Oncorhynchus gorbuscha (pink salmon): 124047910
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Entry
124047910 CDS
T07892
Symbol
otpa
Name
(RefSeq) orthopedia homeobox a isoform X1
KO
K24901
homeobox protein orthopedia
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124047910 (otpa)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
124047910 (otpa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124047910
NCBI-ProteinID:
XP_046224204
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All DBs
Position
LG11:complement(62864649..62870753)
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AA seq
334 aa
AA seq
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MLSHADLLDARLGELSSPNSGLQLYWMKDAAAELLGHREALKCRLGGGVGPDPGHSGELA
PGPDTVEGTTMLPGDDINNGGSNPSGVQANSKEQQDKQQQNNSSQSGGSQSQKQKRHRTR
FTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFR
APGTLLPTHHGLHSQFNSAAAAAAAMGDSLCSFHANDTRWATAGMPGVSQLQLPPALGRQ
HQHAMAQSLSQCSLSGPPPNSMGLSNMSSNGSGLQSHLYQNPFPGMVPASLSGPTNVTSS
PQLCSSPENDVWRGTSIASLRRKALEHTVSMSFT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgcacgccgacctcctggatgctcgcctcggtgagttatcgtcgccaaactcc
ggtcttcaactctactggatgaaggatgccgcggcagagctgctgggtcacagggaggct
ctgaagtgcaggctaggcggtggagttggacctgaccccggccactccggcgagctagcc
ccggggccagacaccgtggaggggaccaccatgctccctggagacgatatcaacaatggt
ggatccaacccttccggcgtgcaggccaacagtaaagagcaacaggacaagcagcagcag
aataactccagccaatccggaggaagtcagagtcagaaacagaagcgacaccggacccga
ttcactccagcccaacttaacgaactggagcgcagcttcgccaaaacgcactacccagat
atcttcatgagggaggaactggccctacggatcggcctaacggaatctcgcgttcaggtt
tggttccagaaccgacgcgccaagtggaagaagcgcaagaagaccaccaacgttttccgc
gctccgggaacgctgctgcccacccaccacggcctgcacagtcagttcaactctgctgct
gccgccgccgcggccatgggcgacagcctgtgctcctttcacgccaacgacacccgctgg
gcaacggcagggatgccaggcgtctctcagctgcagctccctccagccctgggtcgccag
caccagcatgccatggcgcagtccctgtcccagtgcagcctgtccggcccgccgcccaac
tccatggggctatccaacatgtcgtcgaacggatccggactccagtctcacctctaccag
aacccgttccccgggatggtcccggcctccctgtccggtcccaccaacgtgacgagttct
ccccagctgtgtagctccccggaaaatgacgtctggagagggacgagcatcgcctccctg
cggcgaaaagcgctggagcacacagtatccatgagttttacttag
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