KEGG   Oncorhynchus gorbuscha (pink salmon): 124049110
Entry
124049110         CDS       T07892                                 
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137  Mitophagy - animal
ogo04140  Autophagy - animal
ogo04144  Endocytosis
ogo04145  Phagosome
ogo04148  Efferocytosis
ogo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124049110
   04145 Phagosome
    124049110
   04140 Autophagy - animal
    124049110
   04137 Mitophagy - animal
    124049110
   04148 Efferocytosis
    124049110
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124049110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124049110
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124049110
   04031 GTP-binding proteins [BR:ogo04031]
    124049110
Membrane trafficking [BR:ogo04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    124049110
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124049110
  Exosomal proteins of other body fluids (saliva and urine)
   124049110
  Exosomal proteins of colorectal cancer cells
   124049110
  Exosomal proteins of bladder cancer cells
   124049110
GTP-binding proteins [BR:ogo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    124049110
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase Gtr1_RagA cobW ATP_bind_1 nSTAND3 PduV-EutP AAA_16 NTPase_1 Septin AAA_22 AAA_24 AAA_7 DUF5992 AAA_5 ATPase_2 SRPRB NACHT ABC_tran NB-ARC
Other DBs
NCBI-GeneID: 124049110
NCBI-ProteinID: XP_046226418
LinkDB
Position
LG11:complement(64225418..64229710)
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKNNIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRSSSSSDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacatctctgatgaaccagtatgtaaataagaggttcagtaaccaatacaaggccact
ataggagctgacttcctcaccaaggaggtgatggtggatgacaggctggtcaccatgcag
atctgggacacggctgggcaggagcggtttcaatctctgggtgtggcgttctaccgtggg
gctgactgctgtgtgctggtctatgatgtcacggcgcccaacacctttaagactctggac
agttggagggatgagttcctgatccaggccagccccagagacccagataacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacaacaaagcgtgcccag
gcctggtgtgccagtaagaacaacatcccctactttgagaccagtgccaaggaggccatc
aacgtagatcaagcattccagaccatcgcccgcaacgccctcaaacaggagtctgaggtg
gagacgtatgactttccagaccagatcaaactgagagacgaccggtcctcctcctccagc
gacggctgttcctgctga

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