Oncorhynchus gorbuscha (pink salmon): 124049134
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Entry
124049134 CDS
T07892
Name
(RefSeq) synaptobrevin homolog YKT6-like
KO
K08516
synaptobrevin homolog YKT6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04130
SNARE interactions in vesicular transport
ogo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124049134
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124049134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124049134
Membrane trafficking [BR:
ogo04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
124049134
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
MA3
Motif
Other DBs
NCBI-GeneID:
124049134
NCBI-ProteinID:
XP_046226453
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All DBs
Position
LG11:complement(65248029..65261361)
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AA seq
198 aa
AA seq
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MKLFSLSVLYKGTTKSNLLKAAFDLSSFSFFQKSSVQEFMTFTSDLIVQRSSIGSRASVK
EQEYLCHVYVRNDSLGAVVIADGEYPSRVCFTLLDKVLEEFSRQVSSIDWPSGSPDTVHY
TALDSYLAKYQNPREADAMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttcagtctgagtgtgctgtataaagggaccaccaagtctaacctactgaaa
gctgccttcgacctgtcatccttcagcttcttccagaagtccagtgttcaggagttcatg
acattcaccagtgacctcatagttcaacgctcgtctatagggagccgagcctctgtcaaa
gaacaagaatacctgtgtcacgtgtatgtaaggaacgactccctgggtgcggtggtgatt
gctgacggagagtatccctctagagtgtgcttcaccctcctggataaggtgctggaggaa
ttttccagacaggtgagcagtatagactggccctctggttctcctgacactgtccactat
actgccctggacagctacctcgccaagtaccagaatcctcgggaggcggacgcaatgagt
aaagtacaagctgagctggacgaaaccaaaataattctgcacaacactatggaaagtctg
ttggagagaggagagaagctggatgatctagtccagaagtccgaacacctggggaaccag
tctaaagccttctacaagacggcgcggaagcagaactcttgctgtgaggtcatgtga
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