KEGG   Oncorhynchus gorbuscha (pink salmon): 124048500
Entry
124048500         CDS       T07892                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2 isoform X1
  KO
K24823  protein PAT1 homolog 2
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124048500 (patl2)
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     124048500 (patl2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 124048500
NCBI-ProteinID: XP_046225309
LinkDB
Position
LG11:30700106..30716272
AA seq 703 aa
MSDSEQPETETAVSQPQWPENGGQWSDEEGGAGMDECGLAEMAEEDEEIDIYNNETFGMD
MDTEVGDTEGDPTNPLFQFGEKPPAPPALPSLSPSSPSFSPRARPQLRVQGPPGRRGRGQ
RGGQAMAQMFEDPAVVRTVEGRPSLQSLDSAIVDVGSVSYWDDLDPDAWMLSSYERTRHA
SGSVLQDPAIVCVMDSHAPGRGPNYLDSHYPFSNSSGRRGGLRGSYSNRPFGQRCPSQIN
TMLPSSPIVSRRPFTTQQPYNQVGGFLSRSPRPCPSTPQPLTPKMMQLRFGANSPRPSPF
YSPSSNRLQRFRFPGPVTQLHPQHRRLLSQRQQRSQRKPDSWDPYCNLMSAKEKEWIIRL
QMIQLQSENPHLDDYYYQEYYRRMEAKLAEEELGMRGKREPPKLTTPYVTKMDSYTPVVH
IEGSLGQVAVSTCFSPRRAINAVAAHCPHEELKDIRQQRLDVLKKIEKLFMVLLEVEEGQ
RMKAQVLGEGEEKGMMEKTEIKVEYIYSQLQHPDLEAGEEFLPCLLVSKGKQLLARLLPF
LSHDAALKVLSMVTSHLPVLMSRDADESLPVLYPSLRLVIGGMTFSQLIGVLKDFTASLP
DGSVCLSLVCQSKFGLSLLYALLSQGERLLSSDVPLEPSIGDFETWTDTVFLVASQLSQS
ALVEPLLLPSNLLTLFCRYLDKRTIHQLKSNMESATGYLAPPS
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgagtgactcagaacaaccagagactgaaaccgcagtctctcaacctcagtggccagag
aacggaggccaatggagcgatgaagaagggggggcaggcatggacgagtgtggattggca
gagatggcagaggaggatgaggaaatagatatctacaacaatgagacgtttggaatggat
atggatacagaagtcggggacacggaaggggatcccactaaccctctgttccaatttgga
gagaagccacctgccccacctgccttgccatccctctcccctagctccccctccttctct
cccagggcccggccacaactccgtgtccagggccctccgggccgacgaggaaggggacag
aggggaggtcaggccatggcgcagatgtttgaagacccggctgtggtgaggactgtggag
gggagaccaagtttgcagagcttagacagcgctatagtggacgttgggagcgtctcctac
tgggatgatctagatccagatgcttggatgttatcatcttatgagagaaccagacacgcc
tctggatcagtattgcaggacccggccattgtgtgtgtgatggacagtcatgcccctggc
agaggaccgaactacctggactctcactacccgttctccaactcaagtgggaggagaggg
ggcctaagagggtcatactcaaatagaccatttgggcaaagatgcccatctcagattaat
accatgttgcccagctctcccatcgtctcccggcgacctttcaccacacaacagccatat
aaccaggtggggggcttcctctcgcgctcgccacgtccctgcccctccacccctcaacct
ttaactccgaaaatgatgcagcttcgctttggtgcaaactccccaagaccctctcccttc
tacagcccctcgtcaaatcgtttgcagcgattcaggttccctggtccagtgacacagctt
cacccccaacacagacgactgttgagtcaaagacaacagagatcccaaagaaaaccagac
agctgggacccctactgtaacctcatgtcggccaaagagaaagagtggatcattagacta
cagatgattcagctccagagcgagaatccccacctggacgactactactaccaggagtac
tatcggcgaatggaggccaagctggcagaggaggagttgggcatgcggggcaagagggag
ccacccaaactcaccaccccctatgtcaccaagatggactcttacaccccagtggtgcac
atcgagggttccctaggccaggtcgccgtgtcgacgtgtttctctcctcgacgagcgatc
aatgcagttgcagcccactgtccacatgaggaactgaaagacatcaggcaacagcgattg
gatgtcctaaagaaaatagaaaagttgttcatggtgctgctggaggtagaagaggggcag
aggatgaaggcacaggtgctgggggagggtgaggagaaggggatgatggagaaaactgag
ataaaagtggagtacatctactcccagctacagcatcccgacctagaggcaggggaagaa
tttctgccatgtctcctggtgtccaaaggaaagcagctactggctcgactcctccccttc
ctttcccatgacgctgctttgaaagtcttaagcatggtgacatctcacctgcctgtactc
atgagcagagacgcagatgagtctcttccggttttgtacccgtctcttcgacttgtgatc
ggaggcatgaccttcagtcagcttattggggtccttaaagactttacggcatcacttccc
gatggcagcgtgtgcctctcacttgtctgccaaagcaagtttgggctctccttactctac
gctctgctgtcccaaggagagaggctactgtcctctgatgttcctctggagcccagcatt
ggtgactttgaaacctggacagacacagtcttcctggtggcatcgcagctatcccagagt
gctctggtggagccccttctcctaccctcgaaccttctcacactcttctgccgctacctg
gacaagcgtaccatccaccagctgaagagcaatatggaatctgcgactggatacctggct
cctccgtcgtag

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