Oncorhynchus gorbuscha (pink salmon): 124047533
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Entry
124047533 CDS
T07892
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124047533
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124047533
BRITE hierarchy
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GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_1
ig
fn3
Ig_2
LRR_14
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
124047533
NCBI-ProteinID:
XP_046223797
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Position
LG11:complement(8837421..8842046)
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AA seq
659 aa
AA seq
DB search
MVQGFSLCFCLALLCLGRCVCSTCPFQCSCFFHKLSDGSKARSVLCNDPEITLIPPNFPT
DTSKLRIEKTAITRISSETFHYLNRLELLCISFNSLNSLNVDSFRGLRSLDELRLEGNAL
TSFPWESLTDMPDLRLLDLHNNKISSIPAEAAIYIKNLTYLDLSSNSLVTVPPEVLFTWL
SVKPSQADGESSKYILGLHDNPWLCDCRLYDVVQFQKSPSTSVTLIDTRLHCADPESLSG
VSFSETELRKCQEPRVHTAVARVRSSLGNNVLLRCGTIGVPVPELSWTRADGKQMNGTVQ
EEVSKEGIIWSILSVRAVSYRDSGKYICKATNFLGTADAIISLVITDSLKNEEQVGSSKT
RKQKGRKTGGFGKAAYQDKLVAKYIPPPTTTAATPIIEPLGPGGFTGQYDIESYDISNSV
VDGQAPGPPITETAMQEVEKEVLSNLAANASSLQAPAPPEKRVVRSVKIIGDTDHTVSLN
WRAPAAKNTTEFSVLYAVFGERDMRRINVAAGKNRIIIEGLVPRTKYIACVCVKGLIPKK
EQCVIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCKKLLGRKSKDI
QESYVTFETLSPGQNPKGMEGESLARQQPDESNRLLSARCSVDSEAICRTEGPPNEYFC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaggttttagtctgtgtttctgcttggcattactttgcctcggacggtgtgta
tgcagcacgtgtccgtttcaatgtagctgtttctttcacaaactatcggacggatccaaa
gcaaggagtgtcctttgcaatgacccagagatcactctgatcccacccaactttcctaca
gacacctcgaaactgcggatcgagaagactgccatcacaaggatctccagcgaaaccttt
cactacctcaaccgtttggaattgctctgcatttctttcaactctctgaactctttgaat
gtagacagcttccgtggcctgagaagtctggatgagctgagactggaagggaacgctctc
acctctttcccctgggaatctctgactgatatgcccgacctgaggctactggacttgcat
aataataagatatcgtcgatcccggccgaggcggccatctatatcaagaacttgacctac
ctggacttatctagcaacagcctagtcacggttcctcctgaggttctctttacgtggttg
tctgtgaaaccatctcaagcagatggggaaagttccaaatatattctaggtctccatgac
aacccgtggctgtgcgactgccggctctatgacgtggtccagttccagaagtctccatcc
acatccgtgactctgatcgacaccaggctgcactgcgcggacccagagagcctgtcgggg
gtgtcgttcagcgagacggagctccggaagtgccaggagccccgtgtccacacggctgtg
gcccgggtcaggagctccctggggaacaacgtcctgctacgttgtgggacaatcggagtc
ccagtaccagagctgtcctggacccgggcagacggcaaacagatgaacggcactgttcag
gaagaagtttcaaaggagggaatcatttggtccatcctgagtgttcgtgccgtctcttac
agggactctgggaaatacatctgcaaagcgaccaacttcctggggactgcagatgccatc
atctccctagttatcacagactccttaaaaaatgaggaacaagttggcagctccaagact
agaaaacaaaagggacggaaaaccggtgggtttgggaaagctgcctaccaggataaactt
gttgcaaaatacatacctccaccaaccaccacggcagccacgcctatcatcgaaccacta
ggaccgggcggttttacaggacagtatgatatcgagagctacgatatctccaacagcgtg
gttgacggacaggcgcccggtcctcccatcaccgagacggcgatgcaggaagtggagaag
gaggtccttagcaacctagcagccaacgcctcttctttacaggcgccggcaccaccggag
aaacgggtggtgcgttcggtgaagataatcggggacaccgaccacaccgtctccctgaac
tggcgggccccggcggccaagaacaccaccgagttcagcgtcctgtacgccgtgttcggc
gagagggacatgcggaggatcaacgtcgctgcgggaaagaaccggatcattattgagggc
cttgtgccaaggacaaagtacatcgcctgcgtctgcgtcaaaggcctgatccctaaaaag
gagcagtgtgtaatcttctcaacggacgaggcggccagcgcaagcggcacccagaagctc
attaacgtggtggtgatcaccgtggcctgcgtgatcgctgtccccctgacactgatcgtc
tgctgcggggcgctcaagaagcgctgcaaaaagctactggggagaaaatccaaagatatc
caagaatcgtatgtgacattcgagaccctctccccgggacagaaccctaaggggatggag
ggggagtcccttgccaggcaacagccagacgagtccaacagactgctctctgctaggtgc
agtgtggactccgaggccatttgtaggactgagggaccgcctaacgaatacttttgttga
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