KEGG   Oncorhynchus gorbuscha (pink salmon): 124048430
Entry
124048430         CDS       T07892                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137  Mitophagy - animal
ogo04144  Endocytosis
ogo04145  Phagosome
ogo04148  Efferocytosis
ogo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124048430
   04145 Phagosome
    124048430
   04137 Mitophagy - animal
    124048430
   04148 Efferocytosis
    124048430
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124048430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124048430
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124048430
   04031 GTP-binding proteins [BR:ogo04031]
    124048430
Membrane trafficking [BR:ogo04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    124048430
 Endosome - Lysosome transport
    124048430
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124048430
  Exosomal proteins of other body fluids (saliva and urine)
   124048430
  Exosomal proteins of colorectal cancer cells
   124048430
  Exosomal proteins of bladder cancer cells
   124048430
GTP-binding proteins [BR:ogo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    124048430
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 124048430
NCBI-ProteinID: XP_046225168
LinkDB
Position
LG11:27555673..27565578
AA seq 220 aa
MAGRGGPARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNWVKELQ
RQASPNIVIALAGNKADVANKRAVDLQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEAQGAAGAGGRARAGVDLQEPAPQGRSGQCCGGST
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcgggtcgtggaggaccggcgcgacccaacggcccggcggcaggcaacaagatctgc
cagttcaagctggtgctgctgggggaatcggcggtgggcaagtccagtctggtgctgcgc
ttcgtcaagggccagtttcaggagtaccaagagagcaccattggagctgccttcctcaca
cagactgtctgcctggacgacacgacagtcaagtttgagatttgggacacggcaggccag
gagcgataccacagcctggcgcccatgtactacagaggagcccaggcggcaattgtggtc
tacgacatcaccaaccgagacacttttacgcgggcaaagaactgggtgaaggagctgcag
agacaagccagccccaacatcgtcatcgctctggctgggaacaaggccgacgtcgctaac
aagagagccgttgatctccaggaagcacaggcctatgccgatgacaacagtctactgttc
atggagacttcagctaagactgctatgaatgtcaacgaaatcttcatggccatagcaaag
aagctgcccaagaacgaggctcagggcgcagccggggcagggggccgggcccgggcagga
gtggaccttcaggagcccgccccccagggccgcagcggccaatgctgtggcgggagcact
tag

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