Oncorhynchus gorbuscha (pink salmon): 124049005
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Entry
124049005 CDS
T07892
Name
(RefSeq) neurofilament medium polypeptide-like isoform X1
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124049005
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
124049005
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
124049005
NCBI-ProteinID:
XP_046226225
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All DBs
Position
LG11:57572102..57577676
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AA seq
1312 aa
AA seq
DB search
MSYHPVDTIGSPFRRSMDSRTTYGRSTGTPSSGFRSQSWSRASPGSTMTSSYKRSVNMPV
ARAYSSTLLSSADSVDFNQTNGDYKRSNEKEQLQGLNDRFAGYIDKVHYLEQQNSQIEEE
IQTLRQKQVSQSQLGDLYDQELQELRSMLEHIHHDKAQIQLDTDHIEDDIQRIRDRFDEE
ARIRDETEGIIRALKKDMTDSDLVKSEFEKKVQSLHDEIAFIRNNHEEEVSDLFAQVQAS
QVTMERKDIQKTDITEALREIRTQLEGHSNQNLQQVEDWFMCRYSKLTDAAAQNKDAIKS
ARDEIADYRRQLQSKTVELESVRGTRESLERQLNDIEDRHNNDLSSLQETIHQLDNELKG
TKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYCHTVTSSKKSKYEPP
KLKVQHKFVEEIIEETRVEDEKDEMDQALAEMAQEFSATLEAEATDEGEDEGEEGGEEAE
GEGGEGESEEVVASTEAQVSSSMPAEEEEEDKEGNDEVEEGEKEEEGEKGEEGEGEKGDD
TEGGDEGEGEGEFEETVLCSKAPESKASPDKEKAGEDGSGGEEETGEGEGEEEGDDQDED
AGSDKGSKDGDDKDEEDEKKGKDEKEDKTDEKASVAKTEAPKTEAPKSEAPKVEVQKAES
PKPSKPDSLKVESPKAGSPKSESPKAGSPKHESPKAVTPKTESPKPGSPKSESPKPAGSP
KSESPKPSGSPKSESPKPSGSPQSESPKPSKPDSLKVESPKAVSPKCESPKAVTPKSESP
KSESPKPGSPKSESPKPSGSPKSESPKPSGSPKSESPKPAGSPKSESPKLAASPKSESTK
PAGSPTSESPKPSGSPKSESQKPAGSPKSESPKLAGSPKSESPKPAGSPTSESPKPAGSP
KSESPKPAVSPKSEYPKLTGSPKSESPKPAGSPKSESPKPSGSPKSESPKPSGSPKSESP
KPAGSPKSKSPKLAGSPKSESPKRAGSPTSESPKPAGSPKSAGSPKSESPKLAGSPKSES
PKPSGSPKSESPKRAGSPTSESPKPAGSPKSAGSPKSESPKLAGSPKSESPKPAGSPTSE
SPKSAGSPKSESPKPAGSPKSESPKPAGSPKYESPKPAGSPTSQSPKSAGSPKSESPKPA
GSPKSESPKIGSPEAESPKGEAPKPEAPMSEAPKAAEEKVDKKSDSKEERTVEKKDAAMK
GDVEKITPEDKDKKDEAGKEAEEKDVISNGVDESPTKDDPDQKDDPKDQKVVITKTVETI
TTGEDGAKHVTKSVTVTETVKESEDVMQEKTVSSKKMEKHSSQSVKVVTETE
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccacccggtggacacgatagggagtccattcagaagaagtatggatagtagg
accacctacggccgctccactggcaccccctccagcgggtttcgttctcagtcctggtcc
cgggcaagcccaggctccacgatgacctcctcctacaagaggagcgtcaatatgccggta
gccagagcgtacagctccacactcctcagctccgccgacagcgttgatttcaatcaaacg
aacggagactacaagcgctccaacgagaaagagcagctccaggggctcaacgaccgcttc
gccggttacatcgacaaggtgcactacctggagcagcagaacagccagatcgaagaggag
atccagacgctgcggcagaagcaggtgtcgcaatcccagctaggcgatttatacgaccag
gaactccaggagctgcgctccatgctggagcacattcaccacgataaagcgcagatccag
ctcgacacggaccacatcgaggatgacatccagagaattagggaccgcttcgatgaggaa
gcccgcatcagggatgagacggaaggcatcatccgggcgttgaaaaaagatatgaccgac
tctgatttggtgaagtcagagtttgagaagaaagtccagtcactgcatgacgagattgcc
tttatccgcaacaaccacgaagaagaggtgagcgacctttttgcccaggtgcaggcgtcg
caggtgaccatggagaggaaagacatccagaagacggacatcaccgaggcgctccgggag
atccgcacccagctcgagggccactccaaccagaacctgcagcaggtggaggactggttc
atgtgccgctattccaagctcactgatgctgcggcacaaaacaaagatgcaatcaagtcc
gcccgtgatgagatagcagactaccgtcgccagcttcagtccaagaccgtggagttagag
tccgtccgtggaaccagggagtcactggagaggcagttgaatgacatcgaggaccgacac
aacaacgacctgtccagcctgcaggagaccatccaccagctggataatgaactcaagggc
acgaagtgggagatggcgcgtcatctgcgtgagtaccaggacctgctcaatgtcaagatg
gccctcgacattgagattgctgcatacaggaaactcctagaaggtgaagagacccacttt
agcactttcccctactgccacaccgtcacctcctctaagaagtccaagtatgagcctccc
aaactgaaagtccagcataagtttgtagaggagatcatcgaggagaccagggtagaggat
gagaaggatgagatggaccaggccctggctgagatggcccaggagttttctgccactctg
gaggcagaggcaacagatgaaggagaggatgagggagaagagggaggagaagaagcagag
ggagaagggggagagggtgaatcagaagaggttgtagcctccactgaagcccaagttagc
tccagcatgcctgctgaggaggaagaggaggacaaagaaggcaatgatgaagtggaagag
ggagaaaaagaagaagagggtgagaaaggagaagagggtgagggtgagaagggagatgat
acagaaggtggtgatgagggagaaggagagggggaattcgaggagacagtcctgtgctct
aaagccccagaatcaaaggcctctcctgacaaagagaaggctggagaggatggaagcgga
ggagaagaggagacaggagagggagagggagaagaggagggtgatgatcaagatgaagat
gcaggtagtgacaaaggatccaaagatggagatgataaggatgaggaagatgagaagaaa
ggaaaggatgagaaagaagacaaaacagatgagaaggcatctgtagccaagacagaggct
cccaaaacagaagcccccaagagtgaggccccaaaagttgaggtccagaaagctgagtcc
ccaaagccctccaagccagactccctaaaagttgaatccccaaaggctgggtcccccaag
tctgagtccccaaaagctggatcccccaaacatgaatctcccaaagctgtaactcccaaa
actgaatctccaaaacctggctcccccaaatctgaatccccaaaacctgctggatccccc
aaatctgaatccccaaaaccttctggatcccccaaatctgaatccccaaaaccttctgga
tcccctcaatctgagtccccaaagccctccaagccagactccctaaaagttgaatcccca
aaggctgtgtcccccaagtgtgagtccccaaaagctgtaactcccaaatctgaatctccc
aaatctgaatctccaaaacctggctcccccaaatctgaatccccaaaaccttctggatcc
cccaaatctgaatccccaaaaccttctggatcccctaaatctgaatccccaaaacctgct
ggatcccctaaatctgaatccccaaaacttgctgcatcccctaaatctgaatccacaaaa
cctgctggatcccccacttctgaatccccaaaaccttctggatcccctaaatctgaatcc
caaaaacctgctggatccccaaaatctgaatccccaaaacttgctggatcccctaaatct
gaatccccaaaacctgctggatcccctacttctgaatcccccaaacctgctggatcccca
aaatctgaatcaccaaaacctgctgtctcccccaaatcagaatacccaaaacttacagga
tcccctaaatctgaatccccaaaacctgctggatcccccaaatctgaatccccaaaacct
tctggatcccccaaatctgaatccccaaaaccttctggatcccctaaatctgaatcccca
aaacctgctggatcccctaaatctaaatccccaaaacttgctggatcccctaaatctgaa
tccccaaagcgtgctggatcccccacttctgaatccccaaaacctgctggatcccctaaa
tctgctggatcccccaaatctgaatccccaaaacttgctggatcccccaaatctgaatcc
ccaaaaccttctggatcccctaaatctgaatccccaaagcgtgctggatcccccacttct
gaatccccaaaacctgctggatcccctaaatctgctggatcccccaaatctgaatccccc
aaacttgctggatcccctaaatctgaatccccaaaacctgctggatcccctacttctgaa
tcccccaaatctgctggatcccctaaatctgaatccccaaaacctgctggatccccaaaa
tctgaatcccccaaacctgctggatcccctaaatatgaatccccaaaacctgctggatcc
cctacttctcaatcccccaaatctgctggatcacctaaatctgaatccccaaaacctgct
ggctcccccaaatcggaatcccctaaaataggatcccccgaggcagagtcccctaagggt
gaggcccccaaaccagaagctccaatgtcagaggcccccaaggctgcagaagagaaagta
gacaaaaagagtgattcaaaggaagagaggacggtagaaaagaaagacgcagccatgaaa
ggagatgtggagaagattaccccagaggacaaggacaagaaggatgaggctgggaaagag
gcagaggagaaggatgttatctcaaatggagtggacgagagccccactaaagatgacccg
gaccagaaagatgatccaaaggaccagaaggtggtcatcaccaaaacggtggagaccatc
accactggagaggatggggccaagcatgtcaccaaatcggtcactgtcaccgagactgtg
aaggagtctgaggatgtgatgcaggagaagacagtctccagcaagaagatggagaaacac
tcttcccagtccgtcaaggtggtaactgaaactgagtaa
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