Oncorhynchus gorbuscha (pink salmon): 124047760
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Entry
124047760 CDS
T07892
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124047760
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124047760
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_1
Ig_3
fn3
ig
Ig_2
LRR_5
C2-set_3
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
124047760
NCBI-ProteinID:
XP_046224026
LinkDB
All DBs
Position
LG11:33148034..33167665
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AA seq
650 aa
AA seq
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MFLAFVLGLYLATGALPSSVSACPSQCSCFFHNLSDGSMARSVICNDPEISIVPASFPVD
TSKLRIEKTAIHRIPSEAFSYLPNLEFLWMSFNVLSSLKPDSFRGMLNLEELRLDGNALT
AFPWESLMDMSSLTLLDLHNNQLTSVPADATIYLKNLTYLDLSSNNLLTVPAEVLATWLT
VKPVQGPENSKIILGLHDNPWLCDCRLYDLVQFQKLPTFSVALIDTRLRCAAPESLSGVL
FSDAELRRCQAPRVHTAVAHVRSAVGNNVLLRCGTIGVPSPDLAWRRAEGKALNGTVQQE
NSKEGIIWSILKFPAVSYRDSGKYVCKATNYAGNAETIISLVVSDAPPKPDNNNNQTSVV
AATVKKNKVNKPNGMGKAAYQEKLVDRLLVPTPNPQPPPAVVDSSPEPEGVVVGSVADRA
TPGPAKLPSPDGLLELEKTNLSNLAQAQYDPDRIVRSVKVLGDTENTITLNWRAPKAKNT
TAFSVLYAVFGERDMRKINVAAGQNRVFIEGLVPKTKYIACVCVRGLIPKKEQCVIFSTD
EAASAAGTQKLINVIVITVACVIAVPLTVIVCCGALKRRIQKIWGKKSKDIQDSYVTFET
LSPGTKAKGLEGEYLTRLNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgcattcgtcttgggactctacctggcgacaggtgcgctaccctcctcggtg
agcgcgtgcccgtcacagtgtagctgtttttttcacaacctaagtgatggatctatggcc
aggagtgtaatttgcaatgaccccgagatctccattgtgcctgccagtttccccgtggac
acgtccaagctgcgaatcgagaaaacagccatccatcgtatcccgagcgaagccttcagt
tacctccccaatctggagttcctctggatgtccttcaatgtgctgtcctctctcaagccg
gacagtttccgtgggatgctaaatctggaggagctgcgactggatgggaatgccctcacc
gcgttcccctgggagtctcttatggatatgtccagcctcacgctgctcgacttgcacaac
aaccagttgacctcagttcccgcagacgccacaatttatttaaaaaacctgacctacctg
gatctgtccagcaacaaccttctgactgttccagctgaggtgctcgccacctggctaaca
gttaaacctgtgcagggcccagagaactccaaaattatacttggtctccatgacaacccc
tggctgtgtgactgtcgcctgtatgacctggtccagttccagaagttgccaacgttctct
gtggcattaatcgacacacgcctccgctgtgcagcccccgagagcctgtcaggtgttctg
ttcagcgatgccgagctgcggaggtgccaggcgccacgcgtccacacagcggtggcacac
gtccgcagcgccgtgggaaacaacgtgctgctgcgctgcgggaccattggcgttcccagc
ccggatctggcctggcgcagggcggaagggaaagccctgaacgggacagtccagcaggag
aactccaaggaaggcattatctggtccatcctcaaattcccagccgtgtcctaccgtgac
tcagggaagtatgtctgcaaggccactaactatgccggaaatgcagagaccatcatctcc
ctggttgtctctgatgctcccccaaaacccgacaataacaacaaccaaaccagcgtggtt
gctgctactgtaaaaaaaaacaaagtcaacaaacccaacgggatggggaaggcggcatac
caggagaaactggtggatagattactggttcccacccccaaccctcaacccccacctgct
gttgtggactccagccctgagcctgaaggtgtggtagtgggaagtgtggcagatagagcc
acccctggaccagccaagttgcccagtccagacggactcctggagctggagaagaccaac
ctgagcaacctggcccaggcccagtatgacccggaccggatagttcgctcggtcaaggtg
ttgggcgatacggagaacaccatcaccctgaactggcgggcgcccaaggccaagaacacc
acagccttcagtgtgctctatgccgtcttcggcgaaagagacatgcgcaagatcaacgtg
gcagcaggtcagaatcgggtcttcatcgagggcctggtgcccaagactaagtacattgcc
tgcgtgtgtgtccggggcctgatccccaagaaggagcagtgtgtcatcttctccaccgac
gaggcggccagtgccgctggcacccagaagctcatcaacgtcatcgtgattactgtggct
tgtgtcattgctgtgccactcaccgtaatcgtttgctgtggtgcgctcaagaggcgtatc
cagaagatttggggcaagaagtccaaggacatccaggactcgtatgtgacttttgagacg
ctgtcccccggaaccaaggctaaagggttggagggtgagtacctgaccagactcaatcct
gaggagtccaaccggctgctgtcggcccgatccagtctggactctgaggccacagcaaag
atagagggtcagcccaacgagtacttctgctga
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