Oncorhynchus gorbuscha (pink salmon): 124048472
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Entry
124048472 CDS
T07892
Name
(RefSeq) nucleolar transcription factor 1-like
KO
K09273
upstream-binding transcription factor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124048472
03021 Transcription machinery [BR:
ogo03021
]
124048472
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
124048472
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
124048472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_box_5
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124048472
NCBI-ProteinID:
XP_046225263
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All DBs
Position
LG11:complement(29719555..29736825)
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AA seq
548 aa
AA seq
DB search
MDFTEEEEMETSDKEQAWGREDLMTLLHGIKENIPKGDMSIYTKGERTLEWDKVAFGPYS
PQMCHQKWKELSKKMRKVRSLAELVTEAEVAFENPFQCQNWKIHPDFPRRPTPSNGIFAK
ENFKKFKKQQPELTPPELFKLMNEKYNELPEHKKAKYTVKFQKEKEMYEKRMRKLRKEYS
GGKKVQRDCLKNIKGPLTPHGLWYRHERREFLLANPGAKRDCIRQSIVQKMRWSKLPDEE
KLKWINRSLEQQTQYEEEKMKEHPENNGSRKAKHKPLLRKSERLLKDLADGKPDKPPSKG
YNLFCREQKATIQGEGLPNTQYLVICSQRWKEMTKSKKEDYQRRCDKLKKEYEVNMNQFL
CTVTDKEHILLENRKSMRTSTLAAQKVTKNKFQGEPKKPPERGHTVFYSEKMAELRAKSS
HLSSRKCMAMVSPLWKKLAQKEKEHYQRIAQKRAREYQVELRSWFNTLSIKEQAKYLDQN
PNKLKILDNTEQRLMAKKGRTSDSEDDDIDTSSDEVDSDEDAEHMMEKENWSGCSSISSS
SEEDSDTE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggattttacagaggaagaagaaatggagacaagtgataaagaacaagcctggggtagg
gaggacctgatgacgctcctgcatggtatcaaagaaaacattcccaaaggtgacatgagt
atttacactaaaggggagaggacactggagtgggacaaggtggcttttggtccctactct
ccacagatgtgtcatcaaaagtggaaggaactatcaaaaaagatgcgcaaggttcgttct
ctagcagagctggtcactgaagctgaggttgcctttgaaaaccctttccagtgccagaac
tggaagatacaccctgacttcccaaggagacctaccccgtcaaacggcatcttcgccaaa
gagaactttaaaaagtttaagaagcagcagcctgaattgacacctcctgaactctttaag
ttaatgaatgagaagtataatgagctcccagagcacaagaaggcaaaatatactgtgaag
ttccagaaagagaaggaaatgtatgagaaacgcatgaggaagttgaggaaagagtactct
ggggggaagaaggtacagagagactgtttaaagaacataaaagggcccctcacaccccac
gggctctggtaccgccacgagaggagggaattccttctagccaacccaggtgccaaaagg
gactgtatcaggcagagtattgtgcagaagatgcgctggtccaagctacctgacgaggag
aaactcaagtggatcaatcgctctctggagcagcagacacagtatgaggaggagaagatg
aaggagcacccagagaataacgggagtcggaaggccaagcataagccacttctacgcaag
agtgagagactgttgaaggacttggcagacggcaaacctgacaaacccccatcgaagggt
tacaaccttttctgtagggaacagaaagccaccatacagggagagggactccctaacacc
cagtatttggtgatttgctcccagcgctggaaagaaatgacaaagagtaaaaaggaagac
taccagagacgctgtgacaagttaaagaaggaatacgaggtcaacatgaaccaatttttg
tgtactgtgacagataaggagcacattctattggagaacaggaaaagcatgcggacctca
acgttggctgcacaaaaagtgacgaaaaataagtttcaaggcgagcctaagaaaccacct
gagcggggtcacacagtattttacagcgagaagatggcggagctgagagccaagtcgagc
cacctcagctccaggaagtgcatggccatggtcagcccactgtggaagaagctggcccag
aaggaaaaggagcactaccagagaatagcccagaagagggctagggagtaccaagtagag
ctgcgcagctggtttaataccttgtccataaaggaacaagcaaagtacttggatcaaaac
ccaaataaattgaaaatcctcgacaacacagagcagagattgatggcaaagaagggcaga
acatcagactcggaggatgacgacatcgacacatccagtgatgaagttgactctgatgag
gatgccgaacatatgatggaaaaggagaattggtcagggtgctccagtattagctccagt
tctgaagaggactccgatacggaatga
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