Oncorhynchus gorbuscha (pink salmon): 124048306
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Entry
124048306 CDS
T07892
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
ogo04144
Endocytosis
ogo04145
Phagosome
ogo04148
Efferocytosis
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124048306 (rab5b)
04145 Phagosome
124048306 (rab5b)
04137 Mitophagy - animal
124048306 (rab5b)
04148 Efferocytosis
124048306 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124048306 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124048306 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124048306 (rab5b)
04031 GTP-binding proteins [BR:
ogo04031
]
124048306 (rab5b)
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
124048306 (rab5b)
Endosome - Lysosome transport
124048306 (rab5b)
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124048306 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
124048306 (rab5b)
Exosomal proteins of colorectal cancer cells
124048306 (rab5b)
Exosomal proteins of melanoma cells
124048306 (rab5b)
GTP-binding proteins [BR:
ogo04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
124048306 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
124048306
NCBI-ProteinID:
XP_046224909
LinkDB
All DBs
Position
LG01:105239403..105246794
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AA seq
218 aa
AA seq
DB search
MATRGSGRPNCMLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYCEDTGLLFMETSAKTAMNVNDLFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAHNTRSCCGGGGGN
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagagggagtggccggcccaactgcatgctgccccagacaaagatatgccag
tttaaactggtgttgctgggagacatggctgtgggcaagtccagcctggtgctgcgcttc
gtcaagggacagtttgatgagttccaggagaccaccattggagctgcattcctggcccag
tctgtgtgtctagacgacaccactgtgaagtttgagatctgggacacggcgggacaggag
cgctaccacagtctggctcccatgtactaccgcggggcacaggctgccatcgtggtcttt
gacatcaccaagccggagacgtttgagcgagccaaagcctgggtgaaggagctacagagg
caggctagccccaacattgtcatcgctttggcagggaacaaggcggacctggctgagaag
agactagtggagtacgaggaggcccagacttattgtgaagacactgggcttctcttcatg
gagacctctgccaagacggccatgaatgtcaacgatctgttcctggccattgccaaaaag
atgccaaaaacagacacccagaaccctacacacgcagcacgacacagaggagtgaaccta
caggaccctgatgcccacaacacccgatcctgctgtggaggaggaggagggaactag
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