Oncorhynchus gorbuscha (pink salmon): 124048353
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Entry
124048353 CDS
T07892
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124048353 (rhbdl1)
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
124048353 (rhbdl1)
Peptidases and inhibitors [BR:
ogo01002
]
Serine peptidases
Family S54: Rhomboid family
124048353 (rhbdl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
DUF5580
DUF5580_M
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
124048353
NCBI-ProteinID:
XP_046225013
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All DBs
Position
LG11:complement(23820781..23873060)
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AA seq
372 aa
AA seq
DB search
MDRSSLFQLIQEQLDPDNTGFIAVENFTSLVEHHELQLDPSKLDMLFALVQSNEDGQVCY
QELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILPCETDRRW
YFHQNSLCPPPVFMAIITIIQIVVFMCYGIMLNKWVLQTYQPDFMKSSLVYHPRHRLQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVVAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLAGAVVGISMGLLILRSYEESLQKQCSWWVILFSFITFLLFAIFWNIFA
YELLGVQLPPAP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctctctgtttcagctcatacaagagcagctggacccagacaacaccggt
ttcattgcagtggagaacttcaccagtctggtggagcaccatgagctgcagctggacccc
tccaaactggacatgctgtttgcactggtgcagagcaacgaggatggacaggtgtgctac
caggagctcatcgagctgatgagcagcaagcgttccagcagtttccgacgagccatcgcc
aatggccgccgcacactgcagcgggagatcctattggacgagacgggcctgggcgtgtac
aagcgctttgtgcgctacgtggcctatgagatcctgccctgcgagacagaccggcgctgg
tacttccaccagaacagcttgtgtccccctcctgtcttcatggccatcattaccatcatc
cagatcgttgtgttcatgtgctatggcatcatgctgaataagtgggtactgcagacatac
cagccagacttcatgaagagctccctggtgtaccaccccagacaccgcctccaggtgtgg
cgcttcttcagctacatgttcatgcacgttgggttggaacagctggggttcaacgctctt
ctccagctgatgatcggcgttcccttggagatggtccatggcatcctacgcatcagtctg
ctctacatggctggtgtagtggcaggttccctgactgtgtccatcacagacatgcgtgct
ccagtggtggggggctccgggggtgtctacgctctgtgctcggcgcatctggccaacgtt
gtcatgaactgggccggtatgcggtgtccatacaagctcctccgcatgattctggcactg
gtgtgcatgagttcggaggtgggccgtgccgtgtggctgcgcttctccccgcccttgccc
tcctcggggccccagcccagcttcatggcccacctggcgggggcggtggtgggcatcagc
atgggcctgctcatcctgcgcagctacgaggagagcctgcagaagcagtgctcctggtgg
gtcatcctcttctccttcatcaccttccttctcttcgccatcttctggaacatcttcgcc
tacgagctgctgggggtgcagcttccacccgctccctga
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