Oncorhynchus gorbuscha (pink salmon): 124048045
Help
Entry
124048045 CDS
T07892
Name
(RefSeq) spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124048045
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124048045
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
124048045
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124048045
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
124048045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
MIT
Mg_chelatase
AAA_16
AAA_14
IstB_IS21
DUF815
nSTAND3
NPHP3_N
AAA_2
AAA_24
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
124048045
NCBI-ProteinID:
XP_046224383
LinkDB
All DBs
Position
LG11:complement(3316046..3334179)
Genome browser
AA seq
477 aa
AA seq
DB search
MSAKVRAGDSNDNGEIIRNYHKRAFEYISVALKIDEDDKGVKEEAVQWYQKGIAELQMGI
AIEVTGQGEHCDRSKRLQTKMINNLTMAKDRLALLEGTSASKTSHSPQSPPGHLPTPPVR
PAGPKNKPGPGPGHIKPASTGSSRTNNIKVVPRAAGRGLNGRPAASKEPQKRDMKNFKNV
DSKLASFILNEIVDGGSSVSFEDIAGQELAKQALQEIVILPALRPELFTGLRSPARGLLL
FGPPGNGKTMLAKAVAMESHATFFNISASSLTSKWVGEGEKLVRALFAVARELQPAIIFI
DEIDSLLCERREGEHDASRRLKTEFLIQFDGVQSEGAERVLVMGATNRPQELDEAVLRRF
AKRVHVALPTEETRFKLLKNLLGKHGHPLNQKELAHLAKMTGGYSGSDLTSLAKDAALGP
IRELGPEQVKNMAASDMRNICCKDFEDSLKRIKPSVSPTTLDLYIRWNTDYGDTTAF
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaaagttagggcgggggacagcaacgacaacggagaaatcattagaaactac
cataaacgagcatttgaatacatatccgtggcactaaagatcgatgaagatgacaaaggt
gtcaaggaggaggcagtacagtggtatcagaaaggcattgcagagcttcaaatggggatt
gctattgaagtcacaggacaaggagaacattgtgatcgttccaagaggcttcaaactaag
atgatcaacaatctcaccatggcaaaggaccgactcgctcttctagaaggtacatcggcg
tctaaaacgagccacagccctcagagtccaccaggccatctccctacccctccagtgagg
cctgctggtccaaagaacaagccaggaccaggaccaggacacattaagccagcaagcact
ggctcaagcaggaccaacaatatcaaggttgtccctcgggctgcagggagaggactgaat
ggtagaccagcagcatcgaaggaaccacagaagagggatatgaagaacttcaagaatgtg
gacagcaagttggccagcttcatactgaatgaaatcgtagacggtgggtcgtcagtgagc
tttgaagacatagcgggtcaggagctggctaaacaagctcttcaggagatagttatcctg
cctgcactcagacctgagctgttcactggtctcagatccccggcacgaggtctgctcctc
ttcggtcccccaggcaacggaaagactatgctggccaaagcagtagccatggagtcccat
gccaccttctttaacatcagtgcctccagtctgacctctaaatgggtgggagagggagag
aagctggtcagagctctgtttgctgtggccagagaactacagcctgccatcatcttcatt
gatgagatcgacagcctgctctgtgagagacgggaaggagaacacgatgccagccgacgt
ttaaaaacagagtttctcatacagtttgacggggtgcagtcggaaggtgcagagagggtt
ctggtgatgggagctacaaacagaccacaggagctggacgaagctgtgctcaggcgattt
gccaaaagggtgcatgtggccttaccaacagaggagacgcgtttcaagttgctgaagaat
ctattgggaaaacatggacacccactcaatcagaaggaattagcccatctagcaaaaatg
acggggggctattcaggaagtgatcttacatcgttggctaaggatgctgctcttggacca
atcagggaactgggaccagagcaagtgaaaaacatggctgctagtgatatgcgtaacatc
tgctgcaaggactttgaggattctctgaagcgtattaagcccagtgtcagtcccacaacc
ctggacctctatatacgatggaacactgactacggagacactacagccttctag
DBGET
integrated database retrieval system
