Oncorhynchus gorbuscha (pink salmon): 124046822
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Entry
124046822 CDS
T07892
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124046822 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124046822 (capn3a)
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
124046822 (capn3a)
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C2: calpain family
124046822 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
124046822
NCBI-ProteinID:
XP_046223545
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All DBs
Position
LG10:complement(97642176..97711022)
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AA seq
714 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFSGQDFTALKQECLTKKCLFEDDTFPASV
ESLGYKELGHKSNKVKNIVWRRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQDQSFSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SMMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEESQHKASKVRLVRLRNPWGQVEWNG
PWSDNSKEWVSLSKGEKDQLQHQSAEDGEFWMAFEDFKKNYTKIEICNLTPDALEDDKIH
KWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQFRLCLLEEDDDSEDNEVACSFVVSLMQK
NRRKERKLGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVTQRF
RLSPGEYVIVPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHTVPAPANAGEESEED
QQFRSLFQQIAADVSTEMEVTANELKNVLNRVVSKHKDLNTEGFSLECCRSMIALVDVSS
MDGTGRLSLQEFRHLWNKIKQWQGIFRHYSSDQAGIINSYEMRNAINDAGFRLNNQLYDI
ITMRYANEGMNIDFDSFISCLVRLEAMFRAFQAFDQDGTIRLSVLEWLQLTMYA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacaccgtccggcttcttctgtgaccggctgatccgggagagagagagaaga
gatggagaaggatccctcagcaagcccctgcgcttcagcggacaggactttaccgcactc
aaacaagagtgcctcaccaagaagtgcctgtttgaggatgacaccttcccagcctccgtg
gagtctctggggtacaaggagctgggacacaagtccaacaaggttaagaacatcgtctgg
aggagacccaaggagatctgtgagaaccctcagttcattgtgggcggagccagcaggaca
gacatttgccagggagaccttggtgactgctggctgctggctgctatagcctgtctgact
ctgaatgagaagcttctctaccgggtcgttcctcaggatcagagcttctccgagggatat
ggcggaatcttccacttccagttctggcgctatggcgactgggttgacgttgtcattgac
gaccgcatccccaccttcaacaaccagctggtgttcaccaagtctgctgagaggaacgag
ttctggagcgccctgctggagaaggcctacgccaagcttcacggttcctatgaggccctg
aagggtggtaacaccacggaggccatggaagacttcaccgggggcgtgacagagttctat
gagatgaaggaggcgcccaaggaactgtacaagatcatgaagaaggccctggagagaggc
tctatgatgggctgctctatcgactccctggttcctgctcgatttgagacgcgcactgtg
actggccttgtgaagggccacgcctactctgtgactgccgttgaggagtcccagcacaaa
gcgtctaaggtgcgtctggtgcgcctcaggaacccctggggtcaggtggagtggaacggg
ccctggagtgacaactcaaaggagtgggtgtctctgtctaagggagagaaggaccagcta
cagcatcagagtgctgaggacggggagttctggatggcctttgaggacttcaagaagaac
tacaccaagattgagatctgcaacctgacccctgatgccctggaggacgataagatccac
aagtggacggtgtctgtgaacgagggtcgttgggtcagaggctgctctgccgggggctgc
aggaactacccagatacattctggaccaaccctcagttccgcctgtgtctcttggaggag
gatgatgactcagaggacaacgaggtggcgtgttccttcgtggtctctctgatgcagaag
aacagacggaaagagaggaagttgggagccaatctcttcaccatcggatttgccatctac
gaggtgccgaaggagatgcacggaaacaagcagcacatgcagaaggacttcttcctgttc
aactcatccaaggctcgctgcaagtcctacatcaacctgagggaggtgacccagcgcttc
cgtctgagccccggggagtacgtgatcgtcccgtctacctacgagcctcaccaggaggga
gagttcatcctcagagtcttctccgaaaagaggaacacctcagaggagatagagaacagg
atcgaggcggaccatacagtgccggccccagccaatgcgggggaggagagtgaggaggac
cagcagtttcggagcctctttcagcagatagccgcggatgtgagtacggaaatggaagtt
accgccaacgagctgaagaatgtcctcaacagggttgtctccaaacataaggacctgaac
acagagggttttagcctggagtgctgcaggagcatgattgcactcgtggacgtatcctct
atggatgggacgggcagactcagcctgcaggagttcagacatctctggaacaagatcaaa
cagtggcaggggatctttagacactacagctcggaccaggctggcatcatcaacagctac
gagatgagaaatgccatcaacgatgcaggcttccgtctcaacaaccagctgtatgacatc
atcaccatgcgttacgccaatgagggtatgaacatcgactttgacagcttcatcagctgt
ctggtccggctcgaagccatgttcagggcgttccaggcttttgatcaggatggtacgatc
agacttagtgtcttggagtggctccagctgactatgtatgcctag
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