Oncorhynchus gorbuscha (pink salmon): 124048357
Help
Entry
124048357 CDS
T07892
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ogo04054
]
124048357 (nlrc3)
Pattern recognition receptors [BR:
ogo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124048357 (nlrc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
LRR_12
Motif
Other DBs
NCBI-GeneID:
124048357
NCBI-ProteinID:
XP_046225018
LinkDB
All DBs
Position
LG11:complement(24077921..24099915)
Genome browser
AA seq
1135 aa
AA seq
DB search
MERNTHYNSILDRNKRIAWQEDCYVDLQSTPTSTSTKGEMEDVGWIQKHQGHLQRFITTP
LLEGALSHMRKLELLSQDEEAQVQAGGQLQEQVGTLTSILASMDPQGSNALQAFLENSDS
QTYRLITMHDPMVQEHKEALLLQYPTPSDSLSPGPCSPEFSSSRILLLVDGLSDLQQKEH
DLMQVEATRGARRHHVRQLALAKLLEPLTRVSLPPRVSLTVGVAGIGKSTLVGHFVRLWS
RGEICTDVSFVLPFAFWELNTGEKLSAERLVKLAFPHMTDPSLVLSGTCRTLLIFDGLDE
FRCPLDFSETMPCTDPKKEVSVDDLVTNIIRGNLLPEAAVWVTSRPAVASLIPGGLVDRL
TEIPGFSPKEIRLFLSHNFPKGDTASQIWTHLESNKIFMVMSYMPCICWIVAVTFGYLLE
SGWQEGLPRTCTELYSHFCAMRAEAGEPRGREPIKMDQLNGNNRKLLGSLGRLAFYGLLK
HKYTFSEQDIRAYGVDLPSTQGGLGTGVLIREESPSCVAYRFTHLTVQEFLAATYYHICS
KRAIFDLFSESAMSWPKIGFQNHFRSALQRSQQAEDGHLDVFVRFLAGLLCPAAVRPLAG
LLAQGKDDGGQRVWAAGLLQDLLGSGGAVVSLRSVNVAYCLQELQHTEVLRSVEEDLRCG
GLGWKLTRTHCTALAYLLQVSPECSEETNLSACLDYSTVKSLLPQLLFCSHLRLENNNFK
DDVMELLGSLLSAKDCHLQKISLAENAISNKGAKALSRALLVNRTLITLDLRSNNIGSKG
AKFLAEALKMNQVLVSINFQNNLIEEEGARALAEVLLSNRKLVSLNVQKNCIGADGAKRI
AEALKTNRTLTELILSSNQLGDKGTAALAQALTVNHSLHSLHLQSNSISNKGMTALTKAL
RLNRGLICLNLRENSIGVEGAKDMARALQENSSLRHLDLTANLLHDEGVKAIAGAVKVNR
ALTTLRLQWNFIKCTATKSLAHALLTNSTMQLLDLQENAIGDEGVVALAGALKTNTSLCT
LCLQGVSAGRSGAISMAEALMVNKTLHTLDLRGNSIGMEGAKALANALKTNRTLKSLNLQ
ENSLGMDGAIFIATALKGNHQLTYINLQGNSIGESGAKVISDAIRTNSPDCVVEI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaacacccattacaattcaattctggacagaaacaagcgtatcgcatggcaa
gaggactgctatgttgacctccagtctacccccacctcaacttccaccaagggagagatg
gaagatgtgggctggattcagaaacatcaggggcatctgcagcgcttcattaccactccc
ctcctggagggggcgctgtcccacatgaggaagctggaactgctgagccaggatgaggag
gcccaggtacaagctggggggcagctgcaggagcaggtgggcacccttacctccatcctg
gccagcatggacccccagggctctaacgctctccaggccttccttgagaactctgactcc
cagacgtacaggctcatcacgatgcacgatcccatggttcaggagcacaaggaggctctt
ctgttgcagtatcccacaccaagtgacagcctctcccctggcccctgtagcccagaattc
tcctcctccagaatcttgctcctggtcgacggcctgtcggacctccagcagaaggagcat
gacctcatgcaggtggaggccacccgtggggcgcggagacaccacgtcagacagctggcc
ctggccaaactcctggagcccctcacacgggtcagcctgccccccagggtctcactcact
gtgggagtggccggcatcggcaagagcacccttgtgggacattttgtacgcctttggagc
agaggtgagatctgcacagacgtgagttttgtcttgccctttgccttctgggagctgaac
actggggagaagctgtcggccgaaagactggtgaagctggccttccctcacatgacggac
cccagcctggtgctgagtggtacatgtcggacattgctgatcttcgacggtctggacgag
ttccgttgtcctctggacttctcggagactatgccttgcacagaccccaagaaggaggtg
tcggtggacgacttggtcactaacatcatccggggcaacctgctccccgaagcagcggtg
tgggtgacctccaggccggcggtggcctcgttgattcctgggggactagtggacaggttg
accgagatccccggattcagcccgaaggaaattcggctgttcctgagccacaacttccct
aagggagatactgccagtcagatatggactcacttggagtccaacaagatcttcatggtg
atgtcttacatgccttgcatttgctggatagtggcggttacctttgggtacctgttggag
agtggctggcaggagggccttcccaggacctgcactgagctctactcccacttctgtgct
atgagagccgaagcaggtgagcccagaggcagagagcctatcaagatggaccagcttaac
gggaacaaccgcaagctgctgggaagtctgggccgactggccttctacggacttctgaag
cacaaatacaccttcagtgagcaggacattagggcctatggagtagaccttccatccacc
cagggtggcctcggaactggagtactgatccgcgaggaatccccgagttgtgtggcctac
cgcttcacccacctgactgtgcaggagttcttagcagccacgtactaccacatctgctcc
aaacgtgccatctttgacctgttcagcgagagcgccatgtcctggcccaagattggcttc
cagaaccacttcaggagcgccctgcagcgatcccagcaggcagaggatggtcacctggat
gtgtttgtgcgattcctggcggggttgctgtgtccagcggcagtgcggccgctggcaggc
ctgctggcccaggggaaggacgatgggggccaaagggtttgggcggctgggctgctgcag
gacctcctgggcagcggtggtgctgtggtgtcactacgctcagtgaacgtggcctactgc
ctgcaggagctgcagcacacagaggtgctacgcagcgtggaggaggacctgcgctgtggc
ggcctgggatggaagctgacacggacgcactgcacagcgctggcctacctgctacaggtg
tctccagagtgcagcgaggagaccaacctgtcggcatgtctggactactccactgtcaaa
agcctgctgcctcagctgctcttctgcagccatctcagattggaaaataacaattttaaa
gatgatgtcatggaactgctgggaagcttactgagtgcaaaggactgccaccttcagaag
ataagtctggcagagaacgctatcagcaacaaaggggccaaggccctgagtcgagcacta
ctggttaaccggacgctaattacacttgatctccgtagcaacaacattggatctaaaggc
gccaagtttctagcagaagccctcaaaatgaatcaggtcctggtgtccatcaatttccaa
aataatctaattgaggaggagggcgctcgggccctggctgaggtgctgctgtccaaccgc
aaacttgtctcgctgaatgtacagaagaattgtattggagcagatggagccaagaggatt
gcagaagcgctaaagacaaaccggacacttacagaactgattctgagcagtaaccagctg
ggggacaaaggcactgcagccctggcccaggccctgaccgtcaaccacagcctccactcg
ctgcacctgcagagtaactccatcagtaacaaagggatgactgcgttaaccaaggctctg
cggttgaaccgtggactcatctgtctgaacctgcgcgagaactcaatcggggtggagggg
gcgaaggatatggccagggcactgcaggagaacagctctctccggcacctggatcttaca
gccaacctgctgcacgatgagggggtgaaagccatagctggagctgtgaaggtcaaccga
gcgcttactactttacgtctccagtggaatttcatcaagtgcacagccactaaatccttg
gcccacgccctactcaccaactctaccatgcagctactagatctacaggaaaatgccatt
ggggatgaaggagtggtagctctggcaggagccctgaagaccaatacgtctctctgtaca
ttgtgtctccagggtgtatcagcaggcaggagtggagccatctcaatggccgaggctcta
atggtcaacaaaaccctgcacactctggacctacgagggaactccataggaatggaggga
gcaaaggctttggctaatgcactgaagacaaacagaacactcaaatcattaaatctgcag
gagaactctctgggaatggatggagccatattcatcgccacagccctgaaaggaaaccac
cagctaacttatataaacttgcaggggaacagcatcggagagtcgggagcaaaggtaatc
tccgatgccatcagaaccaactctccagactgtgtggtggagatctga
DBGET
integrated database retrieval system
