KEGG   Opisthocomus hoazin (hoatzin): 104328470
Entry
104328470         CDS       T08436                                 
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
oha  Opisthocomus hoazin (hoatzin)
Pathway
oha04382  Cornified envelope formation
oha04510  Focal adhesion
oha04512  ECM-receptor interaction
oha04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oha00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104328470 (COL4A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104328470 (COL4A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104328470 (COL4A1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    104328470 (COL4A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oha04147]
    104328470 (COL4A1)
   00536 Glycosaminoglycan binding proteins [BR:oha00536]
    104328470 (COL4A1)
Exosome [BR:oha04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104328470 (COL4A1)
Glycosaminoglycan binding proteins [BR:oha00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104328470 (COL4A1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 104328470
NCBI-ProteinID: XP_009931794
LinkDB
Position
Unknown
AA seq 1647 aa
MELCIGDVHAVRGCSGCGKCDCSGVKGQKGERGLPGLQGVIGFPGMQGPEGPPGPPGLKG
DTGEPGLPGTKGTRGPPGASGFPGNPGLPGIPVCNGTKGERGPVGPPGLPGLTGSIGPPG
PPGMKGDPGEVIGLLPPSVLKGDKGFPGQPGLPGPPGTPGFQGPMGPQGPPGDPGPPGPP
GLPGEKGYMGLGFQGPKGEKGEQGVRGPPGPPGPAPHMKEKGAEIIRGEKGEPGEKGEQG
LPGFPGSGFKGEKGEPGKPGPRGKPGKDGEPGPKGESGLPGGFGIPGRPGEPGAKGDKGE
PGFPGPPGRVIDGPVDTFGEKGEPGLSGLPGLKGQKGEKGFPGIQGIPGPPGRPLPDRAG
SPGVPGERGEKGEKGSPGFPLPGPPGRDGFPGPPGLPGPPGPPGKTDGIDQCQQGEPGTP
GSPGPPGRDGFPGEMGEKGDKGESCALCDTVGPPGLPGPQGPPGPSGFPGQSGFKGDRGL
PGLDGLPGVPGPPGTPGLMGIPGAKGEPGDFSYDSILKGEKGDPGFPGQPGTPGREGRPG
KDGLPGLQGPKGASGTAGLKGERGPPGQPGFPGVRGERGFPGPPGVGAAGLPGDKGDRGF
AGTPGLPGLPGAKGEAGRTVPLPGPPGADGLPGPPGFPGPQGDKGNPGLPGRPGLPGEKG
AVGQPGIGFPGPPGPKGFQGQPGSPGLPGTPGTPGLDGLPGVPGLQGQKGEPGVGLPGPK
GLPGAPGPAGIPGEKGNPGLPGLRGEQGFPGIPGQQGFRGDPGLPGLQGLQGPPGAPGLG
PQGSPGPAGQPGPQGPPGFPGIKGERGFPGIPGLDMPGPKGDKGSQGQPGVPGSVGLPGL
PGPQGAVGLKGSSGAKGEMGVMGTPGLPGTPGPVGDRGFPGEKGSQGFRGLIGPQGDPGV
KGDKGEAGLPGKPGTMDNMDMVSLKGQKGDQGEKGDHGATGEKGLRGEYGEPGIPGKDGE
PGTPGHPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLPGTPGEKGLPGVPGSPGTPGFPGQ
KGEKGDKGAPGFPGIGFPGSPGEKGEPGRTGSPGLSGDKGEKGSAGIPGMPGVPGPKGSP
GMAGFPGNPGRHGEKGEKGLPGLSGIPGLKGEPGEPGVPGPAGSIGQKGEPGYDGIPGAA
GAKGEQGIPGRGLPGFPGAKGDKGAKGDVGFPGSPGSPGIPGLKGEPGYAGPPGPKGSQG
LPGLPGSAIEGPKGDRGPQGQPGLPGLPGPTGPPGTPGLKGAKGEQGSNGWPGTPGGPGV
KGDPGFQGLPGSPGLPGDIGPKGDLGPPGVPGVPGPKGTPGFPGLKGERGDQGLPGSKGL
QGLPGPPGPFQLVKGDPGLPGPVGPVGLKGFPGLPGPKGQQGVTGPSGVPGPPGSPGFDG
KPGQKGEVGPYGPPGPRGFPGPPGPEGLPGAMGPPGAPSVAHGFLVTRHSQTTEEPSCPF
GTRLIYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYW
LSTPEPMPMSMAPITGDSIRPFISRCSVCEAPAMVIAVHSQTIQIPPCPEGWSSLWIGYS
FVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANAYSFWLATIERNEMF
KKPTPSTLKAGDLRSNVSRCQVCMRKT
NT seq 4944 nt   +upstreamnt  +downstreamnt
atggaactatgcattggggacgttcatgccgtgcggggctgttccggttgtggaaaatgt
gactgcagtggagtaaaagggcaaaagggagaaagaggcttgccgggactacagggtgtg
attgggtttcctggaatgcaaggacctgaaggtccccctgggccaccagggcttaagggt
gatactggagaaccaggactgccaggaacaaagggaacaagaggccccccaggagcatca
ggctttccaggaaacccaggccttcctggcattccagtatgtaatggcacaaagggtgaa
agaggtccagttggtcccccaggtttaccagggctgactgggagcataggaccgccagga
cctcctggaatgaagggagatccaggtgaagtgattggtcttttacctcctagtgtgtta
aaaggtgataaaggctttcctggccaacctggactacctggtccacctggaactccaggg
tttcagggaccaatggggccacaggggcctccgggagatccaggtcctccagggccacca
ggactcccaggcgagaagggctacatgggcttgggctttcagggtcccaaaggtgaaaag
ggagaacaaggagtaaggggccctccaggcccaccaggaccagcaccacatatgaaagaa
aagggggctgaaatcataaggggagaaaagggtgaaccaggtgaaaagggtgaacaggga
ctcccaggatttccaggttcaggtttcaaaggagaaaagggtgaacctgggaagcctggt
ccacgtggaaagcctggaaaagatggtgaaccaggaccaaaaggagaatccggcttgcct
ggtggatttgggattccaggacgacccggggagcctggtgcgaagggtgacaaaggtgaa
ccaggttttccaggacctccaggaagagttatagatggaccagtagatacctttggtgaa
aaaggagagcctggactgtcaggtttgcctggactgaaaggtcaaaaaggtgaaaaaggt
ttccctggtatacaaggaatcccaggacctccaggtcgaccacttccagacagggcaggg
tcacctggtgtccctggagagagaggtgaaaaaggtgaaaagggttctccgggattccct
ttacctggaccccctggaagagatggtttcccgggtcccccggggttgcctggcccacca
ggtcctccaggcaaaacagacggaattgatcaatgccagcagggagaacctggtacacca
ggtagtcctggaccgccaggaagagatggatttccaggagagatgggagagaaaggtgac
aaaggtgaatcttgtgccttatgtgatacagtaggacctcctggacttccaggaccacaa
gggccacctggtccatcaggttttccaggacaatcaggtttcaagggtgacagaggctta
cctggacttgatggccttccaggggtacctgggccccccggcactccaggacttatgggc
atccctggggcaaaaggagaaccaggagatttttcgtatgattctatcctgaaaggtgaa
aagggagatcctggtttcccaggacaaccaggtactcctggaagagaaggaagaccagga
aaagatggcttgccaggtctccagggcccaaaaggagcatcgggtacagctggcttgaaa
ggagaacgtggtccccctggccaacctggattccctggagtacgtggtgaaagaggtttt
cctggccctcctggggtaggcgctgcagggttgcccggcgacaaaggagacagaggcttt
gctggaaccccaggtttaccaggccttccaggagcaaagggtgaagcaggacgaactgta
ccgctccccggccctcctggggcagatggccttcctgggccacctggcttccctggaccc
caaggtgacaaagggaatcctgggcttccaggcagacccggcctgccaggagaaaaaggt
gctgtcgggcagccaggtatagggttccctggacctccaggacccaaaggtttccagggt
cagcctggctcgccaggtctgccaggtactccgggaacccctggcctggatggtttgcca
ggtgtaccaggtctacaaggtcaaaaaggcgaacctggtgtaggtctccctggccctaag
ggattgccaggcgccccaggcccagctggcatccctggagaaaagggaaatccaggactg
cctggcttacgtggcgagcaaggctttccgggcatacctggacagcaaggattcagaggt
gaccccggccttccaggactgcaaggcttgcagggccccccgggcgcgccggggctgggc
ccacagggatcaccgggacccgccgggcagccgggaccccagggaccgccgggatttcct
ggaataaaaggagaaaggggcttccctggtatcccaggtctagacatgccaggaccaaaa
ggggataaaggtagccagggccagcccggagtaccagggtctgtggggttacctggccta
ccgggtccacagggggctgttggactgaaaggatcatcaggagctaaaggagaaatggga
gttatgggaactcctggattgccagggactcctggaccagttggagatcgagggtttcct
ggtgaaaaaggtagccaaggtttcagaggtttaattggaccacagggtgatcctggtgtc
aaaggggataaaggtgaagccggtctcccaggaaaacctggaacaatggacaacatggac
atggttagtcttaaaggccaaaagggagatcaaggagaaaaaggggaccacggagcaaca
ggagaaaaagggttacgtggggaatatggagaaccaggaattcctggaaaggatggtgaa
cctggtactccagggcatccaggaccaaaaggtgatcagggccccccagggtacccaggc
gatccaggaattccaggacaaaaaggatcggttggtgaaatgggtttgccaggaacacct
ggagaaaagggtctgccgggagtaccaggttcgccaggcacaccagggttccctgggcaa
aaaggtgaaaaaggagacaaaggagcaccaggttttcccggaattggctttccagggtct
cctggtgagaagggagaaccaggaagaactggtagtccaggtttatctggagataagggt
gaaaaaggtagtgccggaattcctggaatgccgggtgtcccaggtcccaaaggatcccct
ggcatggcaggatttccaggcaatcctggccgtcatggagaaaagggtgaaaaaggactt
cctggcttaagtggcattccgggtttaaaaggagaaccaggtgaacctggtgttcccggt
cctgctggttccatcggacagaagggtgaaccaggttatgatgggattccaggtgccgct
ggtgcaaagggtgaacaaggcattccaggtagaggacttccaggatttccaggtgcaaag
ggagataaaggtgcaaaaggtgatgtgggctttccaggatccccaggaagtccggggatc
ccaggtctgaaaggagaaccagggtatgctggtccgccaggccctaagggcagccaaggt
cttcctggactaccgggaagtgcgattgagggccctaaaggagacagaggaccccaaggc
caacctggccttccaggtttaccgggtccaacagggccaccaggaacccccggtctaaaa
ggagccaaaggagagcaggggagcaatggctggcctgggactcctggaggtccaggggtc
aaaggtgatccaggtttccagggactaccaggtagtcctggtttaccaggagatattggt
ccaaagggtgatctgggacctccaggagttccaggcgttccaggtccaaaaggaactcct
ggcttcccaggccttaaaggtgaacgaggtgaccaaggtcttcctggatctaaaggttta
caaggcctaccaggcccaccgggtccttttcagcttgttaaaggggatcctggcttacct
ggccctgtaggaccagttggtctcaaaggattcccaggacttccaggtcccaaaggacag
caaggggtgacaggaccttcgggtgtgcctggaccacctggtagtccagggtttgatggt
aaacctgggcaaaaaggagaagttggtccttatggtcccccaggccccagaggattccct
ggtccacctggccctgaaggtttgcctggggctatgggcccaccaggtgcaccatctgtt
gctcatggcttccttgttaccagacacagtcaaaccactgaagaaccatcatgtccattt
ggaacaaggctgatttaccatggctactccttgctttatgtacaaggcaatgaaagagca
catgggcaagatctgggcacggcagggagctgtcttcgtaaatttagtaccatgcctttc
ttattctgcaatatcaacaacgtatgtaactttgcatcgaggaatgactattcgtactgg
ctgtccactcctgaacccatgccaatgagtatggctcctatcactggtgatagtatcaga
ccattcatcagcagatgctctgtatgtgaagctcctgctatggtaatagctgttcacagc
caaacaattcaaataccaccctgtcctgaaggctggagttccctttggatcggttactcc
tttgtcatgcacaccagtgctggtgcggagggctctggccaggccctggcgtctcctggt
tcctgcctagaggagtttcgcagcgctcccttcattgaatgccatggccggggcacctgc
aattattatgcaaatgcttacagcttctggcttgccactatagagaggaatgagatgttc
aagaaaccgactccctccactttgaaagccggggatctgcgctcaaatgttagccgttgt
caagtctgtatgagaaaaacataa

DBGET integrated database retrieval system