Opisthocomus hoazin (hoatzin): 104327488 Help Entry 104327488         CDS       T08436                                  Symbol RAD50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism oha  Opisthocomus hoazin (hoatzin) Pathway oha03440   Homologous recombination oha03450   Non-homologous end-joining oha04218   Cellular senescence Brite KEGG Orthology (KO) [BR:oha00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     104327488 (RAD50)    03450 Non-homologous end-joining     104327488 (RAD50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     104327488 (RAD50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:oha03032]     104327488 (RAD50)    03400 DNA repair and recombination proteins [BR:oha03400]     104327488 (RAD50) DNA replication proteins [BR:oha03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     104327488 (RAD50) DNA repair and recombination proteins [BR:oha03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      104327488 (RAD50)     BRCA1-C complex      104327488 (RAD50)    NHEJ (non-homologous end-joining)     MRX complex      104327488 (RAD50) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 AAA_15 SbcC_Walker_B SMC_N DUF2703 NPV_P10 AAA_29 AAA_24 AAA_13 Motif Other DBs NCBI-GeneID:  104327488 NCBI-ProteinID:  XP_009930693 UniProt:  A0A091VXP8 LinkDB All DBs Position Unknown AA seq 1312 aa AA seqDB search MSKIEKMSILGVRSFGVEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYISTGDFPPG TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLEGVITR TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF SATRYIKALETLRQVRLKQSAKVKECQTELKYLKQNKEKAQEIQDHLSNREAQLAASKEN VKSIESQLDPLKSSLAAVEQNLIKVMRLDNDVKALESRRRQMEKDNQDLQQKMEKVFQGT DEQLRDRYQNHQRTVKEKEKRLSDCKRELERATKECQRFNSEKSELLIERGRLQLQADRH QEHITTRDSLIQSLAAQLELDGFERAPFNERHVTSFHRLLKERQERDTEAANRLMREFAR KEAMKQKQMDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKHELQQLEGFSDRILELDQD IVKTEHELEKAERNSNVEALEREVQTLQNEKINLDKALRKLDQEMEQLNLHTMTITQMEM LKKDKAEKEDQIRKVKSRHSDELTSLLGYFPNKNQLEDWLHGKNRKINQTRDNLANLNKR LASVEYHKTYVSNELKRKEEQLSLHESKLFDVCGSQDFDSDLTKLQDEIEKSSKQRAVLA GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTEFELK RKEKKRDEMMSLKPLRRTVVELQDRDIPDLRNKIQNANRDLTGLKGEIEEQETVLQTALS EEEGAKARLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLSRTVLQVSHEKQEKKHLWD TVTGKIELNQKLKQDQQNQIQQLKSTVNELKAEKLQISSSMQRRRQLEEQTVELTTEVQS LCREIKEAKEQVSPLDATLEKLQQEKEDLMNKRTTSSKETQEKINGIKEKVKDINKYVKE IENYIQQRKDDYKKQKESELDEVNSQLAACEKQKEKISKEMEMIRQDIDTQKIQERWLED NLTLRKRNEELKEVEDNIKQLVKEMGEMKVPQMKNEQKHLEEKIESLKRNHHVALGRQRG FEEEIVRFKKELREAQFKDAEEKYREMMIVMRTTELANKDLDLYYKALDKAIMTFHSMKM EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRAQQR NFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcgaagattgagaaaatgagtatcctcggcgtgaggagttttggggtagaggataaa gacaaacaaattatcactttctttagtccgttaactattttggtgggaccaaatggtgca ggaaaaacgactattattgaatgtcttaaatatatatccactggagattttcctcctggc accaaaggaaactcatttgtgcacgatccaaaggttgccaatgaaacagatgttagagct cagattcgattacagtttcgagatgtaaatggggagcttgtagctgtccagcgatccatg gtctgtacccagaaaggcaagaaaacagaatttaaaacacttgaaggcgtcattactaga acaaagcatggcgagaaggtcagtctgagttccaagtgtgccgaaatcgatcgagagatg atcagtgcccttggtgtttccaaatcggtgataaacaatgtcattttctgccaccaagaa gaatccaactggccattaagtgaagggaaggccctgaaacaaaaattcgatgagatcttt tcagcaacaaggtatattaaagcactcgaaactctccgtcaggtacgactgaaacaaagc gcgaaagtaaaagagtgtcagacagagctcaaatacttaaaacagaataaagaaaaagca caggaaatccaggatcatcttagcaatagagaggctcagctggctgcgtccaaggagaat gtaaaatcaattgagagtcagcttgaccctctaaagagttctctagcagcagttgaacag aatctcataaaagtaatgaggctagacaacgacgtaaaagctctggagagcaggaggcgg cagatggagaaagataatcaagatttgcaacagaagatggaaaaggtttttcagggaaca gatgaacagctaagggacagataccagaaccaccagagaaccgtgaaggagaaggagaag aggttatcagactgcaagcgggaattagagcgagccactaaagaatgccagaggtttaac agtgagaaatcagaactacttattgaacgaggtcgtctgcaactgcaagcagatcgtcac caagaacacatcacaacgagggattcattaattcagtctttagcagcacagctggaatta gatggctttgagcgagcacctttcaatgaaagacacgttaccagttttcacaggttgctg aaggagagacaggagagagatacagaagctgcaaatcgtttaatgagagaatttgcacga aaagaagcgatgaaacaaaaacagatggatgaaataagagacaagaaaactggattagaa agaaccattgacctgaaatcggacattcaaaataagaagcaagttgagctgaagaatgta aaacatgaattgcagcagttggaggggttttcagacagaattctggagctggatcaggac attgtcaagacagagcatgagctggagaaggctgagaggaacagcaatgtagaagcactc gaacgggaagtacaaactctgcaaaatgagaaaataaacctggacaaagctcttcggaag ctggatcaagagatggaacagttgaatctacataccatgacgattacccaaatggagatg ctgaagaaagataaagcagagaaagaagaccagatcagaaaagtaaaatcaagacattct gatgaactgacatcactgttgggatactttccaaataaaaaccaacttgaggactggctt catggtaaaaatagaaagatcaatcagacaagggataaccttgctaacctgaacaaacgt ctggcatcagtagaataccataaaacttatgtcagcaatgagctaaaaagaaaagaagag caattgtcacttcatgagtcaaaactttttgatgtttgtgggagccaagattttgacagt gatctgaccaaacttcaggatgaaattgaaaaaagttcaaaacagcgagctgtgcttgct ggagccactgcggtttattcgcagttcatcacacagctgacggaggagaaccagtcgtgt tgtccggtttgtcaaagggtttttcaaacagaggctgaactgcaagacgtaattagtgat ctgcagtctaagctgcgtcttgctccagacaaactgaagtcaacagagttcgagctgaaa agaaaagagaaaaaacgtgatgaaatgatgagtcttaaaccacttcggcgaactgtagtt gaactccaagacagggacataccagacttgaggaacaagatacagaatgccaacagggac ttaacaggcctgaagggtgagatagaagaacaggaaacggtcttacagacagcgttgtct gaggaggagggtgccaaggcacgcttgcaggatataaccctaatggagaggtaccagact gatattagggacgttgaacgaaaaattgctcagcaggaggctaagctgctaggggtcgat ttaagtagaactgttctacaagtaagccatgaaaaacaagaaaagaaacacttgtgggat acagttactggaaagattgagttaaatcaaaaactcaagcaagaccagcaaaatcagatt cagcagctgaagagtacagttaatgagcttaaagcagagaaacttcagatttccagcagc atgcagcgtcgtcgacaactggaggaacaaacagtggaattaaccactgaggttcagtcc ttatgcagagagatcaaggaagcgaaagaacaggtatctcctttggatgcaacattagaa aaactgcagcaggagaaggaggatctgatgaataaaaggaccacgagtagtaaagaaaca caagagaagataaatggcataaaagagaaagttaaggatataaacaagtacgtgaaagaa attgaaaactatattcaacaaagaaaagacgactataaaaagcaaaaggagtctgaactt gatgaagtaaattctcagttagctgcctgtgagaaacagaaggaaaagataagtaaagag atggaaatgattcgacaagatattgacactcaaaagatacaggaaaggtggctagaggat aatcttactttgaggaaacggaatgaagagctgaaggaagttgaagacaatataaaacaa cttgtgaaggagatgggagaaatgaaagtcccgcaaatgaaaaacgaacaaaaacattta gaggagaaaatagaatctctgaaaagaaaccatcatgttgcacttggccgacagcgtgga tttgaggaagagattgttcggtttaaaaaggaacttcgagaggcacagttcaaagatgca gaggaaaaatacagggagatgatgattgttatgagaacaacagagctggcgaacaaagat ctggacctttattacaaggctcttgataaagcaataatgacatttcatagcatgaaaatg gaagaaatcaacaaaataattcgtgacctttggcgaagcacctacagaggacaagatatc gaatatatagaaattcgttctgacgcagatgagaacgtctcagcctctgataaaagaaga agttacaattacagagtagtaatgataaagggagatacagcactggatatgcgaggaaga tgtagtgctgggcaaaaggtgcttgcttctcttattattcgccttgctctagcagaaacg ttctgtctcaactgtggcatattggcactagacgagcctactaccaatcttgaccgagaa aacatagagtccctcgcgcatgcgctggtggagataataaaaagccgcgcacaacagcgt aactttcagcttctggtgataactcacgatgaagattttgttgaacttctgggtcgttct gaatatgtggaaacgttctacaggataaagaagaacattgaccagtgctccgagatcatg aaatgcagtgtcagctccctagggtcgtacgtgcattag

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