Oncorhynchus gorbuscha (pink salmon): 124048680
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Entry
124048680 CDS
T07892
Name
(RefSeq) protein ERGIC-53-like
KO
K10080
lectin, mannose-binding 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124048680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124048680
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ogo04091
]
124048680
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
124048680
Lectins [BR:
ogo04091
]
L-type lectins
124048680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
RebB
Lectin_legB
GCN5L1
DUF5063
Motif
Other DBs
NCBI-GeneID:
124048680
NCBI-ProteinID:
XP_046225652
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All DBs
Position
LG11:complement(43175080..43200756)
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AA seq
506 aa
AA seq
DB search
MAVSIGRCLAVDACLLILTLTFHHSNADNIVAGASTEEAPHRRFEYKYSFKGPHLSQTAG
IIPFWVHSGNAIPSADQVRITPSLRSQKGSVWTKNTVNFDHWEAEVTFRVSGWGRMGADG
LAIWFTTAQGQDGPVYGAADNWNGIGIFFDSFDNDGKKNNPAVLVVGNNGKLVYDHPNDG
TTQALGTCLRDFRNKPYPVRAKITYYKKTLTVLINNGFTPDKDDYEFCTKVDNMIIPQEG
YFGISAATGGLADDHDVLSFLTFRLTEPGHELPAPEAEMPKEEQDKYQEEFENFQQELDK
KKEDYQKEHPEVRREPIEDMYESVNDREIRQVFEGQNQIHLEIKQLHRQLAMILDEQNRY
VSVVTDEISKRQVELVGQAPSQEMGAVVATQQEILGNLNELRNSFHESLKQIGATPHQAN
MGTYETVQHFSEIQEHLHVVKRNIEHLITRNGSPSENRGEKCPDPPKMPSCLGTIHFLVF
VVIQSVLFFSYIVYKSQQEAAAKKFF
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccataggaaggtgtctggctgtggatgcttgtttattaatattaacttta
acatttcaccacagtaatgccgataatatcgttgccggtgcatcgactgaagaagctcca
caccgtcgatttgaatacaagtacagtttcaagggaccgcacctgtctcaaaccgccggg
attattcctttttgggtacacagtggaaatgccatccccagtgccgaccaggtccgtatc
accccctctctcaggagtcagaagggctcagtctggaccaaaaacacggtcaactttgac
cactgggaggctgaggtgacctttcgtgtgtctggatgggggaggatgggagccgacggc
ctcgcgatatggttcaccactgcacaaggccaagatggtcctgtctatggagctgctgac
aactggaacggcatcggcatcttctttgattcctttgacaacgatgggaagaaaaataac
cctgctgtgctggtggtgggaaacaatggcaaacttgtttatgatcacccaaacgatggc
acgactcaagccctgggaacatgcttaagagactttcgtaacaaaccctatcctgtcaga
gccaaaataacatactacaagaagacactaacggtgctgatcaacaatggtttcacgcca
gataaggatgactatgagttctgtaccaaggtggacaacatgatcattcctcaggagggc
tactttggcatctcagctgccacgggtggtctagcagatgaccatgatgtcctgtccttc
ttgacgttcagactaacagaacctggccatgaactgcctgcacctgaagcagagatgccc
aaggaggagcaggacaagtaccaggaggaatttgagaactttcagcaggagctggacaaa
aagaaagaggactatcagaaggagcatccggaagtccggagagaacccatcgaggacatg
tacgagagtgtcaacgacagggagatccgccaggtgtttgagggtcagaaccagatccac
ctggagatcaaacagcttcaccgtcagctggccatgatcctcgacgaacagaaccgctat
gtttctgtggttacagacgagatatccaaacgccaggtggagttggtgggacaggctcct
agtcaagaaatgggtgcagtggtcgcaacacaacaggagatactgggaaacctgaacgag
ttgagaaactctttccatgagtctctgaagcagatcggtgccactccgcaccaagccaac
atggggacatatgagacggtgcaacacttcagcgaaatccaggaacatctacacgtggtc
aagaggaacatcgaacaccttatcacacgcaatgggagccccagtgaaaatcggggagag
aaatgccctgaccctcctaaaatgccttcctgtctgggtactattcacttcttggtcttt
gtggtcatccaatcagtcctgttcttcagctacatcgtgtacaaaagtcaacaagaagca
gcagcaaagaaattcttttga
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