Oncorhynchus gorbuscha (pink salmon): 124048664
Help
Entry
124048664 CDS
T07892
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124048664 (sec16a)
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124048664 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
124048664
NCBI-ProteinID:
XP_046225626
LinkDB
All DBs
Position
LG11:42107068..42175463
Genome browser
AA seq
2395 aa
AA seq
DB search
MQPPPRTGPPGASGPPPAGVGPNAFRRTRPHKHTGAAVMAGLPAQPMTDPFAFGRQAPPP
MATGHLPPPNSSPLPLPALPPGMYHQAGMGQGLHQSQPLDSAQAGAVPLGPPPPSTPGVS
ILTPHGTASPVPFPVQQPGPPGNAPPSAEQGYFNSREPAPSMTPGHLPMASAPMSGQAPY
GQDHGGDYHPQAMPFKPVPPVLSQWVPDHGSRPPSVQNYFQPTSDPLPQVCNAPPQSQIS
PHTPLPHNTPPTHPQQQHQPQPPPQHPDRPTSSQWSDLAGANTPQQHNAHFQAQTYFSQS
SATLDSWFNQHPQDLVYHQMGAGPGLARPDSARTHYRHDSAGSHHGSHYGSYHASSPGPA
LVPFIPDGTISMFFKGNDVENEETLAGEGARAVNGLQDFQPSYNHQQMSSPQPQANPVVG
AEATHSYRAPPPQAGQSLTYMNDGNFPGAGQPIQQEPAEAQFDHVENLECVPNQEVLPSE
PLSNPAVAAAHGGDCYEAGPNLETPDSVPRPIRSASVSSSYSNLSHGSGTGTVPRRHQGV
VGTFIQQESPRPSEDAFSSAAAGGYFEQIDTSPAGDMAAAYQSIPERMCHSQPPTPSPPK
PTGIFQASANSSFEPVRSHSVAVRPAEVDRARMVAERGSDSLPGNLEQPPDNLENIYGAA
TGHTQAGDGAGPPPLAYPLSHSHSRPSSRAHVAHRPCESPATTLWAQHDPASLGTNILLV
PAAPPVLAPLREPSAEVIQPPEDGSLDLQPPQRAPPPSQHPSENLENPPKVSEGDTSDSQ
PNLGYASLLVSESLHQPVLIAPPTSNYSVIPPSNPALAANQVSLREATVPVRPPLQAQGA
SAVQPGPPLRSNQNPLFALTPMSFSVASSQSPLNLVRDDGEGVKPETTPPPSQSQPARSP
LSKVQSTCRTNHSSLPVNLQAPLPAAPGAANYNQLSNYELLDFSMHQSQIPNQAAGLPPL
SLQQGPPLASNAPGFYLQVTKDAQQVSRGNGDASTAQMPADPMPPPVAPNTQQPPSEPPM
VPQPQPGHQGQGDDPAAPLSGAPPPQGQYPPPMQGPATGNAPTPSAAYPGPRGHVPLANP
HPPGTGVPSAQPAPTDPPRPPSSLGSQLGYGPPPPGQVYGGYYGGAYPEYPDGRGSYLPA
QYPPAPVDPRAQQYYQDDPYMIADPRYGRYEGANPAYPPYREPQPERPSSRTSQYSDRPS
SRQGFPPEEYQRANRSAYDDYYAEYYKNQYGDRSRWEGYNASAGTYDPRYRDYYDQNYWY
NYNPEAYRGREAAYYNQQPSQQYPAATTRPQGYDDKWRYYPGYDASFDDDYRRQRDQYKD
DFDRRSVHSEQSAHSLHSSQSHRSRRSSFSSRSQQSEVYRSQPDLTAVYDPTVSTLPVDY
SYGQYPEQMDPGQSFSQYPYTSGYQADNSTWVVAEQPPPRPVTPEKYSVSHRCARFGPGG
QLIQVLPNLPSAGQPALVEIHNMETMLQDTPDQSELRSFPGPLLKEETHKVDVIKFSQNK
GLECARNNDLLDKDSAALLWDFIVLLCRQNGTVVGTDIADLLLKEHRSVWLPGKSPNEAN
LIDFNNEPLARAEEEPGTGPLSLLSDTFMTVPENIGKETERFRELLLFGRKKDALEAAMK
GALWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPASATCCGDEKWG
DWRPHLAMVLSNLTHTLDLDTRTITTMGDTLASKGLTDAAHFCYLMAQVGLGVFTKKSTK
MVLIGSNHSLSFFQFASNEAIQRTEAYEYAQSLGSQPCSLPNFQVFKLIYACRLAEAGLC
AQAFHYCEVISRSVLMQPSYHSPVFTSQLMQMSEKMRFFDPQLKEKADQELFNEPEWLIN
LRQLDGQMRTGVIAYNADRDTPQQYDCSTPNSELDQSSPPEPYAQPLDMVGHTSDNPLMT
SLMPGPPQQGVQLMPPAPPTILQDGMVSQPPHPNEGVQFYPVPPSLPGPPGQIPLSGFPP
QGSGFVQPYQPQQPQLDKRDMFPGAQHQQMAPPQHQQQMMPPQMQQPQKMPSDNYQPTGP
PELQPPPMSTSPQRNTFTPQMDFYDQMAHMGPGRRSRTTSQSSMQMQPPGRRSRTMSESS
THSGGRERSNSAAKQSSPPPPSIPEQAKKDSPKKGGGGGGGGWLNWLYRKGKNEAHLPDD
KNKSIVWDEKKQKWVNLDEPEEEYKPPPPPPSGFPKMLGPIPGQGGPGGPPTGGPPVNMF
SRRAGTKSRYVDVLNPGGPRAKPGGSAPAPSDFFAPLAPMPMPANLFVPGAEEQQPMMGN
VPETGGNQEQSDPNPSAVPQMFNPTLLPPGPVGPPIAAGSPSGELSRSSSMSSLSLELSP
HINQVPPTPQPPPQGAPPSGGVTFYNPAQFAQASTPSGRLLSGRLGGQRAYPVLK
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctcctcggaccggcccccctggtgcatctggcccacctcctgccggcgtt
gggcccaatgccttccggaggacaaggccccacaagcatacaggagcagcggtcatggcg
ggactaccagcccagcccatgacagacccctttgcatttggcaggcaagcccctcctcct
atggctacaggtcacctgccgccacccaatagcagccctctgcctttgccagccctgcct
cccggtatgtaccaccaggctggcatgggtcaggggctgcaccaatcacaaccactggat
agtgcacaggctggggctgtgccccttggcccaccaccgccctctacccctggggtaagc
atcttaacccctcacggtactgcgtcccctgtccctttccctgtacagcaacctggcccg
ccaggcaatgcaccaccaagtgcagaacagggctattttaactctagggagccagcaccc
tcgatgaccccaggacaccttcccatggcctcagcccctatgtctggccaagcgccttat
ggccaggaccacggaggagactatcaccctcaggcgatgccctttaagcctgtgcctccc
gttttgtctcagtgggtgcccgaccatgggagccgcccgccgtcggttcagaactatttc
caacccactagtgatcctctaccccaggtttgtaatgcccctccccagtcccaaatatct
ccacacacacccttgccccacaacacccctccaacacacccccagcagcaacaccagccc
caaccaccacctcagcacccagacaggccaactagctcccagtggtctgacctggcaggt
gcgaacacaccccagcaacacaacgcccattttcaggctcagacctacttcagccagagc
tcagccaccctggactcctggttcaaccagcacccccaggacctggtctaccaccagatg
ggagctggccctggcctggctcggcccgactcagccagaactcactatcggcacgactca
gccgggtctcaccatggatcccactatggatcttaccatgcatcatcccctggcccagcg
ctggtccccttcatcccagacggcaccatctccatgtttttcaaaggaaacgacgtggag
aacgaggagaccctcgccggagagggagccagagcagtgaatgggctccaggacttccag
ccctcctataatcaccagcagatgtcatcccctcaaccccaagccaacccggtggtgggt
gcagaggccacccacagttaccgtgccccccccccacaagctggccaatcattaacctac
atgaacgatggtaactttcctggagctggccaacccatccagcaggaacctgctgaggcc
cagtttgaccatgtggagaacctggagtgtgtgcccaaccaggaggtcctgcccagcgag
cccctgagcaaccctgctgtagcagccgcccacgggggagattgctacgaggcaggcccc
aatctggagacccctgactctgtcccccggcccatacgttctgccagcgtgtcctctagc
tacagcaacttgagccacggcagcggcactggtacagttccacgccggcaccaaggagtg
gtgggcaccttcatccagcaggagagccctcggccctcagaggacgcattctcctcagcc
gctgccggaggctactttgagcagattgacacctctccggccggggatatggctgctgct
taccagagcatcccggagagaatgtgccacagccaaccccctacgcccagtcctcccaaa
cccaccggcattttccaggctagtgccaactcttcctttgagcctgtgcgctcacacagt
gtcgcagtgcgcccagcggaggtggaccgtgcccggatggtggcggagaggggctctgac
tctctgcctgggaacctggagcagcctccagacaaccttgagaatatttacggagcagct
acagggcacactcaagctggggatggagctgggccacctcctcttgcataccctctgagt
cactcccactccaggccctcgtcccgggcacatgtggcccaccggccctgtgagagccct
gccaccaccctgtgggcccaacatgaccccgctagcctgggaaccaacatcctgctggtc
cccgctgcccctccggtccttgccccactgcgagagcccagtgcagaggtcatccagccc
cccgaggatggctccttggaccttcagccccctcaacgcgcccctccgccctcccagcac
ccctcggagaacctggagaaccctcctaaggtgagtgagggggacacgtctgactcgcag
cccaatctgggctatgcctctctcctggtgtctgaatcactccaccagcctgtgttgatt
gccccacccacctccaattacagcgtgattcctcccagtaaccctgcactcgcagccaat
caggtcagcctcagggaggccacagtacctgtgaggccacccttgcaggctcaaggggcc
agtgccgtacagcccggtcctcccttgcgctccaatcagaacccattatttgcccttaca
ccgatgagcttcagcgtcgcctctagtcagagccctctcaatcttgttcgggatgacggg
gaaggggttaaaccagagaccacgcccccaccatcccagtcccagcctgctcgctcccct
ctctcaaaggtccaatcaacgtgtagaaccaaccattcttctctacctgttaatttgcag
gctcctcttcctgctgctcctggtgccgccaattataatcagctctcaaattacgaactg
cttgatttttctatgcaccaatctcagattccaaaccaagccgcagggctgccacctctc
tccctccagcagggcccgccactcgcgagtaatgctcctgggttttacctgcaggtcacc
aaagatgctcagcaggtgagtagaggcaatggggacgcctccacagcacagatgcctgcc
gatcccatgccccccccagtggccccaaacacccaacaaccaccctctgagccacccatg
gtaccccagccacagcctgggcaccaaggccaaggagatgaccctgcagcccctctcagt
ggagcaccaccaccgcaagggcagtacccacccccaatgcagggtcctgccacagggaat
gcacccaccccctctgcggcttaccctggacctcggggacatgtgcctctagccaacccc
catccaccaggaaccggggttccttcagcccagccagcccctacagacccaccgcgacct
ccctcgtctctgggaagccagctggggtatggcccacctcccccagggcaggtgtatggg
ggatactacggaggtgcctacccggagtacccagatggcagaggatcatatcttcctgct
cagtacccacccgcacctgtggaccccagagcacagcaatattatcaggatgacccgtac
atgatagcggaccctcgctatggcagatatgaaggagccaacccggcctaccccccatac
agagagccccagccagagagacccagctccagaaccagccagtactcagacagaccctcc
tccaggcaaggtttcccccccgaagaatatcagagagctaaccgaagtgcttatgatgac
tactatgcagagtattacaaaaaccagtacggagaccggagcaggtgggagggctacaat
gcttcagcaggcacttatgacccccgctacagagactactacgaccagaactattggtac
aactacaaccctgaggcctaccggggcagggaggcagcctactacaaccagcagccctcc
cagcagtaccctgccgctaccaccaggccacagggctatgacgacaagtggcgctactat
cctggttacgatgccagttttgacgatgactaccggcggcagagggaccagtacaaggac
gattttgaccgacggagcgtccacagtgaacagtcggcccacagtctacacagctcccaa
agccatcgcagccgacgcagcagctttagctcccgctcacaacagagcgaggtgtacagg
tcccagcctgacctgacagcggtttacgaccccactgtttctaccctgcctgtggattac
tcctatggacaatatccagaacagatggatcccggacagagcttcagccagtacccctac
acctcgggctaccaggcagacaacagcacctgggtcgtcgctgagcagcctcctcctcgt
cccgttactccagagaagtactcggtatcccaccgctgtgcccgcttcggtccaggtggt
cagctgatccaggtgctgcccaacctcccctcggccggccagcctgctctggtggagatc
cacaacatggagacgatgctgcaggacacaccagaccaatccgagctacgctccttcccc
ggaccgcttttgaaggaggagactcacaaggtcgacgtgataaagttctcccagaacaaa
ggcctggagtgtgcccgcaacaacgacctcctggacaaggactcggctgccctcctctgg
gacttcatcgtgctgctgtgtaggcagaacgggacagtggttgggactgacatagctgat
ctgttgctgaaggagcatcgctcagtgtggttgccgggcaagtcacctaacgaggccaac
ctgattgacttcaacaacgagccactggcgcgggccgaggaggagcctgggacgggacca
ttgtccctcctatcagacaccttcatgactgtccccgagaacataggcaaggaaacggag
cgcttcagagaactgctactatttggtcgtaagaaggatgccctggaggcagccatgaag
ggagctctgtggggccacgccctgctgctggccagtaagatggacagccggacacatgct
cgcgtcatgaccaggtttgcgaacagtctgcccatcaacgaccctctgcagaccgtatac
caactgatgtctgggaggatgcccgcctcagccacttgctgtggggatgagaagtggggc
gactggcgcccccatctggccatggtgctgtccaacctgacccacactttggacctggac
acacgtaccatcaccaccatgggagacactctggcttccaaggggctaaccgatgcggcc
cacttctgttacctgatggcccaggttggtttgggggtgttcaccaaaaagagcaccaag
atggttctaatcggctcaaaccacagtctgtcgttcttccagtttgcgtctaacgaagcg
atccagaggacggaggcatatgagtatgcccagtctctgggttcccagccctgctccctg
cccaacttccaggtgttcaaactgatctatgcatgtcgcctggccgaggccgggctgtgt
gctcaggccttccattactgtgaggttatctccaggagcgtgctcatgcagccgtcctac
cactctcctgtgttcaccagtcagctgatgcagatgtctgagaagatgcgattcttcgat
ccacaactgaaggagaaggcagatcaggagctcttcaacgagccagagtggctgattaat
ttgagacagctggatggacaaatgaggactggagtgattgcatacaatgcagacagggat
actcctcagcagtatgactgcagcacccccaattctgagttagaccagagcagcccgcct
gagccatatgcccagcctctggacatggttggccacacctctgacaaccctctgatgacc
tcactcatgcccggaccacctcagcaaggggtgcagctgatgcctccagctcccccaact
atcctccaggacggaatggtctcccagccgccacaccccaacgagggggtccagttctac
ccagtaccccccagtctccctggaccacctggccagatccctttgtcagggttccctccc
caaggctctggctttgtacaaccttaccaaccccagcagccccaactggacaaaagggac
atgtttcctggagcccagcaccagcagatggcgccaccacagcatcagcaacagatgatg
cccccgcaaatgcagcagccacaaaagatgccctctgacaattatcagccgacgggtcca
ccggaactacagcctcctcccatgtccacctctccacagaggaacaccttcacgcctcag
atggacttctatgaccaaatggctcacatgggcccaggaagaagatccaggactacttca
cagtcctcaatgcaaatgcagcctccaggtcgccgctcccgcaccatgtcggaatcttcc
acacactctggaggacgagagaggagcaactcggcagccaagcagtcctctccgcctcca
ccctccatccctgagcaggccaagaaggactcacctaaaaagggaggggggggtgggggt
ggcggttggctcaactggctctataggaaggggaagaatgaagcccaccttccggatgac
aaaaacaaatctattgtctgggacgagaagaaacagaaatgggtcaacttggatgagcca
gaggaggagtacaagccccctcctcctcctccctcgggcttccctaagatgctgggaccc
ataccgggacaagggggtcctggaggtccccctactggtgggccgcctgtcaacatgttc
tccaggagagcaggtacaaagagccgctacgtggatgtcctgaacccaggtggaccccgt
gccaagcccggtggatcggcacctgccccgtcagacttctttgccccgttggctcccatg
cccatgccagccaacctgtttgtgcccggggcagaggaacagcagcccatgatgggtaat
gtcccagagacaggagggaaccaggaacagagcgaccctaaccccagtgctgtgccacag
atgttcaacccaacattgttaccgcccggtccagtggggccccctattgccgctgggtcc
ccgtcaggagagctgtcgcgttctagctcaatgagttctttatcacttgaattgagtccg
catataaaccaggtgcccccgactccgcagcctcctccccagggagctccaccctctgga
ggcgtgacgttctataaccccgcccagtttgcacaggcgagtactccatcgggacggctt
ctgtctggaaggttgggcggtcagagggcatacccagtgctgaagtag
DBGET
integrated database retrieval system
