Oncorhynchus gorbuscha (pink salmon): 124048225
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Entry
124048225 CDS
T07892
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124048225 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124048225 (vti1a)
Membrane trafficking [BR:
ogo04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
124048225 (vti1a)
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Sec20
Laminin_II
GTP-bdg_N
Motif
Other DBs
NCBI-GeneID:
124048225
NCBI-ProteinID:
XP_046224739
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All DBs
Position
LG11:19403900..19595951
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AA seq
224 aa
AA seq
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MSSDFEAYEQDFGTLTAEITNKIGRIPKLGGEEKTQLVLNVDKQLEEVRELMEQMDLEVR
ELPIQSRGMYQSRLKSYKGEMDKLEKDFKRSRIAYSDEVRNELLGEDAGSSESQLIKLRE
ERAHLLDNTEKLERSSRRLDAGYQIAVETEQVGQEILANLHTDREKIQRSRDRLRETDAN
LGKSSRILTGMLRRIIQNRVLVFVLGAIILITIILAIYFNVRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagattttgaagcctatgaacaggactttggaaccctgacagcagaaataacc
aacaaaattggaaggattcccaaattaggtggagaggagaagacacagctggttctaaat
gtcgacaaacagctcgaagaagtcagagagttgatggagcagatggatctggaggtgcgt
gagctccccatccagagcagaggcatgtaccagagcagactgaagagctacaagggggag
atggacaagctggagaaagactttaaaaggtcacgtatcgcctacagtgatgaggtgcgg
aacgagctcctgggggaagacgctggctcatctgagagtcagttgatcaagttacgtgaa
gagagagcacatctgttggacaacacagagaagctggaaaggtcatctcggaggctggac
gcaggctaccagatagcagtggaaaccgaacaagttggccaagagatcctggctaaccta
cacaccgaccgcgagaagatccagagatccagagatcggctgagagagacagacgccaac
ctgggcaagagctcccgcatcctaaccggcatgctgagaagaatcatccagaacagagtc
ctggtcttcgtcctcggcgccatcatcctcatcaccatcatcctggctatctatttcaat
gtgcgagggcactga
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