Oncorhynchus gorbuscha (pink salmon): 124048654
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Entry
124048654 CDS
T07892
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124048654
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124048654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
OspG_kinase
Motif
Other DBs
NCBI-GeneID:
124048654
NCBI-ProteinID:
XP_046225600
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All DBs
Position
LG11:complement(41637547..41668334)
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AA seq
1408 aa
AA seq
DB search
MMDPGQDLLLAALSESGICPNDLFDFDPQDAALPSPTPQSISISALGVGSGMEAMAPPTP
AVSIRHKPQPSTTTFVLNQLNQLPSLGTIVVTKPSTGGTARHTITVTKVVHSAPSALRGS
SSTLTYSTALPSPVSTVVPSNREQIQLKDLLRTGSTMKSSSLVELMRLKPPPDIAQPVAT
ATATGTKIILVSTKMIHKPVELNNGIKKEVSSKDVARIWVNDDMKVRSFSPTLKLPGMEE
EAEEEEDEELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSVKPPNVWYRMSIPEETVD
RGWLSALQLEAITYAAQQHETFLPNGDRASYLIGDGAGVGKGRTIAGIIYENYLLGRKRS
LWFSVSNDLKYDAERDLKDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVVFATYSSLIG
ESQSGGKYKTRFKQLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQNKL
PKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSNFIQAVERRGVGAMEIVAMDMK
LRGMYIARQLSFTGVTFKIEEVPLTTHYIKMYNKSVRLWVAAREKFQAAANLMEAEQRMK
KSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEEG
GGELNDFVSTAKGVLQSLIEKHFPAPDRQKLFSLLGIDLSVKKTPSPSEAAAEQKGKKRK
AGAEIKKPEKRKRKSGGLSGSSSDDSESEEFDKDDAESDDSFKSVSSGEDDDDFNPFKDD
SSEDEEDDPWLSGKRKEAKKGKEKMNKKKKKKKSIDPDSIHSALLASGLGSIRPAFTTPI
VKTSSTPAIAKVEADDSCMTSQDAVEDAQQMKRDLLDQLEKLAQDLPPNTLDELIDELGG
PDNVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAAS
SGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQ
RFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPLVNP
PSDFEGDFYKEIRHGLIGVGLINVEDRSGILSLDKDYNNIGKFLNRILGMAVQEQNALFQ
YFSDTLAAVIQNAKKNGRYDMGILDLGSGDEKVKKIEAKKFLTPGYSTSGHVELYTVSVE
RGMSWEDATHAWAEQSGPDDGFYVQIRNNKKTAILVQEVNSKKRLFLVYRPNTGKQLKLE
AYADIKKKCKKVLSDDAKQHWIDQYKSSAEICAHAYWRGNCKKASVGLQCEVGLRCRTYY
VLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLTNILSSS
DQSQQLAVQQQQKWQQLHPQSLSHVHNT
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcctggacaggatttgctcttggcagccctgagcgagagcggaatctgccct
aacgacctgttcgactttgaccctcaggatgctgctcttccctctcccaccccacagtcc
atctccatcagtgccctgggtgttggctcagggatggaggcaatggctccacccacacct
gcagtctcaatcaggcacaagcctcagccctcaactaccacatttgtcttaaatcaactg
aatcagttgccatcactgggaacaattgttgtgaccaagccctcaactggaggcacggcc
agacacaccatcacagtcactaaggtggtccattcagctccctcagccctgcggggatcc
tcttccacacttacctactccactgctctcccctccccagtctccacagtggttccttcc
aacagagagcagatccagctgaaggacctgttgaggaccggcagcaccatgaagagcagt
agtctggtggaactcatgaggctcaagccaccgccagacatcgcccagccggtcgccacg
gcaacagccacaggcaccaaaattatactggtctcgacaaagatgatccataaaccagtg
gaactgaacaacgggataaagaaggaggtgtcaagtaaagatgtcgctcggatctgggtg
aacgacgacatgaaagtgcggagcttctcacctacactaaaactcccaggaatggaggag
gaggctgaggaagaggaggatgaagagttgggtcatgctgagacatacgctgagtacatg
cctatgaaattgaggatcgggctgcgtcacccagacccagtggtggagaccagctccctg
tccagtgtgaagcctccaaacgtttggtacagaatgtccataccagaggagactgtcgac
cgcggctggctgtctgctctgcagctggaggccatcacatacgctgcccagcaacatgag
acattcctccctaatggcgaccgagcgtcctatctgataggagacggggccggagtaggc
aagggccggaccatcgctgggatcatctacgagaactacctcctcggtagaaagaggtca
ctctggttcagtgtttctaatgacctgaagtatgatgcggagagggatctgaaagacata
ggagccaagaacattcaggtccattcactaaacaagtttaagtatggtaagatctcttcc
aaacacaatggcagtgtgaagaagggggtggtcttcgctacgtactcctctctgattgga
gagagccagtctggagggaagtacaagacccgcttcaaacagctgctccactggtgtgga
gaggactttgacggagtcattgtatatgacgagtgtcacaaagccaaaaatgtctgtccc
atcgggtcatccaaacccaccaagactggactggcagtcctggagctgcagaacaaactg
cccaaggcacgggtggtgtacgctagtgccactggtgcgtctgagccccgtaacatggcc
tacatgaaccggctgggtatctggggagaggggacacctttcagagagttcagcaacttt
atccaggctgtggagcgcagaggtgttggtgccatggagatagttgccatggatatgaag
ctgagggggatgtacattgccaggcagctgagtttcacaggtgtcacgttcaagattgag
gaggttcccttgacaacccactacatcaagatgtacaacaagtctgtacgcctgtgggtg
gctgcgcgggagaagttccaggcggctgctaacctgatggaggcagagcagcggatgaag
aagtccatgtggggtcagttctggtcggcccaccagaggttcttcaagtacctctgcatt
gcctccaaggtccgcagggtggtgcagcttgccagggaggaggtcaaaaacggaaagtgt
gtcgtgattggtcttcagtcgacaggagaggccagaacactggaggccctggaggaagga
ggaggagagctgaacgactttgtttccaccgcaaaaggtgttctgcagtccttgatagag
aagcactttcctgctccagacagacaaaagctgttcagtctgctgggcatcgacctgtcg
gtcaagaagacgccatcgcccagcgaggccgccgcagagcaaaagggcaagaagaggaaa
gcaggtgctgagataaagaaaccagagaagcggaagagaaagtctggtggtctgtcaggg
agcagctctgacgacagcgaatcggaggagtttgataaggatgatgcggagagtgacgac
agcttcaagtcggtcagctcaggagaagatgatgatgacttcaaccccttcaaggatgat
tccagcgaggatgaggaggatgacccctggctgtctggaaagaggaaagaggcaaagaaa
ggcaaggagaagatgaataaaaagaagaaaaagaagaagagcattgacccagactctatc
cacagtgccttgttagcctctggtctgggctccatcaggcctgcttttaccacccccata
gtcaagacctccagcacacctgccatagccaaggtagaggcagatgacagctgtatgacc
agtcaggatgctgtggaagatgctcagcagatgaagagagatctgttggaccagctggag
aagctggctcaggatctaccccccaacactctggatgaactcatagacgagctgggagga
ccggacaatgtggcggagatgacgggccgtaaaggtcgggtggtcagtaacgacgacggc
agcatctcttacgagtcccgctctgaattggatgttcctgtggagatcctcaacctcaca
gagaaacagaggttcatggatggagagaaaaacatagccatcatctcggaggcggctagc
tccggtatctccctgcaggctgaccggcgggtgaagaaccagaggaggagggtccacatg
accctggagctgccctggagtgcagacagagccatacagcagtttgggaggacccacagg
tctaaccaggtgacagctccagagtacgtgttcctcatttctgaactggctggggaacag
aggtttgcctccattgtggccaagagactggagagcctgggtgccctcacgcatggagac
agaagagcaacggagacgagagatctcagcaggttcaactttgacaacaaatatggcaga
aatgcactggagatcgtgatgaagtctattgtcaacctggactctccgttagtgaatcct
ccttcggacttcgaaggggatttctacaaagagatccgtcatgggttgatcggagtgggt
ctgatcaatgtggaggaccgatcagggattctgtctctggacaaagactacaacaacata
gggaagttcctgaaccgtatcctagggatggcagtgcaggagcagaacgctctgttccag
tacttctctgacactctggcagctgtcatacagaacgccaagaagaacggacgctacgac
atgggcatcctggacctgggttctggggatgagaaggtgaagaagattgaagccaagaag
ttcctgaccccaggctactccacctcaggacatgtagagctctacacggtgagtgtggag
agaggcatgtcctgggaggatgctacccatgcctgggccgagcagagtggaccagatgat
ggcttctatgtacagataaggaacaacaagaagacggccatcttggtgcaggaggtgaac
agtaagaagaggctgttcctggtctatagacctaatacgggaaaacagcttaaactggaa
gcctatgctgacattaagaagaagtgtaaaaaggtgctctcagatgatgccaaacagcac
tggattgaccagtacaagtcttcagctgagatctgcgctcatgcatactggcgtggtaac
tgtaagaaggcgtcagtgggtctgcagtgtgaggtaggtctgcgctgcaggacgtactat
gtgctgtgtggctctgtgctcagcgtgtggaccaaggtggagggggtcctggcctccgtc
agcggaactaatgtcaagatgcaaatcgtccgcctcagaacagaggacgggcagaggatt
gtgggcctgatcattccagcgaactgcgtctctcctctgaccaacatcctgtcgtcatct
gaccagtctcagcaactggctgttcagcagcagcagaagtggcagcagctgcaccctcag
agcctcagccacgtacacaacacatag
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