Opisthocomus hoazin (hoatzin): 104326318
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Entry
104326318 CDS
T08436
Symbol
SRRM1
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03013
Nucleocytoplasmic transport
oha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104326318 (SRRM1)
03015 mRNA surveillance pathway
104326318 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104326318 (SRRM1)
03041 Spliceosome [BR:
oha03041
]
104326318 (SRRM1)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104326318 (SRRM1)
Spliceosome [BR:
oha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104326318 (SRRM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
104326318
NCBI-ProteinID:
XP_009929393
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MTGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDD
VVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLE
LKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRS
SPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATPNSDIPKA
PKPEPPVPETKENSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPRRRHRS
RSRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRS
PPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRARKSRG
SISPSRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQYRRQNQ
QSSSDSGSSSSTEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRRRRRSPS
PPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKR
RTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPSRSNRE
TRSPPQNKRHSPSPRPRASHTSASPPPPRRGASASPQRRQSPSPSTRPIRRVSRTPEPKK
TKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPTRSCSPSANWSPAKKAKSPTQSP
SPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKQEEAPGASTSXAAVAAADTTSAQEDQ
EAEAEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaacaagtgcagaacaggacaatcgcttcagcaacaagcagaagaagctgttg
aagcagttgaaatttgcagaatgcttagaaaagaaggtggacatgagcaaagtaaatctg
gaagtaatcaaaccatggataacaaaacgagtaacagaaatccttggatttgaagatgat
gtagtaattgaatttatattcaaccagttggaagtgaagaatccagattccaaaatgatg
caaatcaacctgactggttttttgaatgggaaaaatgctagggagttcatgggagaactg
tggccactgctgttaagtgcacaagaaaacattgctggtattccaactgcatttctggaa
ctgaagaaggaagaaataaaacagcgacagatagagcaagagaaactggcttctatgaag
aaacaagatgaagacaaggagaagagggataaggaagacaaagacaacagagaaaaaaga
gacagatccaggagtccgagaagacgcaaatcacgatctccgtcccctcgaaggaggtcg
tcacctgtcagaagagagcggaaacgcagccattctcgctcccctcatcacagaaccaag
agccgtagtgctactcctgcaccggaaaagaaagaggcaactcctgagccagaaccctct
gtgaaaccaaaggagactgttgttcaagaggcaactccaaacagtgatatcccaaaagct
cctaaacctgaacctcctgtaccagagactaaggaaaattcaccagaacgtaattcaaag
aaggagagagagaaggaaaaagagaagactcgtcaaagatccccaacacggtccaagtca
aggtcaagatctcgatcgcgttctccatctcattctcgaccaagaaggcgtcataggtca
cggtcaagaaggcgaccaagcccaagacgacggccatctccaaggagaaggacccctcca
cggcgaatgcctcccccacccagacacagaagaagcagatcccctgtgaggcggagaaga
cggtcatcagcatccttatctggcagtagctcttcctcttcctcctcacgttcccgatca
ccaccaaagaaaccacctaaaagaactgtatccagtcctcctcgtaaaacacgtaggctg
tctccttcagcaagccctccgaggcggaggcacagaccatccccaccagcaagtccacct
ccaaaaccacgtaggtcgccaacaccccagcagtcgaatcgtgcaagaaaaagccgtggc
tccatttcgcctagcagagcatcagcacccaaacataagagtactgaaaaaagagaatct
ccttcgccagcacccaaaccaaggaaagcagaactgtctgaatcagaagaagataaagga
ggtaaaatggctgcagcagactctgttcaacagaggcgtcagtacagaaggcaaaatcaa
cagtcttcatctgattctggttcttcgtcttcaactgaagaggaaagacctaaaagatcc
aatgtgaagaatggggaagttggtagacgccgacgccattcgcattcacgcagtccatcg
ccgtctccgcgaaaacgacagaaggaatcctctcctcgtaggaggaggagaagtccatcg
ccccccccagccaggcggcgacgctccccttcacctgcccctcctcctaggcggcggcgg
tcgccttcattacctcgtcgaaggtctccatcaccacctccacgcagacgttcgccttct
ccgcgaagatactccccaccgatacagagacgctactctccttctccaccaccgaagaga
agaacggcttctcctcctcccccacctaaacgaagggcatcaccttctccacagtcaaaa
cgcagagtctcccattcaccaccaccaaaacaaaggagctcgccagccgctaaaaggcgt
tcaccttcgatatcttccaagcacaggaagggatctcctcccagtaggtccaatcgggaa
acacgttctccaccacaaaacaaaaggcattcaccttcaccacggcctagagcttctcat
acctccgcaagcccaccaccaccacgacggggagcttcagcttcaccccagagaagacag
tctccatctccaagcactagacccatcaggagggtgtcaagaacaccagaacctaagaag
acaaaggcttccacaccaagtccgcgatctgcgaggcgggtgtcctcatcacgatctgca
tcaggatcacctgagccagcaccgaaaaaacatcaaggacccccatctcctactcggtct
tgttctccttctgcaaactggtcacctgcaaaaaaggctaaaagcccaactcagagccca
tcgcctgcacggaattcagatcaagaagggggtggaaagaagaagaagaaaaagaaggat
aagaagcataaaaaggataaaaagcacaagaaacacaaaaaacaagaagaggcccccggc
gcctccaccagcnncgctgctgtggctgcggccgataccacctcagcacaggaagaccag
gaagcagaggcagaacccaaaaaggagacggaaagtgaaccagaagacaacctggatgat
ctagaaaaacacctgcgagagaaggcactgaggtcaatgaggaaggcgcaagtgtcccca
ccatcctag
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integrated database retrieval system
