Opisthocomus hoazin (hoatzin): 104328161
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Entry
104328161 CDS
T08436
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04140
Autophagy - animal
oha04148
Efferocytosis
oha05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104328161 (VPS18)
04148 Efferocytosis
104328161 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104328161 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oha04131
]
104328161 (VPS18)
Membrane trafficking [BR:
oha04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104328161 (VPS18)
Hops complex
104328161 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-RING_UBOX
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
Nup54_57_C
LETM1_C
STX17_N
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
104328161
NCBI-ProteinID:
XP_009931449
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MVSVIVLPARETCRHEAGYVNARLEKETPIFNKQRIDFAPPEKINSLVVSSNQLCMSLGK
DTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSECLYLNRSVQKVRA
LSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISISEGSLFSTNPDQYFRQV
YTLEEESGPAPVCCLETERGMEGKFFIIATTRKRLFQFVGKVPEGTEQQGFSSIFAMHAD
HLPSFREFPASFGFSEIAFYTPKLRSNSRSFAWMMGNGVLYGTLDYSRPDSILSDERVWV
YPSDIDITVNKPISIVLTQFHFLLLLHDRVKAVCTLNGQVVFQDLFLEKFGLLTRMIKDP
TVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPECLDIVLAKEAEHC
FQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNLKPSEKTQTTLLTT
WLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNRASIYELLASHGDT
EHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSPVLIQHIPKKVVDA
WISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQQAIHNYLLSLYAL
CRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVMELYEEAVDLALQV
DVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSCALLKIEDVLPFFP
DFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEMRNKYGSVEPQEKC
AACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQKKLAATSQPSKSHH
RPKDADTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPFIDPQKYEEEMQSW
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgtcatcgtgctcccagcaagggagacctgtcggcacgaggcaggatatgtg
aatgcacgactggagaaggaaacgccaatatttaacaagcaaaggattgattttgctcct
ccagagaaaattaacagcttagtggtctcctctaaccagctctgtatgagccttggcaaa
gacacccttctcaggattgatcttgggaagccagatgaacctaatcaggtagagctggga
cgcaaagatgaagccaaagtctacaagatgtttttggaccacacaggctctcatctcctg
attgctctgaacactagtgaatgcctttacctgaacagaagtgttcagaaagtgcgagca
ctctcccgctggaaaggccacttgattgaaagtgtgggctggaacaaatttctcggttca
gagaccaacactgggcctatcctggttgggacagcccaggggcagatctatgaggctgaa
atctccatcagcgagggaagcctcttcagcactaatcccgaccagtacttccgacaggtc
tacactctggaggaggaatcaggacctgccccagtctgctgcttggagactgaacgaggg
atggaagggaaattttttattatagccaccactcgaaagagactcttccagtttgttggc
aaagtgcctgaagggacagagcagcaaggcttcagctccatatttgctatgcatgctgac
catttgcccagcttccgggagtttccagccagctttggtttcagcgagatagccttttac
accccaaaactgcgctccaactcacgctcctttgcctggatgatgggaaatggtgtttta
tatggtacattggattatagccgtcctgattcaattctgagtgatgaacgggtctgggtt
tatccttctgatattgacataacagtgaacaaaccaatatccattgtacttacccagttc
cacttcctgttgctgctgcatgatcgggtgaaggctgtatgcactctgaatgggcaggtt
gtttttcaagatctgttcctggagaagtttggcttgctgacacgcatgatcaaagatccc
acagtccagcagatatggatccacactgagaaagtagtgttccgctaccacgtccagcgg
gaatctagagatgtgtggaagatgtatatgaatatgaacaagtttgatttagccaaagag
tattgtaaagaccgtccagagtgcctagatattgtgctggcaaaagaggcagagcactgc
ttccaaaacaagaggtatctagacagtgccaaatgctatgcgctgacccagaactacttt
gaggaaattgcccttaagttcattgaagccaagcaagaagaggctctgatggagtttctc
attaagaagctaagtaacctaaagccttctgagaagacacagaccactctgctgaccacg
tggttaacggagctgtacctgaactggctaggcatattggaaggagatccctcacagcga
aatctctatttggatacacgggagaagtttcgtactttcctgagcagtcctaaaaacaaa
gactgtctgtttaataaccgggcatctatttatgagctgttggcaagccacggggacaca
gagcacatggtctactttgcagtcatcatgcaggactacgagcgtgtagtagctcaccac
tgccagcatgatgagtacgatgaagctctaaatgtgctgtccaggcacagagacgagaag
ctgttctacaagttctctccagtcctcatccagcatattcccaagaaggtagtagatgct
tggatttctatgggctctaggctggatgccaggaacctcattccagctcttgttaactat
agccagagtgccagcacccagcagatcaatgaagccattagatatatggagttctgtgtc
tatcagctggaggaaacccagcaagccattcacaactacctattgtctctttatgctttg
tgtcggccggactcgctgctatcatacctggagcaagcaggaaccaacccaaacaggatc
cattatgacctgaagtatgcattgcgcctgtgtgcagagcatgggcaccaccatgcatgt
gtccatatttacaaagtgatggaattatatgaggaggctgtggatcttgccttacaggtg
gatgttgatcttgccaagtcctgtgcagatctgcctgaagatgatgaggaactccggaag
aaactctggttgaagattgctcgccatgttgttcaggaagagaaggatgtcaagaaggca
atggcctgcctctccagctgtgccctgctgaagattgaagatgtcctgccattctttcca
gactttgtcactattgaccatttcaaggaggcaatctgtaactccctggaggactacaac
aagcacattgaggagctgaaaagggagatggaggaggctacacagagtgccaagagaatc
cgagaggacatccaggaaatgagaaataagtatggctctgtggagcctcaggaaaaatgt
gctgcttgtgactttccacttctgaaccgccctttttaccttttcctttgtggtcacatg
tttcactatgactgtctcctccaagccgttttcccaaaccttcctgcctataagcaggca
aaacttgaagatcttcagaagaagctggcagctaccagtcagccttccaagagccaccat
cgtcccaaggacgcagataccattagcttggggaaggggcagcagagccgggaacagatc
aaagctgacattgatgacattgtggcagccgaatgtgtgtactgtggtgagctgatgatc
cggtccattgacaagccttttattgatccccaaaaatatgaagaggagatgcaaagctgg
ctgtag
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integrated database retrieval system
