Opisthocomus hoazin (hoatzin): 104327431
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Entry
104327431 CDS
T08436
Symbol
POLE
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03030
DNA replication
oha03410
Base excision repair
oha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104327431 (POLE)
03410 Base excision repair
104327431 (POLE)
03420 Nucleotide excision repair
104327431 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oha03032
]
104327431 (POLE)
03400 DNA repair and recombination proteins [BR:
oha03400
]
104327431 (POLE)
Enzymes [BR:
oha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104327431 (POLE)
DNA replication proteins [BR:
oha03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
104327431 (POLE)
DNA repair and recombination proteins [BR:
oha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
104327431 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
DNA_pol_B
zf-DPOE
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
104327431
NCBI-ProteinID:
XP_009930633
LinkDB
All DBs
Position
Unknown
AA seq
2126 aa
AA seq
DB search
MASARTGSGDGHSGQVALPYKPYFYIATQKGCELEVSSFLAKKFQGKIAKLETVPKEDLD
LPNHLVGLKRNYIKLSFNTVDDLVKVRKEISPAVRKNRERDQASDVYTAMLSSALSGGSL
STEEEGSSRKVANQMDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYWGSTYPPEITRR
DDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDF
EFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEARAAAHG
VNMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELD
PEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTL
CEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRF
KMNPAAFDFLVQRVEKTLRHAIEEEEGLPLDQVTNFQEVCDEIKVKLNSLKDVPNRIECP
LIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEFMPASR
SEYHRIQQQLESEKFPPLSAEGPPRAFHELSREEQAKYEKKRLADYCRKAYKKIHITKVE
ERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVETGDASEVKRCKNMEIL
YDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGASIITQARELIEQIGRPLELD
TDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELQDPASLT
YVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQ
LVKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSKAANMPDSELFELISENRSMS
RKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQ
AEPSVRKHYLRKWLKSPSLQDFNIRAILDWDYYIERLGSTIQKIITIPAALQQVKNPVPR
VRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVLSNQPPEGMPSSQIGDIEDFGAAKT
LRPSLPVANKRKRVPAAEESQQMSQYLELSQSWREILGPPPPLGTTKEERLVWLPYHQRK
WELQARQRRERRKRRRLEDGGVAAGGGVVRDALSKGLSSYLRKTARSILDLPWQIVQIAE
TSQPGLFRLWAVIGSDLHCMRLSIPRVFYVNQRVPKPEEGAAYRRVNRILPRSNLVYNLY
EYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALIHLGCVCVVSRQLVRHLAGR
EAETFDIEQLEMRSLAQFTYLEPGILSHTEGRAPWNCAAWGPSPPALTQSPLGTVRSNQM
PNLTTLFSAERSALLEKAGEELLPPDKHTFEVRAETDPKAVYRAVQRLLLGYKRLPHPLM
GQAGFPVFSAAVLTPTPFTSLCPRYYHIPIGNLPDDISTFGSDLFFSRHLRRHNHLLWLS
LTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLELDIQSLAVNTVLQSHHIND
MEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCSNTFRILKSMVVSWVKEIT
QYHNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYAN
FNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFLLWMDPANYGGIKG
KVDSRIHYREKDTSKRHVLEEEDSEEEEEEAAGEDEEGEGEPNMEELLENSWNIAQFLPQ
AASCQSYFLMIVSAYVVAVYHSMKEELRRNAPGSTPVKRRSTSQVSQEVLGETGAMPGMI
TFSQDYVANELTQSFFTITQKIQKKMAGSRNATEPSDMFPVLPGSYLPLNNPALEFIKYV
CKVLSLDTNITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSYMLPEVICRNCNFCRDLD
LCKDPALSQDGSVLPSWVCSNCQAQYDPDAIETALVEALQKKLMAFVLQDLVCKKCHGVK
ETHMPVYCSCAGDFTLTISSQDDDKV
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggccaggactggcagcggggacgggcacagcgggcaagtggccctgccctac
aagccctacttctacattgccacccagaagggctgcgagctagaagtgtcgtccttcctc
gccaagaagttccaaggcaagattgcaaagctggaaactgtccctaaagaagacttggac
ctgccaaaccacttggtgggcctgaagaggaactacatcaagctgtccttcaacacagtg
gatgacctggtgaaggtgcggaaggagatctctcctgctgtgaggaaaaacagagagcga
gaccaggcgagcgatgtctacacggccatgctgtcaagtgctctgagcggaggcagcctg
agcacggaagaggaggggtcttccagaaaggttgccaaccagatggacaacattgtggat
atgcgggagtacgacgtaccctaccacgttcgcctctccattgacctgaagatccacgtg
gctcactggtacaacgtgcgatactggggcagcacctacccccctgaaatcacccgccga
gacgacctcgtggagcgaccggatcctgttgttctcgcctttgacattgaaactaccaaa
ctccctttgaagtttcctgatgcagagacagaccagatcatgatgatctcctacatgatt
gatgggcagggctacctgatcacaaacagggagatcgtctctgaggatattgaagacttc
gagtttactcccaagccggagtatgagggtccattttgtgtctttaatgaaccagatgaa
gctcatttaatccagaggtggtttgaacatgtccaggagaccaaacccacaatcattgtc
acgtacaatggagacttctttgactggccctttgtggaagcaagagcggcagctcatgga
gttaatatgtatcaggaaattgggtttcagaaggacagccagggagagtacaaagcatcc
cagtgcatccacatggactgtctaaggtgggtgaagagagacagctacctcccagtggga
agtcacaacctgaaagcagcagctaaagcaaaactgggttacgatccagtggagctggac
cctgaagagatgtgccggatggctacagaggagcctcagaccctggccacctattcagtg
tccgacgcagttgctacctattacatgtatatgaagtatgtgcatcctttcatttttgcc
ttgtgcaccatcattcccatggagcctgatgaggtcttaaggaaaggatctgggacactg
tgtgaggcactgctgatggttcaggcttatcacgccaacatcatcttccccaacaagcag
gagcaggaattcaacaaacttacagaagatggccatgtgctggactcggagacgtacgtg
ggaggccacgtggaagcgctggaatctggggtcttccgcagtgacatcccctgccgcttc
aaaatgaatcccgctgccttcgacttcctggtgcagcgcgtggaaaagacactgcggcac
gccatcgaggaggaggagggtttgccattggatcaagtcaccaacttccaggaggtttgt
gatgaaatcaaggtcaagctgaattccctgaaagatgttccaaacagaattgagtgtccc
cttatctaccatctagatgtgggagctatgtaccccaatatcattctgaccaacaggttg
cagccctcagccatggtggatgaggccacgtgtgctgcctgcgacttcaacaagccgggt
gccaactgtcagcgccggatgacttggcagtggagaggagagttcatgcctgccagccgc
agtgagtatcaccgcatccagcagcagctggagtcggagaagttccctcccctgtccgcc
gagggaccaccccgcgccttccacgagctctcccgggaagaacaggcgaagtacgagaaa
aagcggctggcagattactgccgtaaggcatacaagaagatccacatcaccaaggtggag
gaacgagtcaccaccatctgccagcgagagaactctttctatgtggacacggtgcgagct
ttcagggaccgccgctatgagttcaaggggctacacaaggtgtggaagaagaagctgtct
gcagcagtggagacaggagatgcctctgaagtgaagcgctgcaagaacatggagatccta
tacgactccctgcagctggcccacaagtgcatcctcaactctttctatggctacgtcatg
cggaaaggagctcgctggtactccatggaaatggctggcatcgtctgtttcacaggagcg
agtatcatcacccaggccagggaactgattgagcagatcgggagacctctggaactggat
accgatgggatttggtgtgtcctccccaacagcttcccagagaactttgtcatcaagtca
accaacgccaagaagccgaaggtgacaatctcctaccctggtgccatgctgaacatcctg
gtgaaggaaggcttcacaaatgatcagtaccaggaactgcaggacccagcctctctcacc
tatgtcacgcgctcagagaacagcatcttttttgaagtggatggaccatatctggccatg
atcctcccagcttccaaggaggagggcaagaagctgaagaaaaggtacgcagtattcaac
gaggatgggtccctggccgagctgaaggggtttgaggtgaagcgccggggagagctgcag
ctggtgaagatattccagtcttctgtgtttgaagcctttctgaaaggcagcaccctggag
gaggtctacgcttctgtggccaaggtggcagattactggctggatgtgctctacagcaag
gctgccaacatgcctgattcagagctctttgagctgatctcggagaacaggtccatgtcg
cgcaagctggaggactatggggagcagaagtccacctccatcagcactgccaagcgcctg
gcagagttcctgggggaccagatggtgaaggatgcagggctgagctgccgattcatcatt
tccaagaaaccagaagggtctccggtcaccgagagggccatccccctcgccatcttccaa
gctgagcccagcgtgcgcaaacactacctccgaaaatggctgaagagcccctcgctgcag
gacttcaacatccgcgcgattctggactgggactactacatcgagagactgggcagcacc
atccagaaaatcatcaccattcctgcagccctgcagcaggtaaagaacccagtgccacgg
gtccggcacccagactggctccacaagaagctcctggagaaaaatgatgtgtacaaacag
aaaaaaatcaatgagctcttcacttcagaaggcaagagacaggtcctttccaaccagccc
ccagaggggatgcccagctcacagattggggacatagaggactttggggctgccaagacc
cttcggccatcgctccccgttgcaaataagcggaagcgagtccctgcagcagaggaaagc
caacagatgtcccagtacctggagctatctcagtcctggcgagagatcctgggtccgcct
ccgccgctgggcaccaccaaggaggagcggctggtctggctcccctaccaccaaaggaag
tgggagctgcaggctcggcagcggcgggagcggcggaagaggcggcgtctggaggacggt
ggggtggcagcaggtggaggagtggtccgcgatgccctctccaaagggctgagcagctac
ctccgcaagacagcgcgtagcatcctggacttaccctggcagattgtgcagatcgctgag
accagccagcctgggctgttcaggctgtgggcagtgatcgggagcgacttgcactgcatg
aggctgagcatcccccgggtcttctacgtcaaccagcgcgtcccgaagccggaggaggga
gcagcgtacaggagggtgaacaggatcctgccccgatcaaacttagtttacaacctgtac
gaatactctgtccctgaagacatgtaccaagagcacatcaatgaaatcaatgccgacctc
tctgctccggacatcgagggagtgtatgagacgcaggtgccgcttctcttccgtgccctg
atccatctgggctgtgtgtgcgtggtcagccggcagctcgtcaggcacctggcggggcgg
gaggccgaaacctttgacatcgagcagctggagatgcgctcgctggcccagttcacctac
ctggagccaggcatcttgtcacacacagaggggagagccccctggaactgtgcagcctgg
ggtccctctcccccagctctgacccagtcccccttgggcacagtacgcagcaaccagatg
ccgaatctcaccaccctcttctcggcggagcgcagtgcgctgctggaaaaggcaggcgaa
gagctgctgccccccgacaagcacacctttgaagtgcgcgccgagaccgaccccaaggca
gtctacagagctgtccagcggctgctgctgggctacaagaggctgcctcatcccttgatg
ggacaggcggggttccctgtcttctctgcagctgtgctcaccccgacgccgttcacctct
ctgtgccccaggtactaccacatccccattgggaacctccccgatgacatctccaccttt
ggctctgacctgttcttctcgcgccacctccgtcgtcacaaccatttgctgtggctctcg
ctcacggcccgcccagacctggggggtaaggaggctgatgacaaccgcctagtcatggag
tttgatgagagagcctccgtggagataaacaaccccggctgctactccacagtgtgtctg
gagctggacatccagagcctggctgtaaacacagtgttgcagtcccaccacataaacgac
atggaaggaggctccagcatgagtatcagctttgacgtgattcagcaggcgtccctagaa
gacatggtgacggggaaccaagctgccaacatcccggccagctatgatgaaactgccctc
tgctccaacactttcaggatcctgaagagcatggtggtgagctgggtgaaggagatcaca
cagtatcacaatgtctacgcagacaaccaggtcattcacttttaccgctggctccgctct
ccttcttccctgctctatgacccagcgctgcaccgcacgctccacaacatgatgaagaag
ctttttctgcagctggtggctgagttcaagcgtctgggctcctcggtggtttatgccaac
tttaaccggatcattctgtgcaccaagaagcggcgcattgaggatgccatcagctacatg
gagtacatcatcaacagcatccactccaaggagatcttccactctctgaccatctccttc
tcccgctgctgggagttcctgctctggatggatccagcaaattatggaggtatcaaggga
aaagtggattctcgcatccactacagagagaaggacaccagcaagaggcacgtgttggag
gaggaggacagcgaggaagaggaggaggaggcagcaggggaagatgaggaaggggaaggg
gagccaaacatggaggagctgctggagaacagctggaacatcgcacagttcctgccccag
gctgcctcctgccagagctacttcctgatgattgtgtcggcctacgttgtggccgtgtac
cacagcatgaaggaggagctgcggcgcaacgcccctgggagcaccccagtcaagcggagg
agcaccagccaggtgtcccaggaggtgctgggggagacaggggccatgcctggcatgatc
accttctcgcaggattatgtggctaatgagctcacccagagcttcttcaccatcacccag
aagatccagaagaagatggctggttctcgtaacgccactgagccttcagacatgttcccg
gtgctgcctggctcctacttgccgctcaataacccagctctggagttcatcaaatatgtt
tgcaaggtcctctctctggacaccaacataaccaaccaggtgaacaaactgcgccgggac
ctgctgcgtctcatcgaggtgggcgagttctcagaagcagctcagtttcgggacccttgc
cgctcctacatgctccctgaagtcatctgcaggaactgcaacttctgcagggacctggac
ctgtgcaaggaccctgccctctcccaggatgggtcggtgctgcccagctgggtctgctcc
aattgccaggcacagtacgaccctgatgccatcgaaacagccctagtggaagccctgcag
aagaagctgatggccttcgtgctgcaggacctggtgtgcaagaagtgtcatggtgtaaag
gagacacacatgcccgtgtactgcagctgcgctggagacttcaccctcaccatctcctcc
caggacgacgacaaggtgtaa
DBGET
integrated database retrieval system
