Oncorhynchus gorbuscha (pink salmon): 124048420
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Entry
124048420 CDS
T07892
Name
(RefSeq) integrin beta-3-like isoform X1
KO
K06493
integrin beta 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03266
Virion - Herpesvirus
ogo04081
Hormone signaling
ogo04145
Phagosome
ogo04148
Efferocytosis
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04810
Regulation of actin cytoskeleton
ogo04820
Cytoskeleton in muscle cells
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
124048420
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
124048420
04512 ECM-receptor interaction
124048420
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124048420
04148 Efferocytosis
124048420
09144 Cellular community - eukaryotes
04510 Focal adhesion
124048420
09142 Cell motility
04820 Cytoskeleton in muscle cells
124048420
04810 Regulation of actin cytoskeleton
124048420
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124048420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124048420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124048420
04515 Cell adhesion molecules [BR:
ogo04515
]
124048420
04090 CD molecules [BR:
ogo04090
]
124048420
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
124048420
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124048420
Cell adhesion molecules [BR:
ogo04515
]
Integrins
Integrin beta subunits
124048420
CD molecules [BR:
ogo04090
]
Proteins
124048420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
EGF_integrin
EGF_TEN
EGF_Teneurin
BNR_6
Motif
Other DBs
NCBI-GeneID:
124048420
NCBI-ProteinID:
XP_046225153
LinkDB
All DBs
Position
LG11:complement(26944669..26985198)
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AA seq
805 aa
AA seq
DB search
MGRPTHITQRIQLWIGYFVLFAVTDVLGSNICTSRGASTCKQCLAVHPTCAWCSQEDFGQ
GVAGSSRCDLKRNLLVAGCAPPTALEFPTSKLQVKEDRPLSNKAAGDTADATQIQPQRLH
ITLRPDDSKRFTVKVRQVEDYPVDLYYLMDLSFSMNDDLFRLRTLGKGLAKEMGRTTSNL
RMGFGAFVDKPLSPYMYISPKEALLNPCHGINTTCLPQFGYKHVLSLTEEVGRFTEEVKK
QIVSRNRDAPEGGFDAIIQAAVCNEKIGWRQGASHLLIFTTDAKTHVALDGRLAGIVQPN
DGKCHLNSENMYSMSTIMDYPSLALITEKMSENNINLIFAVTSPVVPLYQNYSELIPGTT
VGTLSNDSGNVIQLILNAYAKIRSVIDMETQGVPEELSLSFNATCLNGEVIPGIKSCSGL
KIGDTVSFSVEARARGCPKDKRKTFVIKPVGFKDSLTVTVTFECECKCQARAEPLSPVCN
NGNGTYECGICLCHPGRLGPRCECAEGDYSTTEQDRCSVPSTVGIGGAGGPGAAVCTGRG
DCVCGQCVCHSSDFGKVWGKLCECDDFNCLRYKGELCSGHGTCDCGFCQCDSDWQGENCN
CSRRTDTCMSSLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKH
FKRGKLFDDNTCTRICRDEIQLVDDLEFHDKNAVNCTYKDEDDCVERFQYYEDASGKSIL
FVVKEPDCPKGPDILVVLLSVAGAILVLGLAGLLIWKLLVTIHDRREFAKFEEERARAKW
DTVHNPLYKGATSTFTNITYRGNKE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggcctactcacataacgcaaaggattcaactttggataggttatttcgtttta
tttgcagttactgatgttttgggttccaacatctgtacatcccgaggggccagcacatgt
aagcagtgtctggctgtacatcctacctgtgcgtggtgttcccaagaggactttgggcag
ggtgtggcaggctcgtctcgttgtgacctgaagcgtaacctattggtggcgggctgtgct
cctccgaccgcccttgagttccccaccagcaagctgcaggtgaaggaggaccggcccctc
agcaacaaggcagccggagacacggccgacgccacgcagatccaacctcagagactccac
atcaccctcagaccagatgactccaagcggttcacagtgaaggtgcgccaggtggaggac
tacccggtggacctgtattacctcatggacctgtccttctccatgaacgatgacctgttc
cgcctccgcaccctggggaaaggcctggccaaggaaatgggacgcaccaccagcaacctg
cgcatgggcttcggagccttcgtggacaagccactgtcaccttacatgtacatctccccc
aaggaggccctgctcaacccctgtcacgggatcaacaccacctgcctgccccagtttggc
tacaagcatgtgctgtctctgactgaggaggtgggccgcttcactgaggaggtgaagaaa
caaattgtgtccaggaacagagatgcccccgagggaggcttcgacgccattatacaggct
gccgtgtgtaatgagaagatcggttggcgtcagggtgcctctcacctcctgatcttcacc
accgatgccaagacccacgtggcgcttgatgggcgcctggcgggtatcgtgcagcccaat
gacgggaagtgccacctcaactcagagaacatgtacagcatgtctactatcatggactac
ccgtcactggctctgatcacagagaagatgtcagagaacaacatcaacctcatctttgcc
gtcaccagtcctgtggtgcccctctaccagaactacagtgagctaattcctgggaccact
gtgggcaccctgtccaatgactcaggcaatgtcatccagctcatattaaatgcctatgcg
aaaatccgctcagtgattgacatggagacacagggggttcctgaggagctgtctctctcc
ttcaacgccacctgtctcaatggagaggtcatccctggcataaaatcctgctctggactc
aaaataggagacacggtctccttcagcgtggaggcgcgggcgcgcggctgccccaaggac
aagcgcaagacgttcgtcatcaagcctgtgggcttcaaggactctctgaccgttactgtc
accttcgagtgcgagtgcaagtgccaggcccgcgccgagccacttagccctgtctgtaac
aatggcaacggcacctacgagtgtggcatctgcctgtgtcacccggggcgactggggccg
cggtgcgagtgtgccgagggtgactacagcaccacggaacaggaccggtgtagtgtcccc
tccaccgtgggcattgggggtgcagggggtcctggggcagcggtgtgcactgggaggggc
gactgtgtgtgcgggcaatgcgtgtgccacagcagcgactttggcaaggtgtggggcaag
ttgtgcgagtgcgatgacttcaactgcctgcgctacaagggcgagctgtgctcaggccac
ggcacctgtgactgtgggttctgccagtgtgactcggactggcagggggagaactgtaac
tgctcccgccgtactgacacctgtatgtccagccttggcctgctgtgtagtggccggggc
cagtgtgtgtgcggggcctgcgagtgcacccagccgggggcctatggggccacctgcgac
aagtgccccacctgccccgatgcctgcaccatgaagaaagagtgtgtggaatgtaagcat
ttcaagcgagggaagctgtttgatgacaacacctgcacccgcatctgcagagacgagatt
cagctggtggacgaccttgagttccatgataaaaatgctgtgaactgcacctataaggat
gaggatgactgtgtggagcgcttccagtattatgaggacgccagtggcaagtccatccta
tttgtggtcaaagagcccgactgccctaagggtccagacatcctggtggtgctgctgtcc
gtagccggggccatcttggttctgggtctggccggcctgctcatctggaagctgctggtc
accattcatgaccgccgcgagttcgccaagtttgaggaggagcgtgctcgcgccaagtgg
gatacggtccataaccccctgtacaaaggagccacctcaaccttcacaaacatcacatac
agaggcaacaaggagtga
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integrated database retrieval system