Oncorhynchus gorbuscha (pink salmon): 124048174
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Entry
124048174 CDS
T07892
Name
(RefSeq) polycomb group RING finger protein 5-B-like isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124048174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124048174
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
124048174
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_10
zf-RING_5
zf-Nse
zf-RING_6
Actin_micro
zf-rbx1
TRAF3_RING
zf-C3HC4_5
DUF1272
Motif
Other DBs
NCBI-GeneID:
124048174
NCBI-ProteinID:
XP_046224640
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All DBs
Position
LG11:16283056..16302480
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AA seq
237 aa
AA seq
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MTSPRKHLVKDFNHFITCYVCKGYLIKPTTVTECLHTFCKSCIVQHFEDSNDCPKCGIQV
HETNPREMLRLDNTLEEIIFKLVPGLREKEQQQEIEFWRSRKWKENGEEDGPRSKRSRLD
DDDDGGGGGDGDYHRSDPQIAICLGCCCVDSLVGESVVKGLMKKFIRCSTRVTVGTIKKF
LSLKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGETAYPMVLEYRPRIDFG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaccgagaaagcacctggtcaaggatttcaaccactttatcacatgctacgtg
tgcaaaggatacctgatcaagcccaccacggtgacagagtgcctgcacaccttttgtaaa
agttgcatcgtccaacactttgaagacagcaacgactgccccaaatgtggcatccaagtc
catgaaaccaaccctcgagagatgttaaggttggacaacactttagaggaaatcattttc
aaactcgttcctgggctaagagaaaaagaacaacagcaggagatcgagttctggaggagt
cgaaagtggaaggagaatggagaagaagacggcccccgatcgaagagatccaggctggat
gacgacgatgatggtggtggtggtggggatggagactaccacaggagtgacccgcagata
gccatctgtcttggctgctgttgcgtagacagtctggtgggagagagcgttgttaagggt
ttaatgaagaaatttatacgctgctcgactcgagtgacagtcggaacaatcaagaagttt
ctcagcttgaagttaaagcttccaagttcttatgagctagacgtcctatgcaacggggag
atcatgggaaaagaccacaccatggagttcatctacatgacgcggtggagacttcgcggt
gaaaccgcctacccaatggtactagaatatcggccacggatagactttggttga
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