KEGG   Oncorhynchus gorbuscha (pink salmon): 124048420
Entry
124048420         CDS       T07892                                 
Name
(RefSeq) integrin beta-3-like isoform X1
  KO
K06493  integrin beta 3
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03266  Virion - Herpesvirus
ogo04081  Hormone signaling
ogo04145  Phagosome
ogo04148  Efferocytosis
ogo04510  Focal adhesion
ogo04512  ECM-receptor interaction
ogo04810  Regulation of actin cytoskeleton
ogo04820  Cytoskeleton in muscle cells
ogo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    124048420
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    124048420
   04512 ECM-receptor interaction
    124048420
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124048420
   04148 Efferocytosis
    124048420
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124048420
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124048420
   04810 Regulation of actin cytoskeleton
    124048420
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124048420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124048420
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124048420
   04515 Cell adhesion molecules [BR:ogo04515]
    124048420
   04090 CD molecules [BR:ogo04090]
    124048420
Membrane trafficking [BR:ogo04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    124048420
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124048420
Cell adhesion molecules [BR:ogo04515]
 Integrins
  Integrin beta subunits
   124048420
CD molecules [BR:ogo04090]
 Proteins
  124048420
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin I-EGF_1 EGF_2 EGF_integrin EGF_TEN EGF_Teneurin BNR_6
Other DBs
NCBI-GeneID: 124048420
NCBI-ProteinID: XP_046225153
LinkDB
Position
LG11:complement(26944669..26985198)
AA seq 805 aa
MGRPTHITQRIQLWIGYFVLFAVTDVLGSNICTSRGASTCKQCLAVHPTCAWCSQEDFGQ
GVAGSSRCDLKRNLLVAGCAPPTALEFPTSKLQVKEDRPLSNKAAGDTADATQIQPQRLH
ITLRPDDSKRFTVKVRQVEDYPVDLYYLMDLSFSMNDDLFRLRTLGKGLAKEMGRTTSNL
RMGFGAFVDKPLSPYMYISPKEALLNPCHGINTTCLPQFGYKHVLSLTEEVGRFTEEVKK
QIVSRNRDAPEGGFDAIIQAAVCNEKIGWRQGASHLLIFTTDAKTHVALDGRLAGIVQPN
DGKCHLNSENMYSMSTIMDYPSLALITEKMSENNINLIFAVTSPVVPLYQNYSELIPGTT
VGTLSNDSGNVIQLILNAYAKIRSVIDMETQGVPEELSLSFNATCLNGEVIPGIKSCSGL
KIGDTVSFSVEARARGCPKDKRKTFVIKPVGFKDSLTVTVTFECECKCQARAEPLSPVCN
NGNGTYECGICLCHPGRLGPRCECAEGDYSTTEQDRCSVPSTVGIGGAGGPGAAVCTGRG
DCVCGQCVCHSSDFGKVWGKLCECDDFNCLRYKGELCSGHGTCDCGFCQCDSDWQGENCN
CSRRTDTCMSSLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKH
FKRGKLFDDNTCTRICRDEIQLVDDLEFHDKNAVNCTYKDEDDCVERFQYYEDASGKSIL
FVVKEPDCPKGPDILVVLLSVAGAILVLGLAGLLIWKLLVTIHDRREFAKFEEERARAKW
DTVHNPLYKGATSTFTNITYRGNKE
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgggtaggcctactcacataacgcaaaggattcaactttggataggttatttcgtttta
tttgcagttactgatgttttgggttccaacatctgtacatcccgaggggccagcacatgt
aagcagtgtctggctgtacatcctacctgtgcgtggtgttcccaagaggactttgggcag
ggtgtggcaggctcgtctcgttgtgacctgaagcgtaacctattggtggcgggctgtgct
cctccgaccgcccttgagttccccaccagcaagctgcaggtgaaggaggaccggcccctc
agcaacaaggcagccggagacacggccgacgccacgcagatccaacctcagagactccac
atcaccctcagaccagatgactccaagcggttcacagtgaaggtgcgccaggtggaggac
tacccggtggacctgtattacctcatggacctgtccttctccatgaacgatgacctgttc
cgcctccgcaccctggggaaaggcctggccaaggaaatgggacgcaccaccagcaacctg
cgcatgggcttcggagccttcgtggacaagccactgtcaccttacatgtacatctccccc
aaggaggccctgctcaacccctgtcacgggatcaacaccacctgcctgccccagtttggc
tacaagcatgtgctgtctctgactgaggaggtgggccgcttcactgaggaggtgaagaaa
caaattgtgtccaggaacagagatgcccccgagggaggcttcgacgccattatacaggct
gccgtgtgtaatgagaagatcggttggcgtcagggtgcctctcacctcctgatcttcacc
accgatgccaagacccacgtggcgcttgatgggcgcctggcgggtatcgtgcagcccaat
gacgggaagtgccacctcaactcagagaacatgtacagcatgtctactatcatggactac
ccgtcactggctctgatcacagagaagatgtcagagaacaacatcaacctcatctttgcc
gtcaccagtcctgtggtgcccctctaccagaactacagtgagctaattcctgggaccact
gtgggcaccctgtccaatgactcaggcaatgtcatccagctcatattaaatgcctatgcg
aaaatccgctcagtgattgacatggagacacagggggttcctgaggagctgtctctctcc
ttcaacgccacctgtctcaatggagaggtcatccctggcataaaatcctgctctggactc
aaaataggagacacggtctccttcagcgtggaggcgcgggcgcgcggctgccccaaggac
aagcgcaagacgttcgtcatcaagcctgtgggcttcaaggactctctgaccgttactgtc
accttcgagtgcgagtgcaagtgccaggcccgcgccgagccacttagccctgtctgtaac
aatggcaacggcacctacgagtgtggcatctgcctgtgtcacccggggcgactggggccg
cggtgcgagtgtgccgagggtgactacagcaccacggaacaggaccggtgtagtgtcccc
tccaccgtgggcattgggggtgcagggggtcctggggcagcggtgtgcactgggaggggc
gactgtgtgtgcgggcaatgcgtgtgccacagcagcgactttggcaaggtgtggggcaag
ttgtgcgagtgcgatgacttcaactgcctgcgctacaagggcgagctgtgctcaggccac
ggcacctgtgactgtgggttctgccagtgtgactcggactggcagggggagaactgtaac
tgctcccgccgtactgacacctgtatgtccagccttggcctgctgtgtagtggccggggc
cagtgtgtgtgcggggcctgcgagtgcacccagccgggggcctatggggccacctgcgac
aagtgccccacctgccccgatgcctgcaccatgaagaaagagtgtgtggaatgtaagcat
ttcaagcgagggaagctgtttgatgacaacacctgcacccgcatctgcagagacgagatt
cagctggtggacgaccttgagttccatgataaaaatgctgtgaactgcacctataaggat
gaggatgactgtgtggagcgcttccagtattatgaggacgccagtggcaagtccatccta
tttgtggtcaaagagcccgactgccctaagggtccagacatcctggtggtgctgctgtcc
gtagccggggccatcttggttctgggtctggccggcctgctcatctggaagctgctggtc
accattcatgaccgccgcgagttcgccaagtttgaggaggagcgtgctcgcgccaagtgg
gatacggtccataaccccctgtacaaaggagccacctcaaccttcacaaacatcacatac
agaggcaacaaggagtga

DBGET integrated database retrieval system