Oncorhynchus gorbuscha (pink salmon): 124048388
Help
Entry
124048388 CDS
T07892
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecule (CAM) interaction
ogo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124048388 (lrrc4bb)
04517 IgSF CAM signaling
124048388 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124048388 (lrrc4bb)
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
NGL family
124048388 (lrrc4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
DUF7617
Ig_6
Motif
Other DBs
NCBI-GeneID:
124048388
NCBI-ProteinID:
XP_046225075
LinkDB
All DBs
Position
LG11:25738511..25750847
Genome browser
AA seq
752 aa
AA seq
DB search
MRVVMVTSPSTPSPLLWLVQILLWLHHHGPQVTEAAPPCPNPCSCSNQASRVICTRKSLV
EVPDSISVNTRYLNLQENTIEVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLDYI
SEAAFEGLFNLRFLNLGMCGLKEIPNLTPLVRLEELELSGNQLGNVRPGSFQGLVSLRKL
WLMHSKVTVIERNAFDDLKNLEELNLSHNTLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSTSDSSNPFSYFTTVTVETVETNNGEDSAARQYINETYVPPDYLG
PTVSGGVLGKGRAGFTISPSRSSLSSLSPRATRATEKAVTVSIMEVTNIPGLDDVMKTTK
IIIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPTRAIEIINVEDEMGAGAGSGISGGS
TMQSGCGGDGTLRMHHPEIVNLPNIGRSEHLNHYYKANHFNNNVMGLSIGTGAGISTLSN
KNNPSPLNQQGQDIPISCTQVPISSATFQTMSGNGANTNPLSVSPPLPMSLPMSPMGLHG
SIKGFMGQNQNPQMEPLLFKGNSKENVQETQI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctccaccccttcccccctcctctggttggtccag
attttactgtggctccaccaccatggacctcaggtaacagaggccgctcccccatgtcca
aacccctgtagctgctccaatcaggcaagccgagtgatctgtacaaggaagagtttggta
gaagtcccggacagtatttctgtgaacacaagataccttaacctacaagagaacacgatt
gaggtgataaagtctgacacattcaagcacctgcggcatttggaaatcctgcagctttcc
aagaaccacatcagacaaatcgaggtgggcgcgttcaatggcctacccaacctcaacacc
ctggagctcttcgacaaccgacttacgttggtaccgtcgcaggcttttgagtacctcagc
aagctgcgggagctctggctacggaacaaccccatcgagacactgccggcgtacgctttc
caccgcgttccctccctgcgccgtctcgacctgggcgaactacggaagttggactacatc
tctgaggctgccttcgagggcctgttcaacttgcgtttcctgaacctgggcatgtgcggt
ctgaaggaaatacccaacctcacacccttggtccgactggaggagctagagctgtctggc
aaccagctggggaatgtccggcccggctcgttccaaggcctggtgtcgctgcgcaaactg
tggctcatgcactccaaggtgactgtcattgagcgcaatgccttcgacgacctgaagaac
ctggaggaactcaacctgtcccacaacaccttgcactcgctgccccacgatctcttcacc
ccgctgcaccagttggagcgggtgcacctcaaccacaacccctgggtgtgcaactgtgat
gtcctgtggctcagctggtggctgaaggagacggtgcccagtaacaccacatgctgtgcc
cgctgccacgcgcccccaggcctgaagggccggtacattggtgagctggaccagagccac
ttcacatgctacgctcctgtcattgtagagccacccactgacctcaatgtcacagagggc
atggctgccgagctgaaatgtcgcactggcacctccatgacgtctgtcaactggctcacc
ccaaatggcaccctcatgacgcatgggtcgtaccgtgtcaggatctcagtccttcacgac
ggaaccctgaatttcaccaatgtgactgtgcaggacacgggccaatacacctgcatggtg
accaactccgctggcaacactacggcaaccgcagtgctcaacgtgtctacctcagactcc
agcaaccctttcagctacttcaccaccgtcactgtggaaaccgtggaaactaacaatggg
gaggattccgctgcaaggcagtacatcaacgaaacctacgtaccgccagattacctgggt
cccactgtttcaggaggggtactgggtaaaggcagggctggattcaccatatctccatct
cgctcatctctctcctctctgtccccgcgagccaccagagccactgaaaaggcagtcaca
gtgtcgataatggaggtcacgaacatccctggcctggacgacgtgatgaagaccaccaag
atcatcattggctgcttcgtggccatcaccttcatggcggccgtgatgctggtggtcttc
tacaagctgaggaagcagcaccagctgcacaagcaccatggccccacccgcgccatcgag
atcatcaacgtggaggatgagatgggtgccggggccgggagcggcatctcagggggatcg
accatgcaatccgggtgcggaggagacggaaccttgagaatgcatcacccagaaatagtc
aaccttcccaacatcgggcgatcagagcatcttaaccattactacaaggccaatcatttc
aacaacaacgttatgggtctgagcattgggacaggggcaggcatcagtactctaagcaac
aagaacaacccgtccccactgaaccagcaaggccaggatatccccatctcctgtacacag
gttccaatctcctcagccactttccagaccatgtccggaaatggcgccaacaccaaccct
ctttccgtttccccacctctgccgatgtccctccccatgtcccccatgggattacacgga
tcgatcaagggtttcatgggccagaaccagaatccacaaatggagcctcttttgttcaag
ggaaactcaaaggaaaacgttcaagagactcaaatctga
DBGET
integrated database retrieval system
