Oncorhynchus gorbuscha (pink salmon): 124048485
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Entry
124048485 CDS
T07892
Name
(RefSeq) DDB1- and CUL4-associated factor 7 isoform X1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124048485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124048485
03036 Chromosome and associated proteins [BR:
ogo03036
]
124048485
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124048485
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
124048485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40
MIOS_WD40
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Reductase_C
Motif
Other DBs
NCBI-GeneID:
124048485
NCBI-ProteinID:
XP_046225282
LinkDB
All DBs
Position
LG11:complement(30399205..30420290)
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AA seq
343 aa
AA seq
DB search
MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQIVGLEEESSEFV
CRNTFDHPYPTTKIMWIPDTKGVYPDLLATSGDYLRIWRVSDTETRLECLLNNNKNSDFC
APLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDI
AFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATM
AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAVADDHQALIWDIQQM
PRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcacggtaagcgcaaagaaatttacaaatacgaggcgccatggacggtatat
gcaatgaattggagtgtgcgaccagacaagcgctttcgtctcgctcttggcagctttgtc
gaggagtacaataacaaggttcagatagttggattggaggaggagagctcagagtttgtc
tgccggaacacattcgaccacccttaccccaccacaaaaattatgtggattcccgacacc
aagggggtgtatcctgacctgctggctaccagtggagactacctgcgcatttggagggtg
agtgacactgagactcgtctggaatgcctgctcaacaacaacaaaaactctgacttctgt
gcaccgctgacatcctttgactggaatgaggtggaccctaacctgctgggtacctccagt
attgacacaacctgcactatctggggcctggagacaggtcaggtactgggcagggtcaac
ctggtgtctggccatgtcaagactcagctcatcgcccatgacaaagaggtctacgacatc
gctttcagccgagccggtggtggccgggacatgtttgcgtcggtgggggcagatggctct
gtgcgcatgtttgacttgcgccacctggagcacagcaccatcatctacgaggacccccag
caccacccgctgctccgcctctgctggaacaaacaagaccccaactacctggccaccatg
gcgatggatggaatggaggtggtgatcttggacgtccgtgtgccatgcaccccagtggcc
agactcaacaaccaccgtgcctgtgtcaacggcatcgcctgggcgccccactcctcctgc
cacatttgtacagcagtagcggatgaccatcaggcgctgatctgggacatccagcagatg
cccagagccatcgaggaccccatcctggcctacacggccgaaggcgagatcaataacgtc
cagtgggcatccacccagcctgactggatcgcaatctgctacaacaactgcctagagatt
ctccgcgtctga
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integrated database retrieval system
