KEGG   Oncorhynchus gorbuscha (pink salmon): 124048306
Entry
124048306         CDS       T07892                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137  Mitophagy - animal
ogo04144  Endocytosis
ogo04145  Phagosome
ogo04148  Efferocytosis
ogo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124048306 (rab5b)
   04145 Phagosome
    124048306 (rab5b)
   04137 Mitophagy - animal
    124048306 (rab5b)
   04148 Efferocytosis
    124048306 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124048306 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124048306 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124048306 (rab5b)
   04031 GTP-binding proteins [BR:ogo04031]
    124048306 (rab5b)
Membrane trafficking [BR:ogo04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    124048306 (rab5b)
 Endosome - Lysosome transport
    124048306 (rab5b)
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124048306 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   124048306 (rab5b)
  Exosomal proteins of colorectal cancer cells
   124048306 (rab5b)
  Exosomal proteins of melanoma cells
   124048306 (rab5b)
GTP-binding proteins [BR:ogo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    124048306 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16
Other DBs
NCBI-GeneID: 124048306
NCBI-ProteinID: XP_046224909
LinkDB
Position
LG01:105239403..105246794
AA seq 218 aa
MATRGSGRPNCMLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYCEDTGLLFMETSAKTAMNVNDLFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAHNTRSCCGGGGGN
NT seq 657 nt   +upstreamnt  +downstreamnt
atggctaccagagggagtggccggcccaactgcatgctgccccagacaaagatatgccag
tttaaactggtgttgctgggagacatggctgtgggcaagtccagcctggtgctgcgcttc
gtcaagggacagtttgatgagttccaggagaccaccattggagctgcattcctggcccag
tctgtgtgtctagacgacaccactgtgaagtttgagatctgggacacggcgggacaggag
cgctaccacagtctggctcccatgtactaccgcggggcacaggctgccatcgtggtcttt
gacatcaccaagccggagacgtttgagcgagccaaagcctgggtgaaggagctacagagg
caggctagccccaacattgtcatcgctttggcagggaacaaggcggacctggctgagaag
agactagtggagtacgaggaggcccagacttattgtgaagacactgggcttctcttcatg
gagacctctgccaagacggccatgaatgtcaacgatctgttcctggccattgccaaaaag
atgccaaaaacagacacccagaaccctacacacgcagcacgacacagaggagtgaaccta
caggaccctgatgcccacaacacccgatcctgctgtggaggaggaggagggaactag

DBGET integrated database retrieval system