Oncorhynchus gorbuscha (pink salmon): 124048356
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Entry
124048356 CDS
T07892
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90
KO
K24759
WD repeat-containing protein 90
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124048356 (wdr90)
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124048356 (wdr90)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_1st
EIF3I
CFA20_dom
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_RFWD3
eIF2A
Beta-prop_SCAP
NBCH_WD40
Beta-prop_NWD2_C
Laa1_Sip1_HTR5
Motif
Other DBs
NCBI-GeneID:
124048356
NCBI-ProteinID:
XP_046225017
LinkDB
All DBs
Position
LG11:complement(23949515..24007595)
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AA seq
1866 aa
AA seq
DB search
MTSRVWQHPYVNIFKHMRVEEWKKTSREGDVTTYMDKTLMCSVFRIRGSIPASNYILLPK
TSTQSLGLTGRYLYLLFRPSPAKHFVVHMDIAAEEGQVIRVSFSNLFKEFKSTATWLQFP
FLCGAAKGSVYESTAKTARHGLVGPAPSTVRWTCLMMDLQYILSVYLNRRHSHLKTVKLC
ANMSVKNMFTSDLVLDPGVSFNEAKQAGLASSLGTGPMPREMSFPVPKGGSWHDLYDYIR
FPSDGAKMPFDSIQKGFPSSVSTCSPAERSPTREMSRSVNISKPVQDRVSLIQQITTPKL
QPRHRTTLETSSIAELGVVTSGLNGQDTSQDDWHCPGDNLGKGQGSRTSRSHRSAVRIPC
TDDGGVHVYAHTEDDINTHGDDSDVEEIVCTAVSRPVTLPIAKESQQRKLHPDPILRLNR
IIGFGGATMKCALWTKSGDTVVYPCHAIIVSMKISSGQQRFFIGHTDKVSALTFNGNSTV
LASAQTGIQSVVRVWNYLKANCLAMFKTHAHSLSSLSFSYSGGVLCGVGKDGHSKTMVVV
WNTLRVTKGGEVSVLAKAHTDVDIQTMKIAFFDDTRMVSCGRDNVRLWRVRSGALRSCPV
NLGEYHALDFTDVAFEEGHFADREPEDRTLFASSRSGHILEIDYGSVAIKNVRRLLPAQQ
PHAQRREKQTFGMGLGIAVNSISVSSAFCATGSEDGFLRLWPLDFSTVFLEAEHEGPVSL
VSVSDDGLSVMAATTSGNLGYLDVSSRGYSTLMRSHTDGVLGFSVDGIRRRITTASCDRT
VRVWDMDSMQQLYDFVSEDTPCSVAFHPSLQVFSCGSSSGLVRVFDIASAKLLAEHRQHR
GEVVGLAFSPDGEFMYSAGSLGSLALYNSSQEDHHVLRVLGNVVARGTERAPDALTVSSD
NRCLAFVGPSEYTVTIMAARSLDELLRVDVSILDVESTSLDSALKVCFSPASTGHLLVTT
SANKILWISANTGRLLREVSKVHKHQCSSLAVSEDGRFLLTAGHNAVKVWDYSMQLHVNS
QMFIGHSQPIRQVNFAPDQMAVVSVGDAIFFWDFLAHPQETGTDRRSPPKAASVSPPKPA
LKGHSESEVNGRLLSNGMPRRTAPLPTSPPPCLDISSIDQIGQALSHLSLCEEDIDEVLP
RTAPLPAPLAGPSPRPPSGSFLKVTEMAAGGDSTLKSSLKRAADNDSLKVEKPVRPDCYK
QFTPRFKTSTLDQSTATPELGEEGLSLKAVIGYNGNGRANMVWNPETGLFAYSCGCVVVV
ENLHTGSQRHWLGHTEEISCLAVTNDAQTVASAAGSSGGSRSLICIWNVQDGTCSNTISY
HQGAVQALSFSRDDFFFLTVGDFTNPEVALWSTRTYQLLSRVSVSGPLHDVAFSPSAASQ
LACVGSHGLYFCNIHTQGLDVELKVQRVCVPEEVGDVELTALCYNANSILFTGTNSGHVC
AWDCNTQRCFMTWEADQGEIGVLLCRGNRLLTGSNTRRLRLWGVAAVQGMRPGGEASNTE
DRGAPVLLEQEMMLDGTVVSAAFDDVMDMGIVGTTAGTLWYINWVDNTSIRLISGHKSKV
NDVVFSPDESHFATCGEDGSVRVWTAPNNELVVQFQVLNQSCGSACWSPSKGGACVVGGY
SDGTLRIFRLASSEMELKLHPHPVAVTAIQYSANGQVILSAGRDGLMAVSSPVTGLTVRL
ISDHKGAPITTIQCVKKQYKEFGLEGNEMWLAASADRRVSVWAADWMKDKCELLDWLTFP
APANPEESDSLPPSLAAFSPIDHGLVVYTGYGVERELSFYSLAKKRVIKKIALSHWAMCF
SLSSKGRLIAVGSKERVLKLIKSSSGRFQDFLHHSDSLQTCRFSPSGKLLFTVAYNEILL
WEVRGL
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagagtgtggcaacacccctatgtcaacatcttcaaacacatgagagttgag
gaatggaagaagacctcaagagagggagatgtgacaacctatatggacaaaacactgatg
tgttcagtgtttcggatccgagggtccattccagccagcaattacatccttctgcccaag
accagcactcagtccctggggctgacaggacgctacctctacctgctcttcagacccagt
cctgccaaacactttgtagtgcatatggatattgctgctgaggagggccaggtgatccgt
gtctccttctccaacctgtttaaggagttcaagtccacggccacctggctgcagttcccc
ttcctgtgtggagcggccaagggctcggtgtacgagagcactgcaaaaacagccagacac
ggactggtgggtcccgccccctctacggtgcgttggacctgtctgatgatggacctgcag
tacattctctctgtctacctcaaccgccgccacagccacctgaagacagtcaaactgtgt
gccaacatgtcagtgaaaaacatgttcaccagtgacctggtgctagaccctggagtgtcc
ttcaatgaggcaaagcaggccgggttggcgtcatctctgggcacaggccccatgcctagg
gagatgtccttccctgtgcccaagggaggcagctggcatgacctctatgactacatcagg
tttccatcagacggagccaagatgccctttgactccattcagaaaggctttcccagctct
gtatctacatgttccccagcagagaggagtcccacgagagagatgtctcgcagtgtgaac
atcagcaaaccagtgcaagacagagtgtcactcatccagcagatcaccacccccaaacta
caaccaaggcatcgcaccactctggagacgtccagtattgctgagctgggagtggtcaca
tctggcctgaacggccaagacacatcacaggacgactggcattgccctggcgacaacctg
ggaaaaggtcaggggtcgaggacctccaggtcgcaccgctcggctgtcaggataccgtgc
acggacgatgggggcgtgcacgtttacgcccacaccgaggatgacatcaacacccacgga
gacgacagtgacgtagaggagattgtttgtacagcagtctcaagacctgtcactcttccc
atagccaaggaatcccaacagaggaagctgcatcctgaccccatcctcaggctcaacaga
atcattggttttgggggagccactatgaaatgtgctctatggactaagtctggggatacg
gtggtgtatccctgtcacgccatcatcgtctccatgaagatctcctccggacagcagagg
ttcttcatcggccacactgataaggtgtctgctctcacgttcaatgggaacagcacagtg
ctggcctcggcccagaccggcattcagagtgtggtgcgggtttggaactacctcaaggcc
aactgcttggccatgttcaagacccacgctcactcactgtcctcgttgagcttctcctac
agcggtggggttctatgtggagtggggaaagacggccacagtaaaaccatggtggttgtg
tggaacaccctgcgtgtcactaaaggaggagaggtgtctgtcctggccaaagcacacacc
gatgtggacatacagaccatgaagattgccttttttgatgacacacggatggtgtcctgt
ggtcgggataacgttcggttgtggcgtgtgcggagcggggccctgcggtcttgtccggtc
aacctgggggagtaccacgccctggacttcaccgacgtggcctttgaggagggtcacttt
gctgaccgcgagcctgaggaccgcacgctatttgccagtagccgcagtggccacatcctg
gagatagactacgggagcgtggcgatcaagaacgtcaggagactgttgcctgcccagcag
ccccacgctcagcgccgtgagaaacagaccttcggcatgggtctgggcatcgctgtcaac
agcatcagcgtttcatcagcgttctgcgccacaggctctgaggacggcttcctgcggctc
tggcccctagacttctccaccgtgttcctggaggctgaacacgagggtcctgtgagcctt
gtgtccgtgtccgacgacggcctcagcgtcatggcggccaccaccagcggtaacctgggc
tacctggacgtgagcagccgaggctacagcaccctgatgaggtcacacacggacggcgtg
ctgggcttcagcgtggacggtatccgtcggcgcatcaccaccgcctcctgcgaccgcacc
gtgcgcgtctgggacatggactccatgcagcagctgtatgactttgtttctgaagacacg
ccctgctccgtggccttccaccccagcctgcaagtcttctcctgtggatccagctctggc
cttgtcagggtctttgacatcgccagcgccaaactactggcagagcacaggcagcacaga
ggggaggtggtgggcctggccttttctccagatggcgagttcatgtacagcgctggctcc
ctgggctctctggcgctctacaactcctctcaggaagaccaccatgtactccgagtactg
ggtaatgtggttgctcgaggcactgaacgtgctcctgacgccctcactgtaagcagtgac
aatcgctgtctggctttcgtcgggccgtctgagtacaccgtcaccatcatggccgcccgc
tccctggatgagctgctgcgtgtggacgtgagtatcctggatgtggagagcaccagtcta
gactcggccttgaaggtgtgcttctccccggcctccaccggacacctactggtcaccacc
tccgccaacaagatcctgtggattagcgcgaacaccggacgactgctcagagaggtgtct
aaggtacacaagcaccagtgttcctctctagctgtgagtgaggatggacgtttcttactg
acagcaggacacaatgctgtgaaggtgtgggattacagcatgcagctgcatgtcaactcg
cagatgttcataggccacagccagcctattcgccaggtgaacttcgccccagaccagatg
gctgtggtctcagtaggagacgccatcttcttctgggacttcctggcccaccctcaggag
actggaactgacagacgttcaccaccaaaggcagcctctgtttcccctcctaaaccagcc
cttaaaggtcattcagagtcagaggtcaacggtaggctgctatccaatggaatgcctcga
cggacagcgccccttcccacctcacctccgccctgtttggacatcagctccatagaccag
attggacaagctctgagccacctgtctctgtgtgaggaggacattgatgaggttcttccc
cgcactgcccccctccctgcccccctggcaggcccctcccctcgccctccgtctggctcc
tttctcaaagtcactgagatggcagcaggcggagactcaaccctgaagtctagtctgaag
agagcagcggacaatgattctttgaaggtggagaagccagtgcgtcccgactgctacaag
caattcaccccacgtttcaaaacctccaccctcgaccagagtactgcaactcctgaactg
ggcgaagagggcctgagtctgaaggcagtaattggttacaatggcaatgggcgggccaac
atggtgtggaatccagaaacaggtctgtttgcctactcctgtggttgtgtggtggtggtg
gagaacctacacactggctcccagagacactggctgggccacactgaggaaatctcctgt
ctggctgttaccaatgacgcgcagactgtggcctcggcggcagggagcagcggtggctcc
aggagcctcatctgcatctggaacgttcaggatggaacctgcagtaataccatctcctac
caccagggggcggtgcaggccctgtccttttccagggatgatttcttcttcctcactgtg
ggggacttcaccaacccggaggtggcgctgtggagcaccaggacctaccagctgctgtcc
agggtcagtgtgtccggcccgctccacgacgtggccttcagcccctctgcagccagccag
ctggcctgtgtgggcagccatggactctacttctgcaacatccacacacagggcctggac
gtggagctcaaggtgcagagagtgtgtgtgccagaggaggtgggtgacgtggagctgacg
gcgctgtgctacaacgccaactccatcctcttcacgggcaccaacagtggacatgtgtgt
gcctgggactgcaacacccagcgttgcttcatgacctgggaggctgaccaaggggagatc
ggagtgctgctgtgtcgggggaaccgtctgttgacgggcagtaacactcgtaggctgagg
ctgtggggcgtggcagctgtacagggcatgaggcctggaggagaggcctctaacacagag
gacagaggtgctccggtgctattggagcaggagatgatgctggacgggacggtggtgagc
gcggcctttgacgacgtcatggacatgggcatcgtgggcaccacggcgggtaccctgtgg
tacatcaactgggtggacaacaccagcatccgcctcatcagcgggcacaagagcaaggta
aatgacgtggttttcagcccagacgagagccactttgccacgtgtggggaggatggcagt
gtgagggtgtggacggcccccaacaacgaactggtggtgcagtttcaggtgctcaaccag
agctgtggtagtgcgtgctggagtccctctaaagggggtgcctgtgtggtgggggggtac
agcgacgggaccctaaggatctttcgcctggcctcctcagagatggaactcaagctgcac
ccgcaccctgtggctgtcaccgccatccagtactctgctaacggtcaggtgatcctctct
gctgggagggacggcctgatggctgtcagcagcccagtaaccgggcttaccgtcagactc
atcagcgaccacaagggggcacccatcactaccatccagtgtgtgaagaaacagtacaaa
gaatttgggcttgaaggaaacgagatgtggttggctgccagtgcagacagacgggtcagc
gtttgggcagctgattggatgaaggacaagtgtgagcttctggactggctcacatttcca
gcccctgccaatcctgaggagtcagacagccttcctcccagcctggctgctttcagcccc
atagaccatggcctggtggtgtacacaggctatggagtggagagagagctgtccttctac
agcctggccaagaaacgggtcataaagaagattgccctgtcccattgggccatgtgcttc
agcctctcctccaagggtcgcctcatagcggtgggctcaaaagagcgagtgctgaagctc
atcaaatcatccagcggtaggttccaggacttcctccaccacagtgattctttgcagacc
tgtcgattctccccctcagggaaactcctctttaccgttgcctacaatgagatcctgctg
tgggaggtgcggggcctttag
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integrated database retrieval system