KEGG   Oncorhynchus gorbuscha (pink salmon): 124048458
Entry
124048458         CDS       T07892                                 
Name
(RefSeq) cyclin-T2-like isoform X1
  KO
K15188  cyclin T
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124048458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogo03021]
    124048458
Transcription machinery [BR:ogo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     124048458
    Brd4/P-TEFb complex
     124048458
    7SK RNP complex
     124048458
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 124048458
NCBI-ProteinID: XP_046225241
LinkDB
Position
LG01:107214291..107224068
AA seq 664 aa
MAACRGSSSKWFFTREQLEATPSRRTGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMYHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVSHACLNPQEAPLDT
KSNAYLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQHKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHDF
LQILEKTPSRLKRIRNWRATQAAKKPKGDGSQANDPYPGPSLVHEHSLGDSIPGVSNSAF
SKAASSFPVPLPGHASGPLSLDSIASMQGSSYTFTAPSDWPQDMGGRSEGGGYSLKTDTL
GLQQGASLSLQHGSLNPHRPDKTMEFNPIKHEHKAVAGGGKQQQQPPPAQKMSLDKYREK
HAAELAVQQKRKQTEQQAMEPEGRDAYIPSVQSDHRKHMQPHSNPGSSSSGTTSSPLKMK
LAVLGQDRLPSDKRDKGGSLKLRLPVPSQGVVASKEELKMKIKVSSERHSSSDEGGPKSK
HSSPLVSKEKHRDQSAHRHHKQHGHSQLHAAQHSGNGRGGLEGPEGVGPALLRSPLGLGS
VEGLAGPALASVSSSSRKRAHPNVAGHNHHSSKTSKSSKGGAGGLRTSQHPSETGQEASG
EPRP
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggcggcgtgccggggatcctcgtcgaaatggtttttcacccgggagcagcttgaagcc
acgccgtcccgccgtacgggagttgagccggatagagagctttcttaccgacagcaggcg
gcaaacctcattcaagatatgggccagagactcaacgtctcacaacttactataaataca
gcaattgtttacatgcatagattttatatgtaccactctttcaccaaattccacagaaat
atcatttctccaaccacattattcctagctgcaaaagttgaagagcaacctcggaaactg
gagcatgtcattaaggtttcacatgcttgtctaaaccctcaagaggccccgcttgatacg
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaaaccatagtgctg
cagactttaggatttgaaataactattgagcatccacacactgatgtggtgaaatgttcc
cagctagtgagagcaagcaaggatctggcacagacttcctatttcatggctaccaacagc
ctccacctcaccacgttctgcctgcagcacaagcccacagtcatcgcctgcgtctgcatc
cacctggcctgtaaatggtccaactgggagatccccgtctccactgacgggaaacactgg
tgggagtacgtggacaactctgtcacgctggagcttctcgatgaactgacacacgacttc
cttcagattctggagaagacgccgagcaggttgaagaggatacggaactggagggccaca
caagctgccaagaagcccaagggagatggctctcaggcgaacgacccctacccaggaccc
tccctggtccacgaacattccctaggagacagcatccctggggtctccaactcagccttc
tccaaagccgcctcctcgttccctgtcccactgccgggtcacgccagtggacccctctcc
ctggactccatcgcctccatgcagggcagctcctacaccttcaccgcccccagcgactgg
ccccaggacatggggggtcgctcggagggaggaggctattccctcaaaacagatacacta
ggcctccagcagggggcttcactgtctctgcagcacggctctctgaacccacacagacca
gataagaccatggagttcaaccctattaaacatgaacacaaggctgtagcgggggggggt
aaacagcaacagcagcccccgcctgcccagaaaatgtccctggacaagtacagagagaag
cacgctgccgagctggcggtgcagcagaaacgcaaacagacagagcagcaggctatggag
cctgagggcagggatgcctatataccctctgtccagtcagaccacaggaaacacatgcag
ccccactctaacccagggagcagcagcagcggcaccacttcatctcctcttaaaatgaag
ctggccgttttaggccaagacaggctcccctctgacaaacgggacaaggggggctcactc
aaactccgcctcccagttccttctcagggggtcgtggccagcaaagaggagctgaagatg
aaaatcaaggtgtcctctgagcgccacagctcttctgatgagggcgggcccaaaagcaaa
cattccagcccactggtgagcaaggagaagcatcgggaccagtctgcccaccgccaccac
aagcagcacggacactctcagctccacgcagcacagcacagcggcaatggccgggggggc
cttgaggggccagaaggtgtcgggccggccctcctccggagccccctggggctagggagc
gttgaggggttggcgggcccggcccttgcttctgtttccagttcctcccgcaagagggca
caccccaacgttgccggccacaaccaccactcctccaaaacgagcaaaagctccaagggc
ggcgcaggtgggctacggacatctcagcaccctagtgaaactggacaagaagccagtgga
gagccgcggccctga

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