Opisthocomus hoazin (hoatzin): 104327103
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Entry
104327103 CDS
T08436
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104327103 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104327103 (HBS1L)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104327103 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GIP1_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
104327103
NCBI-ProteinID:
XP_009930283
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MELGDSVFISTWSKNFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDTPATFAEPLEEEYV
CEGTDDTADCFTSSHQLTEVDRARLNSCLDQMREVLAESVPEQTMVQAVLDSKFDVQKAL
DLVLSQGSKQNVKTKNEDAVIVGKTTKGDLLCCPEMCVDTDRFSCAVENVADNTNKPGFG
NLTAKSDSACYSLIINDKMLLNTEKSRKTRDSQSARMESELVPKVTKMTVSGKKQSMGFE
VPCVIAEENGHPNTPQKGLLTEDAGVVSGVLEAVSKSALSPQVVQVSEEQNMVPTPIKKS
SKTKPHIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQE
SKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITG
AAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERF
QEITSKLGQFLKQAGFKESDVGYVPTSGLGGENLVTRSQSSDLTQWYKGKCLLEQIDSFK
PPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLHD
EPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKGF
PVLLHYQTVSEPATIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYKD
FKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggaactgggagacagtgtgttcatttcaacatggtcaaaaaattttgaagatgatgat
gtgtacggccaatcagtagaagatgattattgcatttctccttcaacagcagctcaattt
atctactctagacgagacacaccggcaacatttgctgagccgttagaggaagaatatgtc
tgtgaaggtacagatgatactgctgattgttttacatccagtcatcagctgactgaagtt
gacagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtctgta
ccagagcaaacaatggtgcaagcagtactggatagtaaatttgatgtacagaaggctttg
gatcttgtgctttcacaaggcagtaagcaaaatgtgaagaccaagaatgaggatgctgtg
attgtaggaaagacgacgaaaggagacttactttgttgtccagaaatgtgcgttgataca
gaccgtttctcttgtgcagtagaaaatgttgctgacaacaccaacaaacctgggtttgga
aacttgacagccaaaagtgattcagcttgttactctttaattataaatgacaaaatgctc
cttaatacagaaaaatccagaaaaacgagggattcccagtcagccagaatggaatctgaa
cttgtgccaaaagttaccaaaatgacagtgtctggaaagaaacagtctatgggatttgaa
gttccatgtgtgattgctgaagaaaatggccatccgaacacacctcagaaaggactgtta
actgaagatgccggtgtcgtttctggggtgcttgaggcagtctcaaaatctgctctttca
ccccaagtagtgcaggtttcagaagagcagaatatggtgcctactccaataaaaaagtca
agtaagacaaaaccacacatagatgtgaaagcagagttggagaagcgacaaggaggaaag
cagctgcttaacttggtggtgataggacatgtagatgcaggtaaaagtactttaatggga
catctgctctaccttttgggaaatgtgaacaaaagaactatgcacaaatacgaacaggaa
tctaagaaggctggcaaagcttcgtttgcctatgcatgggtcttggatgaaactggtgaa
gaaagagaaaggggagtcacgatggatgtaggcatgaccaaattcgagacaaagactaaa
gtaattacactgatggatgctccaggccacaaagacttcattccaaatatgatcacagga
gctgcacaggctgatgtggctattttggttgttgatgccagcagaggagagtttgaagca
gggtttgagacgggtggacaaactcgagaacatggtttattagtgcgctctcttggagtg
acacagttagctgttgcagtcaataaaatggaccaggtcaattggcaacaggaaagattt
caggaaattacgagtaagcttggccaatttcttaaacaagctggctttaaggaatcagat
gtgggttacgtcccaacgagtggccttggtggtgaaaatctggtcacaaggagtcagtcg
agtgacctcacacagtggtataaaggaaagtgtttgttagagcaaatcgattctttcaag
ccaccacagagatcagtggataaaccatttaggttgtgtgttgctgatgtttttaaagac
caaggatcaggattttgtgtgactggtaaaatagaagcaggctatattcaagttggagaa
cgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacactgcatgat
gaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatggat
atcatcaaaatcaatgttggctgtgtgttttgtgatcccaaggaacccattaaagtttgc
actcgtttcagagctcgggttctcatcttcaatattgaggttccaatcactaaagggttt
cctgtacttttacactatcaaactgtaagtgaacctgctactattagaagactgttgagt
gtcctgcacaaaagtactggtgaagtgacaaagaaaaaaccgaagttcttaactaaagga
cagaacgcgctaatagaactacaaactcaaagacctgttgctctagagttgtataaagat
tttaaagagcttgggaggtttatgttacgctacagtggttccactattgctgcaggagtt
gtcacagagattaaggaatga
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