Opisthocomus hoazin (hoatzin): 104326805
Help
Entry
104326805 CDS
T08436
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03015
mRNA surveillance pathway
oha03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104326805 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104326805 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104326805 (CPSF6)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104326805 (CPSF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104326805
NCBI-ProteinID:
XP_009929923
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MDQRTSAEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDSLPPSVGDDVGKGAAPNVV
YTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGS
EASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSS
RAAFPPSNRGRGRFPGAIPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPP
PPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQ
QGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPANSGIPTS
DSRGPPPTDPYGRPPPYDRGDYGPPGRRFTGNNMSIREKLHIPFYGRHTKNNTQNSGREM
DAARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGSAIETLVTAISLIKQSKVSA
DDRCKVLISSLQDCLHGIESKSYGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYR
ERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcgtacatctgcggaagctgaatatggtggacatgatcagattgatttatat
gatgatgtaatttctccgtcggcaaataatggggatgccccagaggatcgtgattacatg
gattctctcccaccatctgttggggatgatgtaggtaaaggagctgcaccaaatgttgtc
tatacgtatactggaaaaagaattgccttgtacattggaaatcttacttggtggacaaca
gatgaagacttaactgaagcagttcattcactgggggtaaatgatattttggagataaaa
ttttttgaaaatcgtgctaatggccagtctaaaggatttgcccttgtgggtgtggggtca
gaagcatcctccaaaaagttgatggatttgttgcctaaaagagaattgcatgggcagaat
cctgttgtgaccccatgtaataaacaatttctgagtcagtttgaaatgcagtcaaggaaa
accacacagtctggccagatgtctggggaaggtaaagctggtcccccaggaggaagctca
cgagcagcatttccgcctagtaacagagggcgaggtcgttttccaggtgccattccaggt
ggagacagattccctggaccagcagggcccggagggccaccaccacctttcccagctgga
caaactcccccgcgtccacctttaggtcctcctggcccaccaggcccaccaggccctcca
cctcctggtcaggtcctcccacctccattagctggacctcctaatcgtggtgaccgtcca
ccaccaccagttctgtttccaggacagccttttggtcagcccccacttgggccacttcct
ccaggccctccaccaccagtgccaggctatgggccaccaccaggtccgccaccacctcag
cagggtccacctccacctccgggtccatttccccctcgtccgcctggccctcttgggccg
cccctgactcttgctcctcctccacatctccctgggccacctccaggtgctccaccacct
gcaccacatgtgaatccagctttcttcccccctcctgctaatagtggcatacctacttca
gacagccgtggcccacctccaacagatccatatgggcgacctccaccttatgacagaggt
gactatgggccacctggaaggcgtttcactggaaataacatgtccataagagaaaaatta
catattccattctatgggaggcacacgaaaaataatactcaaaactcagggagagaaatg
gatgctgcaaggacacctctaagtgaagcagaatttgaagaaatcatgaatagaaatagg
gcgatctcaagcagtgccatttcgagagctgtatcagatgccagtgctggggactatgga
agtgctatagagaccttggtaactgcaatttccttaatcaaacagtccaaagtatctgcg
gatgatcgctgtaaagtactcattagctctcttcaggactgccttcatggaattgagtct
aagtcttacggttctggatccagacgtgagcgatccagagagagggaccacagtaggtca
cgagaaaaaagtaggcgccacaaatcacgtagtagagatcgtcatgatgactactatcgg
gaaagaagccgtgaaagagagagacatcgtgatcgtgacagagatcgcgacagggagcga
gacagagagagagaatatcgtcatcgttaa
DBGET
integrated database retrieval system
