Opisthocomus hoazin (hoatzin): 104326486
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Entry
104326486 CDS
T08436
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oha03021
]
104326486 (CTR9)
Transcription machinery [BR:
oha03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104326486 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_6
TPR_11
TPR_7
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
104326486
NCBI-ProteinID:
XP_009929577
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MRVPKSAYRHRTYCGRQTQTKIDNSSGNIFAGTLKFCIAKTISPYKLDSSSSVFRERVPA
LVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVKLLEAARIDGNLD
YRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMADKIIMYDQNHLLGR
ACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRTNP
GCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEADSIKNG
VQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTEVEAMQAESCYQLAR
SFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNN
YETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAY
GTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNA
ISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWF
KEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQNDTYSMLALGNVWLQT
LHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHKGYFREARDVFAQVR
EATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQ
ECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFS
YLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQ
KLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKEKKRGGGGGRRSKKG
AGEFDEFVNDDSDEDLPVSRKKKKRKGSGSEQDGEEEEGERKKKKRRRPQKADEGSDDEE
HENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDSSDEDKLKIADDGHA
RNSISDSDDGERQHSKRIVSDSDSDNRNKSGSEAGSPRRSSVHPSEEDSDSDRSARKRRR
SDSEQSDNESVQSGRSHSGGSENESHPASHSADSDRDSERGSDNEGSGRGSGNESEPEAS
NDERSEGGSDDSD
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttcctaaatcagcatatagacacaggacttactgtgggagacaaactcaaact
aaaattgacaatagtagcggaaatatttttgctggtactctgaagttttgcatagccaaa
actataagcccttataaactggattcctctagttcagtcttcagagaaagagttcctgca
ttggttatcgagcttgactttgatcagttacctgagggtgatgaagttatcagtatactg
aaacaggaacatactcaactgcacatatggattgccttagcgctggaatactacaaacaa
gggaaaacagaagactttgtcaagcttttggaagctgcacgcatagatggtaacttggac
tatagagaccatgaaaaagatcagatgacgtgtctggatacactggcagcatactatgta
cagcaggctcgaaaggagaagaacaaagataacaagaaggagctcattacgcaagctacc
ttgttgtatactatggctgacaaaattatcatgtatgatcagaatcacttgttgggaaga
gcctgcttttgtctgcttgaaggtgataagatggaccaagctgatgcacaattccacttt
gtgctcaaccagtccccaaataatattcctgcccttcttggtaaagcatgcatttctttc
aataagaaagattatagaggagcccttgcctactacaagaaagcattgcgtaccaatcca
ggttgcccagctgaggttcgattaggtatgggccactgcttcgtgaaactgaacaagttg
gaaaaagctcgcttagcattcagcagggctctggagctaaattcaaaatgtgtaggggct
ttggttggactggctgttctggaactcaataataaagaggctgattccatcaagaatggt
gttcaactcctctctagggcttacacaattgatcccagtaatccgatggtgttgaatcac
ttggctaatcacttcttcttcaagaaggactacggtaaagtacaacacttggctcttcat
gctttccataatacagaagttgaagcaatgcaggcagagagttgttatcagctggctagg
tcttttcatgtacaggaagattatgatcaagctttccagtattattaccaggccactcag
tttgcctcatcttcttttgtacttccattttttggactgggtcaaatgtacatttatcga
ggggacaaagagaatgcatcacaatgctttgagaaggttttgaaagcctatcctaacaat
tatgagactatgaaaatccttggatctctttatgcagcttcagaagaccaggagaaacgg
gatattgcgaagggacatctaaagaaagtaacagaacaatatcctgatgatgtagaggca
tggattgagctagctcaaattctagaacagactgatatacagggtgcactgtcagcctat
ggtacagccacacgcattctgcaagagaaagtacaggctgatgtcccaccagagattttg
aataatgtgggtgctctgcacttcaggctgggaaacctaggagaagcgaagaaatatttt
ttggcatcactggatcgtgcaaaagcagaagctgaacatgatgagcattattacaatgct
atctctgtaacaacgtcctataaccttgccagactatatgaggcgatgtgtgaatttcat
gaagcggaaaagctgtataaaaacattttaagagaacatcctaattacgttgattgctac
ttacgtttgggagctatggctagggataaaggaaatttttatgaggcttctgattggttt
aaagaagcacttcagataaatcaggaccatccagatgcttggtctctgattggcaatctt
catttggctaaacaagagtggggtccaggacagaagaaatttgaaaggatattgaaacag
ccctccacacaaaatgatacgtattccatgctggctcttggcaacgtctggctgcagact
ctacatcaacccacaagagacagagaaaaagagaagcgtcatcaagaccgtgcactagca
atctacaagcaagtactcagaaatgatccaaagaatttgtatgctgctaatggcatagga
gctgtcttggcgcataaaggatatttccgtgaagctcgtgatgtttttgcccaagtgaga
gaggcaacagcagatatcagtgatgtgtggctgaatttggcacatatctacgtagaacag
aaacagtacatcagtgctgtgcagatgtatgaaaactgcctcagaaagttctataagcat
caaaatactgaggtattgttatatttggcccgggcactcttcaaatgtggcaaattacag
gaatgcaaacaaactttgttaaaggccaggcatgtagcgccaagtgatacagtccttatg
tttaacgtggctttagtgcttcagagactagctacctctgtcctgaaagatgaaaaaagc
aatctaaaggaggtgcttaatgctgtgaaagaactggagctagcccacaggtacttcagt
tacttgagtaaagtaggtgataagatgagatttgacttggcacttgctgctacagaagcc
aggcagtgctctgacttactgagtcaagcccagtatcatgtggctcgggcacgcaagcag
gatgaggaagagagggagctacgtgcgaagcaagagcaggaaaaggagctgcttcgccaa
aaactacttaaagaacaggaagagaagcgcctaagagaaaaagaagaacagaagaaactt
ctggaacaaagagctcaatatgtggagaaaaccaagaatattctgatgttcactggtgaa
gtagaaggatcaaaggagaaaaaacgtggtggtggtggaggcaggcgttccaaaaaagga
gcgggggaatttgatgagttcgtcaatgatgacagtgatgaagatttgcccgtgtctaga
aagaaaaagaagaggaagggcagtggtagcgaacaagatggggaagaagaggagggtgag
agaaagaagaagaagaggaggagaccccagaaggcagatgaggggagtgacgatgaagaa
catgaaaatggtccaagacctaaaaaacgacgtccacccaaagcagagaaaaagaaggct
cccaaaccagaacgtctgcctccttcaatgaaaggaaagatcaaatcaaaagctatcatt
tcatcaagtgatgattcttctgatgaggataaactcaaaattgctgatgatggacatgct
aggaatagcatcagtgattcagatgatggggagcggcagcatagcaaacgcattgtttct
gatagtgattctgataacagaaacaaatctggtagcgaggcagggagtccaaggaggtcc
agcgtccacccatctgaggaagattctgacagtgacagatcggctagaaaaaggaggcgg
tcagattcggagcagtctgacaatgagtctgtacagtcagggagaagtcattccggtggt
tcagaaaacgaatctcacccagcttctcacagtgctgactcggacagagattctgagaga
ggatctgacaatgagggttctggcagaggatctggtaatgaatctgaaccagaagcatcc
aacgatgagaggtctgaaggtggttcagatgacagtgattaa
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