Oncorhynchus gorbuscha (pink salmon): 124046835
Help
Entry
124046835 CDS
T07892
Symbol
atrn
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ogo04091
]
124046835 (atrn)
Lectins [BR:
ogo04091
]
C-Type lectins
Others
124046835 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
EGF_LMN_ATRN
Kelch_5
Kelch_4
Kelch_2
Kelch_6
CUB
PSI
EGF_TEN
NANM
EGF_Teneurin
PSI_integrin
EGF_laminin
EGF_2
TMEM100
DOMON
Motif
Other DBs
NCBI-GeneID:
124046835
NCBI-ProteinID:
XP_046223571
LinkDB
All DBs
Position
LG10:complement(99615622..99874018)
Genome browser
AA seq
1392 aa
AA seq
DB search
MDGAIRRRACCDAGRSRSLTSGLVEVGGRGSMLQTLLLFSVFGLLFGLPAVTEAKECDKT
CMNGQCNTVTGNCVCSPGWIGDQCQHCGGRFRLTGPSGFLTDGPGNYKYKTKCTWLIEGT
PNSILRLRLDHFATECSWDHLYVYDGDSIYTPLLAAFSGLIVPERYGNETVPEVVSQSGY
ALLHFFSDAAYNLTGFNISYSVNTCPNNCSGRGECRVGNSTGAVYCDCESNWKGEACDVP
YCLSDCGWPDRGHCLQDTKICRCQSGWQGPDCSVSVPANSSFWQREEYPEPGLARASHKA
IVDQGIMWVIGGYVFNSSDYQMVKAYNLSSHRWLSLNRSVNSVMGRYGHSLALHEGKIYM
YGGKIDSTGNVTSQLWVFHIQNQTWVSLSARAQEQWAVVGHSAHVVPPLLEGGSPVMLVL
FGHCPLYGYISQVQEYNFARNTWRAVVTDGALVQGGYGHSSVFDPSSRAIYIHGGYKAFS
ANKYGLSGDLYKYDLDRSRWTVLKDSGFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAK
CFSSDFMAYDLACDEWSVLSRPDLHHDVNRFGHTAIYSDRVMYVFGGFNSLLLSDILMYT
PASCSSAPSAAVCAATWLGVHCLWNATLGTCLPWDSNPGFLDEQTALASCGTRTYVDNDR
CDQYTDCYSCTANTNGCQWCAVQCVSVSSNCTAVTGAIVEYGICPKDNPSYVCNKKTSCK
SCGVDQNCQWEPRNQECISLPENICGENWHLVGNSCLKFITAKDSYDNAQLTCRGHNAVL
ASLTNQKMVDFVLKELQIMSVLVSKYKASVTPWVGLRKINVSYWCWEDMSPFTNTSLQWL
PGEPSDAGFCGYLAEPASSGLKAQTCINPVNGSLCERAANHSAKQCRTACAMRATCAECT
SSSSECMWCSNMRQCVDSNAYVASFPFGQCMEWYTMNSCPPENCSGYRTCGQCLEQPGCG
WCTDPSNTGRGQCIEGSYRGPFQTAVPAPSTLPGPASSPASQPALNISMCPYDTKYNWSF
ILCPACQCNGHSQCVNHSVCEKCEDLTTGRHCESCISGYYGDPTNGGSCQPCKCNGHAGV
CNPNNGKCFCTTKGIKGDRCHLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYY
TAINFVATPEEQNRDLVVFINASKNFNLNITWAASFTVGTQTGEEIPIVSRSNIKEFKDS
FSNENFDFRNNPNITFFVYVSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVA
AVVWKIKQSCWASRRREQLLREMQQMASRPFATINVALETDEEPPDLIGGNIKTVPKPIA
LEPCFGNKAAVLSIFVRLPRGTGGIPPPGQSGLTVASALVDVSQQMCLGYKEKSCGLRNR
KHHPSAQPSTCI
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggacggagcgatacggcggagggcctgctgtgatgctggccgcagccggagcctgacc
agcgggctggtggaggttggtggccggggctcgatgctccaaacactgctccttttctcc
gtgttcgggctgctctttggacttcccgctgtcaccgaggcgaaagaatgcgacaaaacg
tgcatgaatgggcaatgcaacacggtaacgggcaactgtgtgtgcagccccggctggatc
ggggaccaatgccaacactgcggaggaaggttcaggttgacgggcccctcagggttcctg
acagatggaccaggaaactataagtacaagaccaagtgcacctggctcatagagggaacg
cccaacagcatcctgagactgaggttggaccactttgctacagagtgcagctgggaccac
ctgtatgtgtacgatggagactctatctacactcctctactggctgccttcagtgggttg
atagttcctgagcgctatggcaacgagacggttccggaagtggtgtcacagtccggttac
gccctcctccacttcttcagcgacgctgcctataacctgactggcttcaacatctcatat
agtgtgaacacgtgtcctaacaactgttctggccgaggggagtgtcgcgttgggaactca
acaggtgctgtttattgtgactgtgaatccaactggaagggcgaggcctgtgatgtccct
tactgcctgtcagactgtggttggcctgacaggggacactgccttcaggacacaaagata
tgtcgatgccagtctgggtggcaaggtccagactgctctgtgtccgtcccggccaactct
tcattctggcagcgggaggagtaccctgagccggggctggccagagcttcccacaaggcc
atagtggaccaggggatcatgtgggtcatcgggggttatgttttcaactcctcagactac
cagatggtcaaagcgtataacctcagctcccatcgctggctgtctctcaaccgctctgtc
aactccgtcatgggacgatacggacactctctggcactacatgagggaaagatctacatg
tacggagggaagatagactctactggcaacgtgaccagccagttgtgggtgttccacatc
cagaaccagacctgggtgtccctctctgcccgagcccaggaacagtgggccgtggtggga
cactctgcccacgtagtaccccccctgttggaggggggtagtccagtcatgttggtgctg
ttcggacactgtcctctatacgggtacatcagccaggtgcaggagtacaactttgctagg
aacacgtggcgtgccgtggttacagatggagccctggtgcagggagggtacggccacagc
agtgtgtttgacccctcctcccgggccatctacatccacggagggtacaaggccttcagc
gctaacaagtacggcctgtctggagacctgtacaagtacgacttggaccgcagccgatgg
acggttctaaaggacagcgggttcttccggtacctccacacggcggtcatcgttagcgga
accatgctggtgtttggagggaacactcacaacgacacgtccatgagccacggagccaag
tgcttctcctcggacttcatggcctatgacctggcatgtgatgagtggtcagtgctgtcc
agaccagacctccaccatgatgtcaaccgcttcggacacacagccatctacagtgacaga
gtaatgtacgtgttcgggggatttaacagtctcctgctgagtgacattttgatgtatacg
ccagccagctgctccagcgctcccagcgctgccgtctgtgcagcaacctggctgggagtt
cactgcctctggaatgctaccttagggacctgcctgccttgggactcgaaccccggattc
ctggatgagcagaccgccttggcctcctgtggaaccagaacatatgttgacaacgatcgt
tgtgaccagtacacggactgctacagctgtacagcaaatactaacggctgccagtggtgt
gctgttcagtgtgtctccgtgagctccaactgcacggccgtcacgggggccatagtggag
tacggtatctgccccaaagacaacccgtcttatgtctgcaacaagaagaccagctgtaag
agctgtggtgtggaccagaactgccagtgggaacccagaaaccaggagtgtatctctcta
cctgagaatatatgtggtgagaactggcacctggttggtaactcatgtctgaagttcatc
acagccaaggactcgtatgataatgcacagctgacctgtcggggtcacaacgccgtcctg
gcctcactgaccaatcagaagatggtggacttcgttctcaaggagctgcagatcatgagc
gttctggtgagcaagtacaaggcctcggtgacgccgtgggtggggctgaggaagatcaac
gtctcctattggtgctgggaagacatgtcacccttcacgaacacctccctccagtggttg
ccgggggaacccagcgacgccggtttctgtggttacctagcagagccggcttccagcggt
cttaaggcccagacctgcatcaaccctgttaacgggagtctgtgtgaacgagcagccaat
cacagtgccaagcagtgtcggacggcgtgcgccatgcgggctacatgtgctgagtgtacc
agcagcagctctgagtgtatgtggtgcagcaacatgaggcagtgtgtggactctaatgca
tacgtagcctccttccccttcggacagtgtatggagtggtacactatgaacagctgtcca
cctgagaactgttctgggtacaggacgtgtggccagtgtctggagcagccgggctgtggc
tggtgtacagatcccagtaatactgggcgtggccagtgcatcgaggggtcctatcggggg
ccgttccagaccgctgtccccgccccctccaccctgcctggcccagcctctagtcccgcc
tcccaaccggctctcaacatcagcatgtgtccttacgataccaagtacaactggagcttt
atactctgtccagcgtgccagtgtaacggccacagtcagtgtgtgaatcacagtgtatgt
gagaagtgtgaggacctgacaacaggacgccactgtgagagctgcatctctggttactat
ggagaccccaccaacgggggcagctgccaaccgtgtaagtgtaatggccatgccggtgtg
tgtaacccaaacaacgggaagtgtttctgcaccaccaagggcatcaaaggagaccgctgt
cacctgtgtgaggtggagaaccgttaccaaggaaaccctctgaaaggaacctgttactac
accctgctgatagactaccagttcaccttcagtctgtctcaggaggacgaccgctactac
accgccatcaactttgtagccacacctgaggagcagaatcgtgatctggttgtgttcatc
aacgcctccaagaacttcaacctcaacatcacctgggccgccagcttcacagtaggtacc
caaacgggcgaggagatccccattgtctccaggagtaacatcaaggagtttaaagacagt
ttctccaacgagaactttgacttccgcaacaacccaaacatcaccttcttcgtctatgtc
agcaacttcacctggcccatcaagatacaaattgccttctctcagcacagtaacttcatg
gatctggtgcagttcttcgtcacgtttttcagctgtttcctgtccctcctcctggttgca
gcagtcgtctggaagatcaaacagagctgctgggcgtcacggcgacgtgagcaactcctc
cgtgagatgcagcagatggctagccggccgtttgccaccatcaacgttgccttggaaacg
gacgaggagccacccgacctgattggtggaaacatcaagacggtgcccaagcccatcgcc
ctggagccctgttttgggaacaaggccgctgtcctctccatctttgtccgtttacccaga
ggcaccgggggcatccccccgcccggtcagtctggtctaacggtggcctcggccctggtg
gatgtgtctcagcagatgtgtcttggttacaaggagaagtcatgtggtctgaggaacagg
aagcatcacccctctgcacagccctccacctgtatctga
DBGET
integrated database retrieval system
