Oncorhynchus gorbuscha (pink salmon): 124049043
Help
Entry
124049043 CDS
T07892
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124049043
04020 Calcium signaling pathway
124049043
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124049043
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124049043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
124049043
NCBI-ProteinID:
XP_046226295
LinkDB
All DBs
Position
LG11:complement(60095681..60328201)
Genome browser
AA seq
2503 aa
AA seq
DB search
MERRAPNYSKWAERRSTVVYAMRSATFGSWRMLTLGTEYSSWAQSPESLRQQQAVISENA
EETDSINIDSSWQQMDVPQQYDAILHLDERAASGGSRGNHNIIRTHEALNSTPWSKSNRM
ARFAEGLPTRFGAGAGGGGRGAPGAGRGGARAGGPPGGQRMYKQSMAQRARTMAIYNPNP
VKQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYLILATIIANCIVLALEQHLPENDK
TPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVG
SDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGVE
FYMGKFHSTCFTVDTGERAAAFPCGTEAPARMCPNGTECTEYWIGPNYGITNFDNILFAV
LTVFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERE
RVEKRQDFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDENAEEKSPLDGAWYKRKHNL
PVLKRGKVKKSKNDLIGAEEGEDHFTDMSSVAPPGSPFGRTSVKSSKLESSSYFRRKERR
IRFFIRRMVKAQSFYWVVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFLSEMS
LKMYGLGARNYFHSSFNCFDFSVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTK
YWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFP
AAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVD
NLANAQELTKDEEKQEEEANKKLALQKAMEVKEVSPMSAANISIAAFVKQNRDALSRSSS
VSSVHSPKEQQRANKIMSVWEQRTNQLRRNNLRASSEALFNELDPEERLRVSSALHLRSD
MKTHNDRPLVVEPGNGDNPRPPEEDRDGADPQQEGGDPHGPQPRKHYRHRERNGENGESR
HHTHHSRSRDHYHPDGPRSKEGKVERNHSREGGQGHRYHHQAESPEEGVNGGGEGREDRH
HHSDRQGNGALATRDRLESRGRGHREENGERRKHRSRRVRAQSTLDGDECRENEERNGDR
DQGHRDRQTDSQGESLATSPVQPPAGLQAGEKQEDADNQKNSHRASQAGLNSNTVHIPVT
ITAPSRETTIIPMDNTDCESLRLNEEKKDLEEELKNGPKHILPYSSMFVFGQTNPVRRLC
HYVVNLRYFEMCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMI
DLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSGTKGKDINTIKSLRVLRVLRPLKTIK
RLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCR
GKFLDYDGDEVAAQDREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVDATYEDEG
PSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFA
INAKPLTRYMPADKQSFQYKMWQFVVSPPFEYSIMTMIALNTVVLMMKFHGAPEMYEAML
KHLNIVFTALFTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKTDKLINL
SFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNI
ELNEESAINHHNNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDRLSGSGGKECGSD
FAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFVRVWAEYDPAACG
RMTYLDMYDMFRHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTLMALIRTAL
EIKLASGVLAQRLCDADLRKEISRVWPNLPPNTIDLLVTPYKNDEFNELLCPFAVVNREL
TVGKVYAALMIFDYYKQNRAKRLEQQLGLDFTGTIKNKKGPAFFCPMPMTHMQEEGTTVS
RANPLPSSQPEPESQPEPTPSTTTLTNGEAVPSTISPIKESGEQLSQEGQRSSSRKRILQ
RGQSEDVPYSNKPQESVEMRQVENGADIGGYSGLDGHGRAASMPRLDSQYNRNHPRHLPG
TYLAPIADISPIRRSASTLASQCHREKSLRDYTLERPSQAQAQASSAPGQAQDRPHHHHH
HRCHRRRDKDRDKKQKSLDRATSVQPSSTACERGSSVDPLVEGLTRERARERDRGRPHEK
RHHSAAGETKRYYSCERYVAREHCHTKSAGPSRSTSPGETHDLGLLKQSIRMSKGSQVVL
TFGSSPSCRGRRQLPQTPLTPRPAVAYKTGNSLPMQFGSTGHQSFLSRGLSERNALLESP
PIPVTLIGLDPNLSPCPRNAPPCRLPEEPDDFQDAVSNHGGSHSPRIIASASHGAAGPSS
APAPQGRVGIPNGYHFTLGVNAVSSSSPRGTGSFREKEEDDWC
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagggccccaaactactccaaatgggcggaaaggcgatccactgtggtttat
gcaatgcgctctgccacattcggctcatggaggatgctgactttgggcacggaatacagc
tcatgggcccagtctcctgaaagccttcgtcaacaacaggcagtgataagcgagaatgct
gaagaaacggacagcatcaacattgactcgtcatggcagcagatggacgttcctcaacag
tatgatgccatcctgcatcttgacgagagagcagcttcaggagggagtcgtggtaatcat
aacatcattcgtacacacgaagccctcaatagcacgccatggtccaagtctaacagaatg
gctcgcttcgcagaaggtctacccacccgctttggagctggagcaggtggaggaggcaga
ggtgcgcccggcgcaggcagagggggcgcccgggctggtggtcctccaggcggccaaagg
atgtacaagcagtcgatggctcagagagccaggacaatggccatatacaaccctaaccct
gtcaaacagaactgcttcactgtcaaccgatccttgttcatctttcgagaggacaatctc
attaggaagtatgctaagcgaataaccgaatggcctccgtttgagtacttgatcctggcc
accatcatcgccaactgcatcgtactggccctggagcagcacctaccagaaaatgacaag
acccccatgtcagaacgtctggatgacacggagccctactttattggaatattctgtttc
gaggctggcattaagattatcgccttgggctttgcgtttcacaaaggctcgtacctccgc
aatggctggaacgtaatggactttgtggtcgtcctcactgggatcctggccacagtgggc
tcagactttgacctgaggactctgcgagcggtgagagtactgagaccactcaaactggtg
tctggcatccccagtcttcaggtggttttgaagtctatcatgaaggccatggtgcctctg
ctccagataggcatgctgctctttttcgccatactcatgtttgccatcatcggagtggag
ttctacatgggcaagttccactccacctgcttcactgtcgacactggtgagcgagcagca
gcgttcccctgtggtacggaggccccagccaggatgtgtcctaatggtacagagtgtaca
gagtactggatcggccccaactacggcatcaccaactttgacaacatcctgtttgccgtg
ctcaccgtcttccagtgcatcaccatggagggatgggtggacatcctctacaatgctaac
gatgcctcggggaacacctggaactggctctacttcatccccctgatcatcatcggatcc
ttcttcatgctcaacttggtcctgggtgtcttatcaggggagtttgccaaagaaagagag
cgtgtggagaagaggcaggactttctaaagctgcgcagacagcagcagatagagagagag
ctgacaggatacctggagtggatatgcaaggcagaggaggtgctgctggaggaggaggat
gagaacgcggaggaaaagtcccctctggatggtgcgtggtacaagaggaaacataacctc
ccagtgttgaaacgaggcaaggtaaagaagagtaagaatgacctgattggtgctgaggag
ggagaggatcacttcactgacatgtcctctgttgcccccccaggctctccgtttggccga
accagcgtgaagagcagtaagctggagagctcgtcctacttccgccgcaaggagaggaga
atacgtttcttcatccgtcgcatggtcaaagcccagagcttctactgggtagtactatgt
ctggtgggcctcaacaccctgtgtgtggccatcgtccactatgaccagcctgagtggctc
accactgccctctacctggcagagtttgtgttcctgggtctgttcctgtctgagatgagc
ctgaagatgtacggcctgggagccaggaactacttccattcctctttcaactgcttcgac
tttagtgtgataatagggagtatacttgaggtggtgtggtctatgatcaaaccaggggca
tcctatggcattagtgtgctgagggctcttcgtctgctcaggttattcaaatttaccaag
tactggaactccctgaggaacctggtagtgtctcttctcaactcaatgaagtccattatc
agcttgctcttcctcctcttcctcttcatcgttgtctttgccctgctgggcatgcagctc
ttcggaggacagtttaattttgaagaggagacgccgacgaccaacttcgacactttcccg
gcggccattctcactgtcttccagattttgactggcgaggattggaatgcagtgatgtat
catggtattgagtcccaggggggcgtacggcgggggatgttctcctcggtctacttcatc
gtcctcacgctctttggaaactacacgctcctgaatgtcttcttagctatcgccgtcgac
aacctcgccaatgcacaggagctcaccaaggatgaggagaagcaggaggaagaagccaat
aagaagctggccctgcagaaggccatggaggtgaaggaggtcagccccatgtcagcagcc
aacatctctatcgctgcttttgtaaagcaaaatcgagatgcactctctcgcagctcgtcc
gtctccagcgtgcattcacctaaggagcagcagagagccaataagataatgtccgtgtgg
gagcagcgcaccaaccaactgcgtcgaaacaacctgagagccagctctgaggctctgttc
aacgagctggaccccgaggagcgtctgcgggtctcctccgccctccacctgcgctctgac
atgaagacccacaacgaccgccccctagtggtggagccaggtaacggggacaatccccga
ccccccgaggaggacagagacggagcagacccccagcaagagggaggagacccccacggt
ccacagccacgtaagcactatcgccaccgggagaggaacggggagaatggggagagcagg
catcatacccaccacagccgcagtagggaccactaccacccagacgggccccgatccaaa
gagggcaaggtggagaggaaccatagtcgagagggggggcagggccacaggtaccatcac
caggctgaatccccagaggagggggttaacggagggggagagggaagggaagaccgccac
caccactccgacagacaggggaacggggccctggctaccagggacagactggagagcagg
ggccggggccacagggaggagaacggagaaaggaggaagcaccgctcacgcagagtcagg
gcccagtcaacactggatggagacgagtgtagagagaatgaagagagaaatggagacagg
gaccaaggacacagggacaggcagactgactctcaaggggagagcttggccaccagtcct
gtgcagcctcctgcaggtctgcaggctggagagaagcaagaggatgctgacaaccagaag
aacagccacagagccagccaggcaggcctgaacagcaacactgtccacatccctgtcacc
atcactgccccatccagagagaccaccatcatacccatggataacacagactgtgagagc
ctccgcctgaacgaggagaagaaggacttggaggaggagctgaagaacggtcccaaacac
attctcccctacagctccatgtttgtgtttggacagaccaaccctgtgcgtcggctgtgc
cactacgtggtgaacctgcgttactttgagatgtgtatcctgtcggtcatcaccatgagc
agcatagccctggctgctgaagaccctgtgcaggccaatgcaccacgcaacaacgtgctc
aagtatctggactacgtcttcacgggagtgttcacctttgagatggtgattaagatgata
gacctgggactgctccttcatcctggttcttacttccgggacctgtggaacatcctggac
tttattgtggtcagtggagctctggtggcgttcgcctgctcaggaactaaaggcaaggac
atcaacacaatcaagtctctcagggtgctgcgagttctaaggcctctgaagaccatcaaa
cgactgccaaaactcaaggccgtgtttgactgtgtggtcaactctctgaagaacgtgctc
aacatcctcattgtctacatgctcttcatgttcatcttcgctgtgatcgctgtgcagctg
ttcaagggcaaattcttctactgcaccgacgagtctaaaggtctggagaaggactgcagg
ggtaagtttctggactatgacggtgatgaagtggcggcccaggatcgtgagtggaggaag
tatgagttccattacgacaatgtgctgtgggccttcctcaccctattcaccgtctccacc
ggggagggctggccaatggtcctaaagcattctgtggatgccacctatgaggatgagggt
cccagcccaggcttccgtatggagacctctatcttctatgtggtctactttgtggtcttt
cccttcttctttgtcaacatctttgtggctttgatcatcatcaccttccaggagcaggga
gacaaggccatgtcagagtgtagtctggagaagaacgagagagcttgtatcgactttgcc
atcaacgctaagcctctgacgcgctacatgccagcagacaagcagtcgttccagtataag
atgtggcagtttgtggtgtcgccgccctttgagtactccatcatgaccatgatcgcactc
aacactgtggtgctgatgatgaagtttcacggtgctccggagatgtatgaggccatgctg
aagcacctgaacattgtgttcacagctctcttcacactagagtgcatcctcaagatcatc
gctttcggaccactgaattacttgaaggcagcttggaacgtgtttgactttgtgacagta
ttggggagtatcacagacatcttggtcacagagattaagacggacaagctgatcaatctg
agtttcttgaggctgttcagggcggccaggctcatcaagctgctgaggcagggctacacc
attcgcatcctgctatggacctttgtccagtccttcaaggccctaccttacgtctgcctc
ctcatcgctatgctcttcttcatctacgccatcatcggcatgcaggtgtttggaaacatt
gagctgaatgaggaatcagccatcaatcaccacaacaacttccagaccttcttccaggct
ctgatgcttctgttcaggagtgcaacaggtgaggcgtggcatgagatcatgctgtcgtgt
ctgagtaaccgtccgtgtgataggctgtcagggtccggagggaaggagtgcggcagtgac
tttgcttatttctactttgtctccttcatcttcctctgctccttcctgatgctcaatctg
tttgtggcggtcatcatggacaactttgagtacctgaccagagacgcctctatcctgggg
cctcaccacctggacgaattcgtccgtgtttgggccgagtacgaccctgctgcctgtggc
cgtatgacctacctcgatatgtacgacatgttccgtcacatgtcccctccactaggtttg
ggaaagaaatgcccgcccagaatcgcctacaagcgattggttaagatgaacatgcccatt
gccgatgacaacacggtgcacttcacgtccacactgatggcgctcatccgcactgctctg
gagatcaaactggcgtctggagtcctggcccagcgtctgtgtgacgctgacctgaggaaa
gagatctccagagtctggcccaacctgcctccgaacactatcgacctgctggtcacacca
tataaaaatgatgagttcaatgagcttctttgcccctttgcggttgtaaaccgagagctg
acagtggggaaggtctacgctgccctcatgatctttgactactacaagcagaaccgggcc
aagagactggaacagcaactgggactggacttcacagggacaattaagaataaaaagggc
ccagccttcttctgccccatgcctatgacccatatgcaggaggaggggacaacagtctcc
agagccaatcccctgccatcctcccaacctgaaccagagtctcagccagagcccacgcca
tccaccaccactctaaccaatggggaagcagtaccaagtactataagtcccataaaagag
tcaggagagcaactgtctcaggagggccaacggtccagcagtagaaaaaggattctacag
aggggccagtcagaggacgtgccctactccaacaaacctcaggaatcagtggagatgagg
caggtggagaacggtgctgatatagggggctactctggtctggatggccatggcagagca
gcctccatgccaagactggactcccagtacaatcggaaccaccctcgtcacctacctggg
acctacctggcacctattgctgacatcagtcctatcaggcggtcggcgtccacgttggct
tcccagtgccaccgggagaagagtctgagagactacaccctggagcggcccagccaggcc
caagcccaggcctcctcagccccaggtcaagcccaggacaggccccaccaccatcaccac
caccgctgtcacagacgcagggacaaggacagggacaagaagcagaagtcgcttgacagg
gcaaccagcgttcagccttctagtacagcatgtgagaggggttcgtctgttgaccccctt
gtggagggcttgaccagggagcgggcgagggagcgtgaccgcggccggcctcatgagaag
aggcaccactctgcagccggggagacgaagcgttactactcctgtgagcgctacgtagcc
agggagcactgccacaccaagtcagctggccccagccgctccacctcccctggagagacc
cacgacctaggcctcttgaagcagagtatcaggatgagtaaaggcagccaagtggtccta
acctttggatctagcccatcctgccgtgggcgcagacagcttccccagaccccactgacc
ccccgccccgccgtggcctacaagactggaaactccttgcccatgcagtttggttccaca
gggcaccagtcctttctcagtcgtggactctcggagcgtaacgctctgctggagtcaccc
cccatacccgtcaccctcattggcttagacccaaacctgagcccctgtccgcggaacgct
ccaccatgcagactccctgaggagcctgatgacttccaggatgctgtgagcaaccatgga
gggagccactcccctaggatcattgcctcagcctcccatggggctgccgggccctcttct
gcacctgccccacagggccgggttgggatcccaaacgggtaccacttcactcttggggtc
aatgccgtttcaagctccagccccagagggactgggagttttcgtgagaaggaagaggat
gactggtgctag
DBGET
integrated database retrieval system
