Oncorhynchus gorbuscha (pink salmon): 124047558
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Entry
124047558 CDS
T07892
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ogo04054
]
124047558
Pattern recognition receptors [BR:
ogo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124047558
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PYRIN
PRY
NOD2_WH
LRR_6
SPRY
Motif
Other DBs
NCBI-GeneID:
124047558
NCBI-ProteinID:
XP_046223826
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All DBs
Position
LG11:complement(14670923..14676555)
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AA seq
1131 aa
AA seq
DB search
MATSVPDLLLAILEELVGNDLKKFHWYLAQSVPDGFPLIPKGHLENADRQDTVDTMVNTY
GHDVAMKISLEILRKMNQKDLSKMLTVDQQEAEVEVAAASIRVPESPVYITCTAQTGGHV
VAPSLSGCHIGGPVHFNIRVNSLDEDPVVPSQASPAQFTMFPPEPVNTEDNDERIESCQK
KLKHNLHSRFVSVFEGLASHGNRKLLNQIYTELYITEAGSTEVNSEHEVRQIETASRRTA
IQETPIQCNDIFQPFLDQSIRTVLTKGVAGIGKTVSVQKFILDWADGKANQNLQLIFPLS
FRELNLVRKKRCSLIELLNGFFTETKETEISNYDNYQVLFVFDGLDECRLPLDFQNNDIL
FKITESTSVDVLLTNLIRGNLLPSAQLWVTTRPAAANQIPPECVDKVTEVRGFNDPQKEE
YFRNRISNENLASRIITHIKTSRSLYIMCHIPVFCWISAIVLERKLEKAGSGEMPKTLTQ
MYSHFLAFQEKDMDLRLQGRGTPDPDWMRKSIMSLGKLAFQQLEKGNLIFYEEDLRECGI
HIGQASVYSGVCTEIFSEELTLCQGKVFCFVHLSIQEFLAALYVFLTFINDNVNLLAKQQ
SFLSRFQFGNSSSTSFYKAAVDKALQSENGHLDLFLRFLLGLSLESNQILLRGLLTQKTS
RSQTNKESVKYVKEKIKENPSPERCINLFHCLNELHDHSLVEEIQSYLGSGTLSRAKLSP
AQWSALVFVLLTSEEELDEFELKKYSRSEEGLLRLLPVVKASRTALLSRCKLTERCCEAL
ASALSSHSSHQRELDLSHNDLQDSGVKLLSAGLASPQCKLETLRLRRCKLTERCCEALAS
ALSSNSSHMRELDLSDNNLQDSGVMLLSAGLGSPHCKLKVVRLSLCSVTEEGCALLASSL
NSNPSHLRELDLSYNYPGDSGMKLLSAVLKDPHCKLEKLSVECCAEFRIRPGPQRYACEL
TLDPNTAHKELSLSEENRKVTRGKEQPFPDHPERFDYWRQVLCREGLDGRCYWEAECSGR
ALMGVSYRGISRRGEGHDCWLGRNAVSWSLNCSNDSYTAWHNDKSTGITTPSLSNRVGVY
LDWPAGTLSFYSVSSNTLTHLHTFHSTFTEPLYPGFRLGWVDSSVSLCQVE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatctgttcctgacctactactggctattctagaggagctggtaggaaacgat
ctgaagaaatttcactggtacctggctcagagtgtaccagatggctttcctctcatcccc
aagggccatctggagaacgctgacaggcaggacaccgtggatacgatggtgaacacctat
ggccacgatgtagctatgaagatctcactggagatcctgaggaagatgaaccagaaggac
ctcagcaagatgttaacagtggatcagcaagaggctgaggttgaggtagcagctgcctca
attcgggttccagaatctcctgtctacatcacttgtacagctcagactggcggccatgtt
gtggccccttcgctctccggctgccacatcgggggtccagttcacttcaacatcagagtc
aactcattagacgaagatcccgtagttccatctcaagcttcacctgcccaatttactatg
tttccacctgaacctgtgaatacagaagacaatgatgaacgaatagagagttgtcaaaag
aaactcaaacacaatctgcacagtaggttcgtcagtgtgtttgagggactggccagccac
gggaacagaaaacttctcaaccagatctacacagagctctacatcacagaggctggaagt
actgaggtcaatagtgaacatgaggtgagacagattgagacggcatccagaagaacagcc
atacaagaaacaccaatccaatgcaacgacatctttcagcccttccttgatcaatccatc
agaactgtgctgacgaagggagtcgctggcatcgggaaaaccgtctcagtgcagaagttc
attctggactgggcagatggaaaagccaatcaaaatctccagttgatattccctctttca
tttcgagagctgaatttggtcagaaagaaaagatgcagtttgatcgaacttctcaatggc
ttttttacggaaacaaaagaaaccgagatatcaaactacgacaattatcaggtgctgttt
gtctttgatggtctggatgagtgtcgacttcctctagacttccagaacaatgacattctg
tttaaaataactgagtcaacctcagtggatgtgctgctaacgaacctcatcagggggaat
ctgcttccctccgctcaactctgggtaaccacccgacctgcagcagccaatcaaatccct
cccgagtgtgttgacaaggtgacagaggtaagagggttcaatgacccgcagaaggaagag
tacttcagaaatagaatcagcaatgagaacctggccagcagaatcatcacacacataaag
acatcaaggagcctctacatcatgtgccacattcccgtcttctgttggatctcggccatt
gttctggagagaaagctggagaaagcagggagtggagagatgccaaagaccctgactcag
atgtactcacacttcctggcttttcaggagaaagacatggatctcaggcttcagggaaga
ggaacacctgaccctgactggatgagaaagagcatcatgtccctgggaaaactggctttc
caacaactggagaaaggcaacctgatcttctatgaggaagacctgagagagtgtggcata
cacatcggccaggcatcggtgtactcaggagtgtgtactgagatcttcagtgaggaactg
accttatgccagggaaaggtgttctgctttgttcatctcagtattcaggagtttctggct
gccctgtatgtgtttctcacattcatcaacgacaacgtgaatctattagccaaacagcaa
tcatttctgagtcgttttcaattcggaaattcatcctcaaccagcttctacaaagcagca
gttgacaaggccttacagagtgagaatggacacctggacctgttcctccgcttccttctg
ggcctctcactggagtccaatcagattctcctacgaggcttgctaactcagaaaacaagt
agatcacagaccaacaaggaatcagtcaagtacgtgaaggagaagatcaaggagaatccc
tctccagagagatgcatcaatctgttccactgtctgaatgaactgcatgaccattctcta
gtggaggagatccaaagctacctgggctcaggaactctctctagggccaaactctcacct
gcacagtggtcagctctggtctttgtgttgctgacttcagaagaggagctggatgagttt
gagctgaagaaatactccagatcagaggagggtcttctgagactgctgccagtggtcaaa
gcctccagaacagccctactgagtcgatgcaaactcacagagagatgctgtgaagcgttg
gcctcagcactcagctcacactcctcacaccagagagagctggacctgagtcacaacgac
ctacaggattcaggagtgaagcttctctctgctggactggcaagtccacagtgtaaactg
gaaacgttaagactgaggcgatgcaaactcacagaaagatgctgtgaagcgttggcctca
gctctcagctcaaactcttcacacatgagagagctggacctgagtgacaacaacctgcag
gattcaggagtcatgctgctctcggcaggactgggcagtccgcactgtaaactgaaggtt
gtaaggttgtcactttgtagtgtcacagaggaaggctgtgctttgctagcctcctctctc
aactccaacccctcacacctgagagagctggacttgagctataattacccaggagactcg
ggaatgaagcttctctctgctgtactgaaagatccacactgtaaacttgagaaacttagt
gtggagtgctgtgctgagttcaggatcagaccaggaccacagagatatgcctgtgaactc
acactggacccaaacacagcacacaaagaactctcgctgtctgaggagaacaggaaggtg
acgcgagggaaagagcaaccgtttcctgatcacccagagagatttgactactggaggcag
gtgctgtgtcgggaaggtctggatgggcgctgctattgggaggcagagtgtagtgggagg
gccctgatgggagtatcttacagagggatcagcaggagaggagagggacatgactgctgg
ttgggacgaaacgctgtgtcctggagtctgaactgctctaatgacagttacacagcctgg
cacaacgacaagagcactggcataaccaccccctctctctctaacagagtaggagtgtat
ctggactggccggccggcactctgtccttctacagtgtctcctctaacacactgacccac
ctgcacacgttccactccacgttcactgagcccctctatccagggtttaggctaggctgg
gtggactcgtccgtgtccttgtgtcaggtagaatag
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