KEGG   Oncorhynchus gorbuscha (pink salmon): 124048285
Entry
124048285         CDS       T07892                                 
Symbol
chad
Name
(RefSeq) chondroadherin
  KO
K06248  chondroadherin
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510  Focal adhesion
ogo04512  ECM-receptor interaction
ogo04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124048285 (chad)
   04518 Integrin signaling
    124048285 (chad)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124048285 (chad)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ogo00535]
    124048285 (chad)
Proteoglycans [BR:ogo00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    124048285 (chad)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRR_14 LRR_9 LRRNT LRR_LRWD1 LRR_NXF1-5
Other DBs
NCBI-GeneID: 124048285
NCBI-ProteinID: XP_046224876
LinkDB
Position
LG11:21679824..21687826
AA seq 363 aa
MRCVSFLSVWPYLLVLGPVVWGAPSQCPALCHCHGDLQHVICDNVGIKNIPQVSEATRLL
NLQRNNLGSLPTGSFASSKGLISLHMQHCQLREIGGQAFKGLKKLIYLYLSNNEITSIKP
GAFEDLTELTYLYLDGNRISDLPKGIFSPMINLFILQLNDNKLRDIKPGTFAGAKDLRWL
HMSGNEMSSLQPGSLDEVENLAILHLDRNRLSTYPSLAMSKLRVVEELSLAKNPLRSIPD
NAFQSFGRYMEKLHLDGMGLEKFSDGAFNGMTAIKSLHLDNNKLKSLPKSLEFTSITNLT
LANNPWSCTCTLAPLRKWMDSSRQRPDALCAAPSSQRGKQIRDSSAFSDCTVKTKRAKKG
TRH
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcggtgtgtgagcttcctctcggtctggccatacctgctggtccttggcccggtggta
tggggcgctcccagccagtgcccggccctgtgtcactgccacggggacctgcagcacgtc
atctgtgacaacgtggggataaagaatattccacaggtgtccgaggccacccgtctgctc
aatctgcagaggaacaacctgggcagcctgcccaccggctccttcgccagcagcaagggt
ctcatctcgttgcacatgcagcactgccagctccgcgagatcggcggacaggccttcaag
gggctcaagaagctcatctacctctacctgtccaacaatgagatcaccagcatcaagccg
ggtgccttcgaggacctcaccgagctcacctacctctacctggacggcaaccgcatcagc
gacctacccaagggcatcttctcgcccatgatcaacctgttcatcctgcagctcaacgat
aacaagctgcgcgacatcaagccaggcaccttcgccggagccaaggacctgcgctggctg
cacatgagtggcaatgagatgagctcgctgcagccgggctctctggacgaagtagagaac
ctggccatcctgcaccttgacaggaacaggctgtccacttaccccagtctggccatgagc
aagctgagagtggtggaggaactgagcctggccaagaaccccctgagaagcatccctgac
aacgccttccagagcttcggacgctacatggagaagctgcacctggacggcatggggctg
gagaagttttctgacggggcgttcaacggcatgacggccatcaagtctctgcacttggac
aacaacaagctcaagtccctgcccaagagcctggagttcaccagcatcaccaacctcacg
ctcgccaacaacccctggagctgcacctgcacgctagcccctctgcgcaagtggatggat
tctagccgccagcgccctgatgcgctctgtgccgctccgtcctcacagagaggaaagcag
atcagggacagctctgccttcagcgactgcacagttaagacaaagagagccaagaagggc
acacgccattaa

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