Opisthocomus hoazin (hoatzin): 104326333
Help
Entry
104326333 CDS
T08436
Symbol
PRPF38B
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104326333 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oha03041
]
104326333 (PRPF38B)
Spliceosome [BR:
oha03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104326333 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
104326333 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104326333
NCBI-ProteinID:
XP_009929409
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MYANKQRFYVGKTGAAPPQAGAERGWSDSVRAGLLLGACGKGVTFHSLLGLYVCAAQHQP
GAVPPAQQQLQSAAPKPAASGKQGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELK
TYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKL
TRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFEAFLDDEEDLDVKAGGGCIMTI
GEMLRSFLTKLEWFSTLFPRIPVPVQKTIDQQIKSRPRKIKKDGKEGMEEIDRHAERRRS
RSPRRSVSPRRSPRRSRSRSHHREGHGSSSFDRELERERERQRLEREAKEREKERRRSRS
TDRTLERRRSRSRERYRSRSRSRDRKGDRRDRDREREKENERSRKKERDYDKERGSEREK
DRSFFXIEERRHKDDKDDKKHRDDRRDSKKERKHSRSRSRERKHRSRSRSKNTGRRSRSR
SKEKSSKHKNESKEKSNKRSRSRSRGRTGSIEKSRKRDQSPSKEKSRKRSRSKERSHKHD
HSDSKDHSDKHDRRRSQSTERESQEKQHKNKDETV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaaataagcaacgattttatgtggggaaaaccggcgcggcgccgcctcaggcg
ggagctgaaaggggctggtccgactccgtgcgggcaggccttcttctgggcgcctgcggg
aagggggttacctttcactctctgctgggcctgtacgtgtgcgcggcccagcaccagcct
ggcgccgtcccgccggcccagcagcagctgcaaagcgcagcccccaagccggcagcctca
ggcaagcagggcaacgtgctgccgctgtgggggaatgagaagaccatgaacctgaacccc
atgatcctcaccaacatcctgtcgtcgccctacttcaaggtgcagctctatgagctcaag
acttaccatgaagtggtggacgagatctacttcaaggttacgcacgttgaaccatgggag
aaggggagcagaaaaacggcaggccagacagggatgtgtggaggggtgcggggtgttgga
actggaggaattgtgtctactgccttttgtctgctctacaaattatttacactgaaactc
actcgtaagcaagtgatgggccttataactcatactgactctccatatattagggctctt
ggatttatgtatattaggtacacacaaccaccaacagatctgtgggactggtttgaagcc
tttcttgatgatgaagaggacctggatgtgaaggcaggtgggggttgcattatgaccatt
ggggagatgcttcgttccttcctcactaagcttgaatggttttccacgttgtttccaaga
atccctgtgccagtccagaaaactattgaccagcaaattaaaagcagacctagaaaaatc
aagaaagatggcaaggaggggatggaagaaatagaccggcatgcagaacgtagacgttca
aggtccccaagaagatccgtcagtcccaggaggtctcccagaagatccagaagcagaagt
catcatcgggaaggccatggatcatctagttttgatagagagctagaaagagaaagagaa
cggcagagattagaacgtgaagctaaggagagagaaaaagaaaggcggaggtctcgaagt
actgatcgcacactagaacggaggcgaagcagaagccgggagagatacagaagccgcagt
cgaagtcgtgacaggaaaggagatagaagagacagggatagggagcgagagaaagaaaat
gaacggagccggaaaaaagagagagattatgataaggaaagaggtagtgagagggaaaaa
gatcgatcttttttttagatagaagagagaagacacaaggatgacaaggatgacaagaag
caccgggatgacaggcgggattctaaaaaagagagaaaacatagtagaagtcgaagccga
gaaagaaagcataggagtaggagccgaagtaagaatacaggtaggcgcagcagaagcagg
agcaaagagaagtcaagtaaacataaaaatgaaagtaaagagaagtcaaataaacgaagt
agaagccgaagcagaggaagaacaggtagtattgagaagtccagaaaacgagaccagagt
cccagcaaagagaaatcgcgcaagcgtagcagaagcaaagaacgttcccacaaacatgat
cacagtgatagcaaggaccattcggacaaacatgaccgtcgaaggagccaaagtacagaa
cgagagagccaagaaaagcaacataaaaacaaagatgagactgtgtga
DBGET
integrated database retrieval system
