KEGG   Opisthocomus hoazin (hoatzin): 104327841
Entry
104327841         CDS       T08436                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
oha  Opisthocomus hoazin (hoatzin)
Pathway
oha03013  Nucleocytoplasmic transport
oha03015  mRNA surveillance pathway
oha03040  Spliceosome
oha05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104327841 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    104327841 (ALYREF)
   03015 mRNA surveillance pathway
    104327841 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    104327841 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oha03019]
    104327841 (ALYREF)
   03041 Spliceosome [BR:oha03041]
    104327841 (ALYREF)
Messenger RNA biogenesis [BR:oha03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104327841 (ALYREF)
    TREX complex
     104327841 (ALYREF)
Spliceosome [BR:oha03041]
 Complex C
  Other components
   EJC/TREX
    104327841 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104327841 (ALYREF)
SSDB
Motif
Pfam: FoP_duplication RRM_1
Other DBs
NCBI-GeneID: 104327841
NCBI-ProteinID: XP_009931096
LinkDB
Position
Unknown
AA seq 144 aa
MAFWEAAELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPM
NIQLVTSQIDTQRRPAQSVNRGGMTRNRGGSGFGGGGGNRRGTRGGNRGRGRGAGRTSKQ
QLSAEELDAQLDAYNARIFEKDRV
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcgttttgggaagcggctgagctctttgcagagtttgggaccttgaagaaggcagct
gtgcactatgacagatctggccgcagcctagggacggcagacgtgcatttcgagaggaag
gcagacgctctgaaagcgatgaagcagtacaacggcgtccccttggatgggcgccccatg
aacatccagctggtcacgtcacaaatcgacacacagaggagaccagcacagagtgtaaac
agaggtggcatgaccagaaaccgcggtggctcaggatttggtggtggaggaggcaacagg
cgaggtactcgtggcgggaacagggggagaggcagaggagccgggagaacttccaaacag
cagctctccgcagaggaactagatgcacagctggatgcttacaatgccaggatctttgaa
aaggaccgcgtgtga

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