Oncorhynchus gorbuscha (pink salmon): 124048470
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Entry
124048470 CDS
T07892
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124048470 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124048470 (smarcd2)
03036 Chromosome and associated proteins [BR:
ogo03036
]
124048470 (smarcd2)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124048470 (smarcd2)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124048470 (smarcd2)
PBAF complex
124048470 (smarcd2)
GBAF(ncBAF) complex
124048470 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
124048470
NCBI-ProteinID:
XP_046225261
LinkDB
All DBs
Position
LG11:complement(29676540..29698582)
Genome browser
AA seq
494 aa
AA seq
DB search
MASRGGFPATQMNLSVNPMNAGHVGGGMRMPGIQQNSGFRAMNATPQYHQHPGMPSNRGI
PMGPIGGPGPSYGGGNMPLRIGMGQSAMDASRKRFLQQQPQGGLGGPRRGKRRRMADKVL
PQRIRDLVPESEAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQKRKLRIYISNTYTPG
KPEGEEAEKVSSWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRM
PTTQETDGFQVKRPGDVSVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQALWL
YIKNNKLQDSHEKEYINCNRYFRQILGCTRMRFSEIPMKLAGLLQHPDPIIINHMISVDP
NDQKKTACYDIDVEVDDPLKAQMNSFLSSTTNQQEIAALEMKIHETIESINQLKTQRDFM
LSFSNNPQDFIQDWLKSQSRDLKLMTDVAGNPEEERRTEFYQAPWVPEAVGRYVYSKVQQ
RRQELEQVLGIRLT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagagggggctttccggctactcagatgaacctcagtgttaaccccatgaac
gctggacatgtaggcggtggaatgaggatgccaggaatccaacagaattcgggttttcga
gctatgaatgccactcctcagtaccatcagcaccctggtatgccttcaaacagggggatc
ccgatggggccaattgggggccctggaccctcttatgggggtgggaacatgcccttacgc
ataggaatggggcaatcagccatggatgcctctcgaaaacgattccttcaacaacaaccg
cagggggggctgggaggcccaaggcgtggcaaaaggcgcaggatggccgacaaggtgcta
ccacagaggatacgagacctggttccagagtctgaggcctatatggacctgctggccttt
gagaggaagctggaccagaccatcgcccgcaaacgcatggagatccaggaagccatcaaa
aagcccattacgcaaaagcgcaagttgaggatctacatatccaacacctacactcccggc
aagccagaaggcgaagaggcagaaaaagtgtcatcctgggaactaagggtggagggaaaa
ctccttgaggatcctgggaaacagaagaggaagttttcgtccttctttaagagtctggtc
attgagctcgataaggaactgtatggacctgataaccacttggtagagtggcacaggatg
cccaccacccaggagaccgacggcttccaggtgaagagaccaggggacgtgagcgtgaaa
tgcaccctgctcctaatgctggaccaccagcccccacagtacaagctggacccaagactg
gcccggttgctaggtgtacacacccagacacgggctagcatcatgcaggcactgtggctc
tacatcaagaacaacaagctgcaggacagccacgagaaggagtacatcaactgcaaccgc
tacttcagacagattttaggctgcacacgtatgcggttctctgagattcccatgaagctg
gctggcctgctgcagcatcctgaccccatcatcatcaatcacatgatcagcgtggacccg
aacgaccagaagaagactgcgtgctacgacattgacgtggaggtggacgatcctctgaag
gcccagatgaatagtttcctgtcctccactaccaatcaacaggagatcgccgccctggaa
atgaagatccacgagaccattgagtctattaaccagctgaagacccagcgagacttcatg
ttgagcttcagcaacaacccgcaggacttcatccaggactggctcaagtcccagagtcga
gacctcaagttgatgacggacgtggcaggtaacccagaggaggagaggaggactgagttt
taccaggccccctgggtgccagaagctgtgggccgatacgtctactctaaggtgcagcag
agaagacaggagttggagcaggtgctaggaattcgactcacctga
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