Oncorhynchus gorbuscha (pink salmon): 124047651
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Entry
124047651 CDS
T07892
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124047651
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
124047651
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
124047651
NCBI-ProteinID:
XP_046223921
LinkDB
All DBs
Position
LG11:complement(36575541..36644660)
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AA seq
1401 aa
AA seq
DB search
MYFLTGWPRRLLCPLKSEEEPFHIKPNSQRFYFAMLSETQLSIWFSRPSVLIVSYIESVK
AAAQFGFYQQAEWKPDDSMIAVAAANGYILMFDVVGGGEDKYLYEPVYPKGSPRVKVTPG
YKEEQCAPALSLEMKRPIDLEAPITSIKSLQEDLLVSTADGYLHILHWDGVSNGRKAISL
CTVPFSLDLQSARGGPSLDLEGLYIRDMEYCVTLDGFAVVLDDGRLGFISPVAGRFTAEV
RERSLCVCDFATLNICLSLCLCSSGSVLVYMIDTTTGSMQLSHKLELTPKHFPDVWNKTG
AVKLIRWSPDYSVAMVTWECGGLSLWSVFGAHLICTLGEDFAYRSDGTKKDPIKISSMCW
GAEGYHLWVITSREEAELVENMEGAPPPTQTMQAGILQFHFIKSALTVNPCTSNQEQVLL
HGEDRLYLTCGDPTQVPSSSSDGPQTPHPHNLAHGLEGNPLHHRSAPSSNSISQGLSTLL
GHKHWHVVQIHSTYLESNWPIREQNMTVTGGLAWWNDFVVVACYNFTDRQEELRLYLRSS
NLDNAFASVTKLHSDTLLLNVFRDLIVLFRADCSIFLYSIERRHDGPNPSACVELLQEVS
MSRYIPHPALVVSVTLTSVRTETGIALKAPQQACMAESIMLNLAGQLIMLQRDRSGPQVR
EKEDQKKLLPFCPPVVLAQCVENVWTTCRSNKKKRHLLEALWLSCGEAGMKVWLPLFPRD
HRKPHSFLSRRIMLPFHINIYPLAVLFEDALVLGASNETVLYDGLQGPREGREPLEVTFP
YCTVERTSQIYLHHILRQLLVRNLGEQALLLAQSCAALPYFPHVMELMVHVVLEEEATSR
EPIPDPLLPTVAKFITEFPLFLQTIVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDL
DTAASYLIILQNMEVPAVSRQHATLLFNTALEQGKWDLCRHMIRFLKAIGSGEMETPPPT
PTTQEPSSTGGFEFFRNRSISLSQSADGIAAGKFNLQKTFSMPSGPSTKGSERWSKDSDC
AENMYIDMMLWRHARHLLEQVRLKDLGCFSAQLGFELIGWLCRERTRVARLDDFVMALKC
LHKDFLWPFPVIPACSTSSPFKDGQRKTVLSQRLLKSQSADSLLNSDMDTAPPQASARNS
NHTWLDGLGALGPEPKEMNTSSSHGGPQTQEAFLSPLTNKTEECSIGSATDLTETSSMVD
GDWTMVDENFSTLSLTQSELEHISMELANKGPHKSQVQLRYLLHVFMEAGCLEWCVVIGL
ILREATVIKQVVNFLDSPEVPPETVQSIRSGLLEVDAWASTDCLGYKPFLNLIRPQLQKL
IETAVEQVQPEAFQSGASNPNSKLTEPQPGCPRAEDSRGPAPLGLALPSEPSGGLVTEDG
GAPEEQEEQAADEGAYDCTLS
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgtattttttaactggctggccccggaggctactttgtccactgaaaagtgaagaggaa
ccgtttcatattaagcccaattcacagaggttttacttcgccatgttgtcagagactcaa
ctaagtatctggtttagtcggcccagtgttctgatagtgagctacatagagtcagtgaag
gcagcagcccagtttggcttctatcagcaggccgaatggaagccggacgattccatgata
gcagtggcggctgccaatggctacatcctcatgtttgacgtggtgggaggaggagaggac
aagtatctttatgagccagtctatcccaaagggagtccgcgtgtcaaggtcaccccaggt
tataaagaagagcagtgtgcccccgctctcagcctggagatgaagagacccatagatctg
gaggctcccatcaccagtattaagtctcttcaggaggacttgttggtgtctacagctgat
ggctacctccacatcctccactgggacggagtcagcaatggccggaaggctatcagtctc
tgcaccgtccccttctccctggaccttcagtcggcacgcggtggtccgtctctggatctg
gaggggctgtacatcagagacatggagtactgtgtgactctggatggctttgctgtggtg
cttgacgacgggaggctgggattcatcagtcctgtagccggccggtttaccgcggaagta
agagaaagaagtctgtgtgtgtgtgattttgctactctgaacatttgtctctctctctgt
ctctgttccagtggctcagtattggtgtacatgattgacaccaccacaggatccatgcag
ctctcccacaagctggagctcaccccaaaacacttccctgacgtgtggaacaagaccggc
gcggtgaagctgatccgctggtcccccgactacagcgttgccatggtgacctgggagtgc
ggcgggctgtctttatggagtgtgtttggagcacacctcatctgtacactcggggaggac
tttgcgtatcggtcagacggcacgaagaaggatcctataaagatcagctctatgtgctgg
ggagcggaaggctaccacctgtgggtcatcaccagtagagaggaagcggagcttgtagag
aacatggagggggctccacctcctacccagaccatgcaggcggggatactgcagttccac
ttcatcaaaagcgccctcaccgttaacccctgcacgagtaaccaggagcaagttttacta
catggggaagaccgtctgtacctgacctgtggtgaccccacccaggtcccatccagcagc
tccgatggccctcaaacccctcacccccacaatctcgcccatggcctggagggcaacccc
cttcaccatcgctccgccccctcatccaactccatctctcagggactcagcactttactg
ggacacaagcactggcatgtggtccagattcacagcacatacctagagagtaattggcct
atacgggagcagaacatgaccgtgacaggggggctggcctggtggaacgactttgtcgtt
gttgcctgttacaatttcaccgaccggcaagaagagctgcgtctgtacctccggtcgtcc
aacctggacaatgccttcgcctccgtcaccaagctgcactctgacaccctgctgctcaac
gtgttcagagacctgatcgtcctcttcagagcagactgctccatcttcctctacagcatc
gagaggaggcacgacgggcccaacccgtcagcctgtgttgagctgcttcaggaggtgtcc
atgtcccgctacatcccccatcctgccctggtggtgtctgtcaccctcacctcggtgcgc
acagagaccggcatcgcgcttaaagccccacagcaggcctgtatggcagagagcatcatg
ctgaacctggctggccaactcatcatgctacagagagaccgttctggaccacaggtacga
gagaaggaagaccagaagaaactgctgccgttctgtcctcccgtggttctggctcagtgt
gtagagaatgtgtggacgacgtgtcgcagtaacaagaagaagcgccacctgctggaggct
ctttggctgtcctgtggcgaggccggaatgaaggtgtggctgcccctgttcccgcgggac
caccgtaagccccactcgttcctgtcccggcgcatcatgctccccttccacatcaacatc
taccccctggccgtgctgtttgaagatgccctggtgctgggggcatctaatgagacagtg
ctctacgacggcctgcagggtcccagagagggccgggagcctcttgaggtgacgttccct
tactgcacggtggagaggacctcccagatctacctccaccacatcctgcgccagctactc
gtgcgtaacctgggagagcaggccctgctcctggcccagtcctgcgcggcgctcccctac
ttcccccacgtcatggagctcatggtccacgtggtgctggaggaggaggccacctcccgg
gagcccatccccgaccctctgctgcccaccgtggccaagttcatcaccgagttccccttg
ttcctccagaccatcgtgcactgtgccaggaagactgagtatgccctgtggaactacctg
tttgctgccgtgggcaaccccaaggatctttttgaggaatgtctaatggctcaggacctg
gacacagcagcatcctatctcatcatactgcagaacatggaggttccggcagtgagcagg
cagcacgctaccctgctcttcaacacggctctggagcagggcaagtgggacctctgtcgt
cacatgatccgattcctcaaggccattggctctggggagatggagaccccgcctccaaca
ccaaccactcaggaacccagttcgacgggaggcttcgagttcttcaggaaccgcagcatc
agtctgtcccagtcagctgacggcattgctgctgggaagtttaacctacagaagaccttt
agcatgccctccgggccctccactaaagggtctgagcgatggagtaaggacagtgactgt
gctgagaacatgtacatagacatgatgttatggcgtcacgcccggcacctgctggagcag
gtccgcctcaaagacctaggctgtttctccgcccagctgggcttcgagctgattggctgg
ctgtgccgcgagcgcacccgggtagcgcggctcgatgactttgtcatggcgctgaagtgt
ctccacaaggacttcctctggccgtttcctgtcatcccagcgtgctcgaccagctcgccc
ttcaaggacggacaacgcaagacggtgctgagccagcggctgctaaagtcccagtcagca
gacagcctgttgaacagtgacatggacacagcgcccccgcaggcctcagcacgcaacagc
aatcacacctggctggacggtctcggggcgctggggccggagcctaaagagatgaacaca
tcctcttcccacggggggccacagacacaggaggccttcctctctccactcactaacaaa
acggaggagtgcagtatcggttcggccacagacctgacagagaccagcagcatggtggat
ggagactggaccatggtggatgagaacttttccactctgagtctgacccagtctgagctg
gaacacatctccatggagctggctaacaagggaccacacaagtctcaggtccagctacgc
tacctgctgcatgtgttcatggaggcgggctgtctggagtggtgtgttgtgattggtctg
atcctgagagaggccacggtcatcaagcaggtggtcaacttcctggacagcccagaggtt
cctcctgagactgtccaaagtatccgctccggcctgctggaagtcgatgcgtgggcctcc
acagactgcctgggctataaacccttcctgaacctgatccggccccagctgcagaagcta
atagagactgctgtggagcaggtccagcctgaagccttccagtcaggggcttccaacccc
aactccaagttgactgagccccagcccggatgccccagggcggaggacagtagagggcct
gctcccttgggcctggccctgccctcggagccctctggagggttagtgacagaggacgga
ggagctccagaggagcaggaggagcaggcggccgacgagggggcgtatgactgcaccctg
tcctga
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