Oncorhynchus gorbuscha (pink salmon): 124048641
Help
Entry
124048641 CDS
T07892
Symbol
sec31a
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec31A
KO
K14005
protein transport protein SEC31
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124048641 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124048641 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ogo02044
]
124048641 (sec31a)
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124048641 (sec31a)
Secretion system [BR:
ogo02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
124048641 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_HPS5
TPR_Sec16
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Prp18
SAP_new25
Motif
Other DBs
NCBI-GeneID:
124048641
NCBI-ProteinID:
XP_046225583
LinkDB
All DBs
Position
LG11:41136635..41161912
Genome browser
AA seq
1419 aa
AA seq
DB search
MKLKEINRTAIQSWSPAQHHPVYLAAGTSAQQLDASFSTSASLEIFELDLAEPSLDMKLR
GAYSSSHRYHKLAWGPHGMDAQGLPSGVLIAGGENGDVILYDPAKIIAGHGDVVIAQSNK
HSGPVRALDVNSFQDNLVASGGNESEIYIWDLNNFGSPMTPGPKTQPLEDISCVAWNRQV
QHILASASPSGRASIWDLRKNDLIIKVSDHSNRMHCSGLEWNPEVATQLVLASEDDRMPV
IQIWDLRFATSPLKVLENHTRGVLAIAWSLADPELLLSCGKDNRILCWNPNTAEVLYELP
TSTQWCFDIQWCPRNPAVLSAAAFDGHISIYSIMGGSSQAFSQTQADTISTSFGNMDPFG
MGQTLPPLQLSQAPPASTTITPLKKPPKWIRRPVGASFAFGGKLVSLENIKPNPQQPQQP
TAHVVHISQVITETTFLERSAQLQATLAAGSFVDFCQEKMDSAQNEFEKTVWSFLKVNFE
NDARGKYLELLGYKKEELAAKIAAALEGEPIQPEEPSTALAPTSVPEPEADPGPEPEVDL
QAVPGFDPTSTMPSLQSAVQLDLAPPVSTLQPLADPGLPPEDAFDLIAATNLQPASEVEL
TPAPEPETEDPFDLIAATNLQPAAEVELTPAPEPETEDPFDLIAAANLQPAAEVELTPAP
EPETEDPFDLIAAANLQPVAEVTGHLEPLAAEVDLTEALGAEPIAQEEMPVNEEIPLEEE
AAPPAEAEASLPREAPVPEGIKLRVSQGVDGLITQALLTGDFQGAVELCLHDNRMADSII
LAIAGGAELLEKTQRKYFTKTRGKITKLISAVVMRDWRDMLQTCELQNWKEALAAVMTYA
QPEEFSSLCDLLGCRLEAVEDFTLQAQACLCYICAGNVEKLVTCWTRAQDRHCPLSLQDL
VEKVVVLRKAVEQNQESDPSAVGLLLGEKMSQYASLLASQGSLTNAIAYLPQNTEQVAVQ
QLRDRLSRALGQQAPAAASVAQLPSPQPTAAQPRQLFTPTQPSMVSQQPAPAPVPATATA
PQQYYQPVRSASTVTSWSNQTPTALPSVPPPHLGPATTEPQVQPTPPMYGMPPSGSAAPP
ASSSAAYPPMYSHQYQPYPPASQYTLGTGGPAIYSPLQYSAPPPPSFSSSSPQAPAPGFM
PQYTQQPLYPPPSMGQPVSSAPPFSPPPPLSSGASFQHGGPGSPASYMPPLPPTGSSGPQ
NGWNDPPTLSRVPKKKKVPENYTPPSPIMAPIFSPLGAGDPQQPPLHASRPGPEPGPLPG
HAAADGPPHPXNPGMLKTRGGSVEGAPGAPTGDTIQPLQSIPAEKITMKPIPDEHLVLKN
TFEGLIHKCLAAATDPQTKRKLDDANKRLVALYDKLREQTLSPAIIGGLHNMVQCIESRS
YVESLNIHTHIVSSSNFSETSAFMPVLKVVLTQANKLGV
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaagagatcaaccgcacggccatccagagctggagcccagcacagcaccac
cctgtgtacctggcagcaggtacgtcagcccagcagctggatgcctccttcagtacctcc
gcctctctggagatctttgagctggacttggccgagccttctctggacatgaagctccgt
ggagcttactcctcctctcacagataccacaagctggcgtggggtccccacggcatggat
gcacagggtctcccgtctggcgtgctcatcgcagggggagagaacggtgacgtcatcctt
tacgacccggccaagatcattgctggacacggtgacgttgtcatcgctcagagtaacaaa
cacagcgggccagttagagccctagatgtcaactccttccaggacaacctggtggcttca
ggaggtaatgaatcagagatctacatctgggacctaaacaactttggctccccgatgaca
ccaggccctaaaactcagcctctagaggacatcagctgtgtggcgtggaacaggcaggtc
caacacatcctggcctcagccagccccagcggccgcgcctccatctgggacctccgcaag
aacgacctaatcatcaaagtcagcgaccacagcaacaggatgcactgctctgggctagaa
tggaaccccgaggtagctactcagctggtgctggcctcggaggatgacaggatgccagtg
atccagatctgggacctgcgttttgccacctcccctctcaaagtcctggagaaccacaca
cggggtgtcctggccatcgcctggagcctggcggaccctgagctgctactgagctgcggg
aaagacaaccgaatcctctgctggaaccccaacactgccgaggtgctgtatgagctgcct
accagcacccagtggtgctttgacatccagtggtgtcccaggaacccggcggtgctgtcg
gccgcagccttcgacggacacatcagcatctactccatcatggggggcagcagccaggct
ttcagccagacacaggcagacacgatcagcacgtcgtttggcaatatggatccatttggg
atgggtcagaccctgccccccctgcagctttcccaggccccgcccgcctccaccaccatc
acccccctcaaaaagccccccaagtggatccgcaggcccgtgggggcctccttcgctttt
ggtggtaagctggtgtcgttggagaacatcaagcccaacccccaacagcctcagcagccc
acggctcatgtggttcacattagtcaggtgattacggagacgaccttcctggagcgctct
gcccagctgcaggccacactggctgctggcagtttcgttgacttctgccaggagaagatg
gactcggcccagaacgagtttgagaagaccgtctggtccttcctgaaggtgaactttgag
aatgatgctcgtggaaaatacctggagcttttgggatataagaaagaggagctcgcagca
aagattgcagcagcattagagggagaacctattcagcccgaggagccctccactgctctt
gcccccacctctgtgcctgaacctgaggctgatcctggaccagaaccagaggtggactta
caggctgtacccggcttcgacccgacatcaacaatgcccagtctgcagtcggcagtccag
ctggacctggctcctcctgtctccaccctgcagcctctagcagaccctggactcccgcct
gaagacgcatttgacctcatcgctgctacaaacctccagccagcatcagaagtggaactc
acacctgctccggaaccagaaacggaagatccatttgacctcatcgctgctacaaacctc
cagccagcagcagaagtggaactcacacctgctccggaaccagaaacggaagatccattt
gacctcatcgccgctgcaaacctccagccagcagcagaagtggaactcacacctgctccg
gaaccagaaacggaagatccatttgacctcatcgccgctgcaaacctccagccagtagcg
gaagtgacaggacatctggaaccattggcagcagaagtagacctgacagaagcccttgga
gctgagcccatcgcccaggaagagatgccagtaaatgaagagattcctctggaggaggag
gcggctccaccagcagaggcagaggccagcctgccaagggaggctccagtcccagagggc
attaaactccgcgtcagtcaaggcgtggatggcctgatcacccaggccctgctgacgggg
gacttccagggcgcagtggaactctgtctccatgacaaccgcatggctgacagcatcatc
ctggccatcgccggaggggctgagcttctggagaaaacacagaggaagtacttcaccaag
actcgaggcaagatcaccaagctgatcagtgcggtggtgatgagggactggcgtgacatg
ctgcagacctgtgagctgcagaactggaaggaagctctggctgcagtcatgacctacgct
cagcccgaggagttctcctctctgtgtgacctgctgggctgcagactggaggctgtggag
gacttcacgctgcaggctcaggcttgtctgtgttacatctgcgctggcaacgtggagaaa
ctggtgacctgctggaccagagcacaggacagacactgccctctctctctgcaggatcta
gtcgagaaggtggtggtgctccgcaaggcggtagagcagaaccaggagtctgatccctct
gctgtggggcttctactgggggagaagatgagtcagtatgccagcctgctggcctcccag
ggcagcctcaccaacgccatcgcatacctgccccagaacacagagcaggttgcggtgcag
cagctgcgtgaccgtctcagcagagctctgggtcaacaggctcctgctgcagcctcagta
gcccaactcccatcccctcagcccacagctgcccagcccaggcagctcttcacccctacc
cagccttctatggtgtcccagcagcccgctccggcccctgtgcctgccactgccaccgca
ccgcagcagtattaccagccggtgaggtctgcctctacagttacctcctggagtaaccaa
actcccacagctctccccagtgtccctcctcctcatctaggccctgccaccacagagccc
caggttcagccgacaccccccatgtatgggatgcctccctctgggtcagctgctccccca
gcctcctcgtctgctgcatacccccccatgtactcacatcagtaccagccctaccctccg
gccagccagtacacccttggcactggtggcccagctatctattcacctctccagtactct
gctcctcctcctccctccttctcttcctcctcaccccaagccccagccccaggcttcatg
ccccaatacacccaacaacccctctacccacctccttccatgggccagcctgtgtcctcc
gctcctcctttctctcctcctcctccgctgtcatctggagcgtctttccaacatggcgga
ccgggttcgcctgcctcgtacatgccgccactcccaccaaccggatcctcaggcccacag
aatggctggaacgacccgcctaccctgagcagagtgccaaagaagaagaaggttccagag
aactacacgcctccttcccccatcatggcccccatcttttctcccctcggtgctggggac
ccccagcagccccccctacatgcctccaggccaggcccagaaccaggccccctaccaggg
catgcagcagcagatggccccccccacccantgaaccctggtatgctcaagacgcgtgga
ggaagtgtggagggagcgcccggagcccctactggagataccatacagccgctgcagtcc
atccctgctgagaaaataaccatgaagcccatccccgatgagcacctggtcctgaaaaac
acctttgagggcctcatccacaagtgcttggctgctgccaccgatcctcaaaccaagagg
aagctggatgacgccaacaaacgccttgtggccctctacgacaagctacgagagcagact
ctctccccagccatcatagggggcctgcacaacatggtgcagtgcatagagtctcgatcc
tacgtggagagcctcaacatccacacacacatagtgagcagcagcaacttcagtgagacg
tctgctttcatgcctgtgctcaaggtggtgttgacccaagccaacaaactgggggtctga
DBGET
integrated database retrieval system
