Oncorhynchus gorbuscha (pink salmon): 124048756
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Entry
124048756 CDS
T07892
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124048756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124048756
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
124048756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
124048756
NCBI-ProteinID:
XP_046225768
LinkDB
All DBs
Position
LG11:45854293..45906299
Genome browser
AA seq
2663 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPIMPQ
YKMSQNSMHGSPASTNYQQSTISHSPSSRFASPQMGSGARFTPQQNSPVSSPYAPQSPAS
YMQQYPHPPSYSQHQQIQQVASPVVPASMRNIHDNKVSGQISSNSANHNARHGSNEDYMN
IVHRLGNEESDPSMRNASFPLRSPQSVSSPVGSEGTPKGSRPGLILQSPPPYAPPRDAAP
DLLLDSPDHKKKQKKLTKEEKEQLEKAAMYDIVSSPSKDSTKLTLKLSRVKSSELDQSGE
LLSGVEDQDTDLAYNSLQFSRTQQDPAHRLAPGQGEQSGYQQVPVLQNTKQAIGVISGAV
YDDAEMDALAEIERIERETLIERERCSKEVQDKDKPLKKRKQDSYPQEPGAGGTAGATQP
GVGGGNVGSKLAPQEASAASNGASRPALMVSIDLQQAGRADGQPEVNMGTPTPAVEARRW
PEERLGPEEGSDSTGVLRLKSKTDGERLQTADGRPEVIKQRADTPKKLGPDGRPETPKHK
HENRRDSSKHRHDGKPDNGKARPESRTPDTPRQRHEGRSDSGHREERSRDSDPSRIRRPE
TPSKSSRGEHDSKHGRDRDRERADKDRERKHRTEAGEPRDRRSPEQRSRPESPRVKQEGR
GVVDPSGRQRTDRPCPNLKPPNKEEKRSGDGSRNRQDSKQQQQPVESKQEFPAYLLGGVK
SGGFKNFVIPKMKRDKDGHVLAAEIRKPGSGLGPVMEGWSEPRVKLERLGLVEEMKTGAK
PVVVLQKLSIDEVQKIIREREDRNARGSKSSKSRHSHEKSGKGGLDESVLKELPPHLIAE
IESTMPLCERVKMNKRKRSTVNEKPKYAEVDSDDSDDDSVTESARKRHKKEREKTWAPDE
RERRGSGEHRRSTGGSQERRKGSGRRYRERSSEESDEESPPPSMSELARKMKKEKQKKRK
SYEPKLTPEELMDSSTFKRFSASVDNILESLEDIDFNAMDDDEIPQELLLGKHQLSELGS
ESAKIKAMGITFRLPSDKLVKVLNILEKNIQDGSKLSTLMNHDADAEDEERLWRDLIMER
VTKSADACLTALNIMTSSRMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVNPHGG
GYLSSRAKRAKSSTHKQRVIIMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFF
VESVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDKDGE
PMYIQMVTALVLQLIQCVVHLPSNRDSHDDEYNKKVDQDVLITNSYETAMRAAQNFLSVF
LKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPASELLLSLLGRLLVHQFSNKQTEMAL
RVASLDYLGTVAARLRKDAVTSQMDQRSIDRILKETQGNDETQQLQKALLAYMDENAETD
PSLVFARKFYIAQWFRDTLTETEKAMKSQNQRGDEDSSEGQHHAKDIESTGEIMQRAEAR
KKYLRNIIKTAPSQFSTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGE
SAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRP
QLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEGIK
KLVNETFQKLWFTPTPNHDKDAMTRKILNITDVVSACKDTGYDWFEQLLQNLLKTEEDAS
YKPARKACVQLVDNLVEHILKYEESLADIENKGVNSNRLVSCITTLFLFSKNRAQLMVKH
AMTMQPYLTTKCNTQSDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLTIKYGMT
VVQHCVSCLGAVVNRVTHNYKFVWACFNRYYGALTKLKTQHSEDCNNPVLAANKPALLRS
LFTVGALCRHFDFDQEEFKGPSKVVIKDKVMELLLYFTKHEDEEVQTKAIIGLGFQFIQY
PGLMFMQDVKTLYNGILSDRKSSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKKLSKQED
LKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSNVRHFALNVIALTLNQGLIHPVQCVPYL
IAMGTDPEPTMRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAIWSAKGTVIRGYR
QDETTSALCAHLFSMVRTNRQHRRAFLISLLNLFDDSSKMEVNMLLYIADNLACFPYQSQ
EEPLFIMHHIDITLSVSGSNLLQSFKESLLKEPRRREKKPKERKYHSEEDNSEEEGRHSS
RSNSSDDEVVHRPKKPKHRAQAHVESDSDSDLEMEDLDKVMQRLPDNPIPLLDFANASQG
ILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYEKAVNRKSHVHFSPRQTLDFLTSDLA
NVELTYDIKRRIVKQYLDFKLLMEHLDPDEEDEEGEASASANARNKAITSLLGGSSHQDH
KNHHQAPIETDDDESDGDEKTPGLSRRSRKHGDSAEASGHMNETVGSMDVIALCCPKYKD
RPQIARVIQKTNTGYRVHWMAGSYSGVWAEAKKRDGRKTVPWVDTIKESDIIYKKIPLTS
AHKLTNRVVQTLRSLYSAKDGTS
NT seq
7992 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccattactactcttgctgggatcgctagccttaca
gacttgttaaaccagctgcccctgccatcccctctccctgccaccaccactaagagtctg
ctgtacaatgggaggatcgcggaggaggtcaactgtctgctggcctgccgggatgagaac
ctggtgtcccagctggctcacagcctcaaccaggtttccaccgagcacatagagctgaag
gacaacttgggcagtgatgacccggagggtgacgtgcctgtgctgctgcagacagtgctc
tctaggaaccccaacatcttcagggagaaaaatataatgcagcagccaataatgccgcag
tacaagatgtcccagaattccatgcatgggagtccggcgtcgacaaactaccagcaatcc
actatctcacacagcccttctagtcgctttgcatctccacagatggggtctggcgctagg
ttcacgccccagcagaacagccctgtgtctagcccttatgccccccaaagccctgcaagt
tacatgcagcagtaccctcacccccccagctattctcagcaccaacagatccagcaagtt
gccagtcccgtggttcctgctagcatgcggaacatccacgacaacaaggtttccgggcaa
atttcaagcaactcagccaatcacaatgccagacatggctcgaacgaagactacatgaac
atagtccacagactagggaatgaggagagtgatccttccatgagaaatgcctccttccca
ctccgatcgccccagtctgtttcttcccctgtgggcagcgaagggaccccaaaagggtca
cgacctggcctcattctgcaatcccctccaccttatgctcccccccgtgacgccgctccc
gacctcctcctggactctcctgaccacaagaagaagcagaagaagctaactaaagaggag
aaagagcagttggaaaaagctgccatgtacgacattgttagctctccctctaaagactcc
accaagctgaccctcaaactgtcacgggtgaagtcctctgagttggaccagtccggagag
ctcctatccggggtagaggaccaggacactgacctggcctacaacagcctgcagttctcc
cggacgcagcaggaccctgcccacagattagccccaggccagggggagcagtcaggctac
cagcaggtccctgtgctccagaacaccaaacaggcaataggggtgatcagcggagctgtg
tacgacgatgctgagatggacgctctcgctgagatcgagaggatagaacgggagacgctc
atagaaagggagcgctgctccaaagaggttcaggataaagacaagccactgaagaagcgg
aagcaggactcgtatccccaagagcctggcgctggtgggacagcgggggcaactcagcct
ggtgtgggagggggcaatgttggcagcaagttggcaccccaggaggcaagtgcagccagt
aatggtgccagccggccagccctaatggtcagcatcgacctgcagcaagcaggcagagct
gacgggcagccagaggtgaacatgggcacccccaccccagccgtggaggcccggcgctgg
cccgaggaacgcctgggtccagaggaaggctccgactctaccggagtactgcggctaaag
tccaagacggatggagagcgactacagactgcagacggccggccagaggtcatcaagcag
cgcgccgacacccccaagaagctgggccccgacggccgaccggagacccctaaacacaag
cacgaaaacagaagagactcatccaaacatagacacgacggaaaacctgacaatggcaag
gcccgacctgagagcaggacgcctgacacgccacgacaacggcacgagggccgctcagac
tctggtcacagggaagagaggtctcgggacagcgacccatcccgtatccgcaggccagag
acccccagcaagtccagcaggggggaacacgactccaaacatggacgggacagagacagg
gagcgggcggataaagacagggagaggaaacacaggacagaggcaggggaaccacgggac
cgccggtctccagagcagcgctccaggccagagagcccgcgagttaagcaggagggccga
ggggtggtggaccccagtgggcgccagaggactgaccggccatgccccaacctcaaaccc
cctaataaagaggagaagaggagtggggacggcagcagaaaccgacaggactccaagcag
caacagcagcctgttgaaagcaaacaggagttccctgcctacctgctagggggggtaaag
tctggaggttttaagaactttgtgattcccaagatgaagcgggataaggatgggcatgtg
ttggcagctgagataaggaagcctgggtctggtctggggcctgtaatggagggctggagt
gagccccgggtcaagctggagcgactgggactggtagaggagatgaagacaggagccaaa
cctgttgtggtgctgcagaaactcagcatcgacgaggtgcagaaaatcatcagggaaaga
gaggacaggaacgcacgcggctccaagtcctccaagagcagacactcacatgagaagtct
gggaaaggaggtcttgatgaatcagtgttgaaagaactgcctcctcatctcattgctgag
atagagtccaccatgccactgtgtgagagagtgaagatgaacaaacgcaagcgcagcacc
gttaacgagaagcccaagtacgccgaagtcgactccgacgactcagacgacgactctgtg
acggagtctgcacggaagcgtcacaaaaaggagcgagaaaagacgtgggcgcctgatgag
cgggagaggagaggctcaggagagcaccggaggagtactgggggctcccaggagcggcgc
aagggatctggcaggcgctaccgagaacgcagctcagaggaatcggatgaggaatcccca
ccacccagcatgagtgaacttgccagaaagatgaagaaggagaaacagaagaagaggaag
tcatacgagcccaagctgacaccagaagaactgatggactcctccacgttcaagaggttc
tcagccagtgtggacaacattctggagagcttggaggacattgacttcaacgccatggat
gatgatgagatcccacaggagcttctgctggggaaacaccagctgagcgagctgggcagc
gaatctgctaagatcaaggccatgggcatcaccttcaggcttccatctgataagttggtg
aaggtcctgaacatcctggagaagaacattcaggatggttccaagctctccacactgatg
aaccatgacgcagacgcagaagacgaggagcggctgtggcgtgacctcatcatggagcgc
gtgaccaagtctgctgacgcctgtctgacggccctcaacataatgacgtcgtcccgcatg
cccaaggcggtgtacatcgaggacgtgattgagagggtgctgcagtacaccaagtttcac
ctgcagaacaccctctaccctcagtatgaccctgtctacagagtgaaccctcatggaggt
ggctatctgagctccagggctaagagagctaaaagctccacacacaagcagagggtgatc
atcatgctctacaacaaggtgtgtgacatcgtcagcaacatctctgagctcctggagatc
cagctgttgacggacaccaccatcctacaggtctcctccatgggcatcactccattcttt
gtggagagtgtcagtgagctacagctgtgtgccatcaaactagtgaccgcggtgttctct
cgttatgagaagcacaggcagctcatcctggaagagatcttcacctctctggccagatta
cccaccagcaaacgcagcctcaggaacttcaggctgaacagcagtgataaggatggggag
cccatgtacatccagatggtcacagctctggtgcttcagctcatccagtgtgtggtgcac
ctccccagcaacagggacagtcacgacgacgagtacaacaagaaggtggatcaagatgtc
ctgatcactaactcttatgagacggccatgagagcagctcagaacttcctgtccgtcttc
ctaaagaagtgtggcagtaagcagggagaggaggactaccggccgctgtttgagaacttt
gtccaggacctgctgtctacggtgaacaaaccagagtggccagcttcagagcttctcctc
agtctgctgggacgtctactggtgcaccagttcagtaataagcagacggagatggctctg
agggtggcatcgcttgactacctgggcacggtcgctgcccgcctgcgcaaagacgcagtc
accagccagatggaccagcgctccattgaccgcatcctcaaagagacccaaggcaatgat
gagacccagcagctacagaaagccctgctggcctacatggatgagaacgcagagacggat
ccatctctagtttttgccaggaagttctacatagctcagtggttcagggacactttgaca
gagacagaaaaggccatgaagtctcagaaccagcgaggggacgaggactcttctgaaggc
cagcaccacgccaaggacatcgagagcactggcgagatcatgcagagagctgaggcccgc
aagaagtacctccgcaacatcatcaagaccgcgccctcgcagttcagcacactgaggatg
aactctgacactgtggactatgacgactcctgcctgattgtcagatatttggcctctatg
aggccgttcgcgcagagcttcgatatttatttaacacagatcctgagagtgctgggggag
agtgccatagctgtcagaactaaagccatgaagtgtttgtctgaggtggtggctgtagac
cccagtattctagccaggttggacatgcagcgtggggtccatggtcgtctgatggacaac
tccaccagtgttcgcgaggctgcagtggagctgctgggacgctttgtgctgagcagaccc
caactcacagagcagtactacgacatgctgatcgagagaatactggacacgggtatcagt
gtgaggaagagggtgatcaagatcttgagagacatctgtctggagcaacccaccttcaac
aagatcactgagatgtgtgtcaagatgatccgcagggtcaacgacgaggagggcatcaag
aaacttgtgaatgagaccttccagaaactctggttcacccctacacccaatcacgataaa
gacgccatgacccgtaagatcctcaacatcacagacgtggtgtctgcatgcaaagataca
ggctatgactggtttgagcagctgcttcaaaacctgctgaagactgaggaagatgcttcc
tataaaccagccagaaaggcctgcgttcagctggtggacaatctagtggaacacatcctc
aaatacgaagagtctctcgctgatattgagaacaagggggtgaactctaatcgtttggtg
tcttgcatcaccaccctcttcctgttcagtaagaatcgagcccagctgatggtcaaacat
gccatgaccatgcagccttacctcaccaccaagtgcaacacccagagtgacttcatggtg
atctgtaacgtggccaagatcctggagctggttatccctctgatggagcacccctctgag
accttcctcaccaccatagaggaagacctgatgaagctcaccatcaaatacggcatgacg
gttgtgcaacactgtgtgagctgtctcggcgctgtcgtgaaccgggtcactcacaactac
aagtttgtttgggcttgtttcaaccgttactatggtgccctgaccaagctgaagacccag
cactccgaggattgcaacaaccctgttctggctgctaacaaaccggccttgctgcgctcg
ctgttcactgtgggggcgctctgtcgccactttgactttgaccaggaggagttcaagggg
cccagcaaggttgtgataaaggacaaagtgatggaacttctgctgtacttcaccaaacat
gaagatgaggaagttcagaccaaggccatcattggtctaggcttccagttcatccagtac
ccagggctgatgttcatgcaggatgtgaagactctgtacaacggcatcctgtcggacagg
aagagctccgtcaacctgaagatccaggtgctgaagaacctgcagacatacctgcaggag
gaggattctcgcatgcaggaggccgaccaacagtggaagaagctgtcgaagcaggaggac
ctgaaggagatgggggacatctcttcaggcatgagcagctccatcatgcaactgtacctg
aagcaggtgctggaggccttcttccacacacagtccaacgttcgacactttgccctcaac
gtcatcgctctgacgctcaaccagggcctcatccatcctgtgcagtgtgtgccctacctg
attgccatgggaacggacccagagcccaccatgaggaacaaggctgaccagcagctggtg
gagattgataagaagtacaccggcttcatccatatgaaggccgtggcggggatgaagatg
tcctaccaggtacagcaagctatctggtcagctaagggtacggtgatccgtggctaccgg
caggacgagaccacctcggccctctgcgcccacctcttctctatggtccgaaccaaccgg
cagcaccgacgagccttcctcatctcactgctcaacctgtttgatgacagctcgaagatg
gaggtaaacatgctcctgtacatagcagacaacctggcctgtttcccctaccagagccag
gaggagcccctgttcatcatgcaccacatagacatcaccctgtctgtgtctggcagcaac
ctgctgcagtccttcaaggagtcccttctcaaagagccgaggcggcgggagaagaagccg
aaagagaggaagtaccactcggaggaggataactctgaggaagaggggcgtcacagcagc
cgctccaacagcagtgacgatgaggtggtccacaggcccaagaagcccaaacaccgggcc
caggcccacgtggagtctgactctgactctgacctggagatggaggacttggacaaggtg
atgcagcgtctgcctgacaaccccatccccctgttggactttgccaacgcctcgcagggt
atccttctgctgctggttctcaagcagcacctaaagaacctctatggcttctcagacagt
aaaatccagaagtactctccgacggaatcggctaaggtgtacgagaaggctgtgaacagg
aagagtcacgtacacttcagcccacgtcagacattggattttttaacctctgacctggcc
aacgttgaactgacctacgacatcaagaggaggatcgtcaaacagtacctagatttcaag
ttactgatggagcacttggaccctgatgaagaggatgaggaaggtgaggcgtcggccagc
gctaacgccagaaacaaagccatcacttcactgctgggagggtccagtcaccaggaccac
aagaaccaccatcaggctcctatagagacggacgacgacgagagcgacggagacgagaaa
accccagggttatcacgaagatccaggaagcacggcgactctgcggaggcatcaggtcac
atgaacgagacggtaggttccatggacgtcatcgccctctgctgccccaagtacaaggac
cggccacagatcgcccgcgtcatccagaagaccaacacgggctacagggtgcactggatg
gctgggtcctactctggagtctgggctgaggctaagaaacgggacggacgcaaaactgtg
ccttgggtggacactatcaaggagtcggacattatttacaagaaaatacccttgacgagt
gcacacaagctgacgaacagagtggtgcagactttacggtcactgtactcagccaaggac
ggaacttcctaa
DBGET
integrated database retrieval system
