Opisthocomus hoazin (hoatzin): 104326889
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Entry
104326889 CDS
T08436
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03013
Nucleocytoplasmic transport
oha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104326889 (UPF3A)
03015 mRNA surveillance pathway
104326889 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104326889 (UPF3A)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104326889 (UPF3A)
mRNA cycle factors
P-body specific factors
104326889 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
104326889
NCBI-ProteinID:
XP_009930029
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MDGIARTGVATKAAYRDTAHWQECSGGSPGFLKAPLRATRDDGDGAEDGDGGTLDRRPAG
AVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLFR
DRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDTKAGSIEDDPEYRKFLESYCADE
EKICANPEILLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKR
LREEEKRKRREEERRKRKEVEKQRKISEKEIRIKLLKKPEKGDELASEKYKEKDEEADLE
ENKWDKSPGSGSIKSKSLEGSPKELKEKSQNDSDKEQRDLERRFREKEPERQRYRSDDGR
KHRTHYEFDKFVRRNEEELKWGKGYSQDRGKKGNYNYSFTVEAVDKLGKEDKCDDMASKK
ERIRNKDRPAMQLYQPGARIRTHTGSTSKAYDCSGKSFEDALDKKYEADSSAGGGSEKSE
EAE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatagcaagaacgggtgttgctacaaaggcagcgtatcgtgacactgcgcat
tggcaggagtgcagcgggggttctccggggttcctgaaggcgcctctccgcgccaccagg
gacgatggggacggcgccgaggacggagatggcggcaccctcgaccgccgaccggccggg
gcggtagttattcgacggcttcctccttgtctaactaaggagcaactggaggaacagcta
catcctctgcctgcccatgattattttgagttttgcactgctgatcccagcctttatcct
catctctactcaagagcatacataaactttagaaatcctgaggacatccttctttttaga
gatcgctttgatggctatgtcttcattgataataaaggtttggagtatcctgcggtggtt
gaatttgctccattccaaaagatttcaaaaaagaagctgaagaagaaagataccaaagct
gggagcattgaagacgatccagaatataggaaatttttagagagttattgtgctgatgaa
gagaaaatctgtgccaatcctgagattcttttgggagagattgaggccaaaacaagggaa
ctcattgctagaagaacaacaccccttttggaatatattaaaaatagaaaattagaaaag
cagagaatacgagaagagaaaagagaagaacgaaggcggagagaattggagaagaaacgt
ctgcgggaggaagagaaaaggaagcgcagagaagaagaaagacgtaaaagaaaagaagtg
gagaaacaaaggaagatttctgaaaaagaaataaggatcaagcttcttaagaagcctgaa
aaaggagatgagctggccagtgaaaagtacaaagaaaaagatgaagaagctgaccttgag
gaaaacaaatgggataaatcacctggatctgggagtataaaatccaaatcattggaaggt
tcaccaaaagaacttaaggaaaagtcacaaaatgatagtgacaaagagcaacgagatttg
gagagaagatttcgagaaaaagaacctgaaagacaaaggtatcgatcggatgatggcaga
aagcatagaactcactatgagtttgacaagtttgtgagaaggaatgaagaagagctgaaa
tgggggaaaggatacagccaagacagaggaaagaaagggaactacaactacagcttcact
gtggaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaaaag
gagcgcataagaaataaggatcgcccagccatgcagttataccagccaggagctcgcatt
cggacccatacgggatcgaccagtaaagcctatgactgcagtgggaaatcctttgaagat
gctcttgataaaaagtacgaggcagatagttcagctggaggtggttctgagaagagcgaa
gaagcagaataa
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integrated database retrieval system
