggacctggctcaggagaag
aatgtggagaaaccgctacctctaatgaaccagagggagttcatccagttctgtaagacc
ctctacagcatgttccatggcaacccagacgagaacgagctctttcaggccatcgctaca
gtgaccagcctagtgctgcagatcggtgaggtcggccaccgtagccggtcagaggtcagc
agcgagggcggggccggagacgaggtagaggaggatcacagggaggggagtcaagaagac
caccctgtcttcagcaccaaagaaggagatgcagagaggcaggaggggaccaggaagagt
tccgagcggtctgagagttcgagcgagtggacggtcagctacgctcagatcctggcctcg
ctcctcacagaacagcagctggtcaacttctttgagaaaccactggacctctcagcaaag
gtggctgtagcaaaggtgaaacagtaccatgaaagggccggtctgcttatgcttcagcaa
ggaaccagctga
DBGET
integrated database retrieval system
