Opisthocomus hoazin (hoatzin): 104328602
Help
Entry
104328602 CDS
T08436
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104328602 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104328602 (EDC4)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104328602 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
104328602 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
104328602
NCBI-ProteinID:
XP_009931931
LinkDB
All DBs
Position
Unknown
AA seq
1397 aa
AA seq
DB search
MEYVTLFALHILRLPGEEMFANLNLSNRRALDGLTDEGSSGSVNENQRPSNSYNGDLNGL
LVPDPIVAGDGPSLSKPVHRSVSLGALQEKQVICLSGDDSSTCVVILAKDVEIVASSDSS
ITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTA
ERTLLKGFTGGVADLAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPDST
PLNTSRRIIWCPFIPDDNEESGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWLVEVPNIK
EGFIVVKGHSTCLSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRP
LSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSIL
PSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAV
SRCRLRHTEVLPAEEENDNLSVEGAQGAGAVESAAGVLIKLFCVHTNSCKLIYISALEAF
PDHMADLSTEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPST
SLQQIAVSPGSSVSSLTAVTAMSSTSVTDASMPRPSEDLTVSPKMQLDTSLTLSSSSSSL
QTSPRSHSVLIPGLPDKLTPKAPVPVMPGNPSLALELKEVEPLVVPQASPTRERSPDVIS
SASTAMSQDIPEIASETLQRSFAAAPSGLPVEVLEPSHHTDSMASAASALHLLSPRNRHN
SEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRNSMADS
PRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLP
VKDWKAKASPRASPKLKRKGKKDDGDVNHSPRSSNNQVTPEFQDELMCVLRSQQRELSEL
RQNQMELLQRLTDHLDAIQSSLMGHVERVLDSQQEQEQRRLDRALTEGQQRNGQLQEHLS
QQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSLDPIAGQLSNTIATKITAVEGTLKES
ITKLVKSKNLTDTVVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINDTFKQG
TQEYIQQLETHLKNKKVREQEARDPLLNQLRQLISTFQSSTEQLASTVAASVHAEVQHQL
HIIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSTHLDFQSQ
QTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLLSLIQQ
LSSDLGTRTELKLNYLEEAVMHLDQSDPITRDHMGSVMNQVRQKLFQFLQVEPHNTLSKP
ARRLMIMLQGLVTPGMT
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgtgacgctgtttgccctgcatatcctccggctgcctggtgaggaaatgttt
gcaaacctaaacctctccaaccgaagagcacttgatggtctcaccgatgaaggcagttca
ggttcagtgaatgagaaccagagaccgtcaaattcgtataacggagacctgaatggactg
ctggtgcctgaccccatcgtggctggagatggaccgtctctgtcaaagccggtgcatcgc
agcgtttctctgggggccctgcaggagaagcaagtcatctgcctttctggtgatgacagc
tctacctgcgtagtgatattagcaaaagatgtggagatagtggccagcagcgattccagc
atcaccagtaaggccagagggagtaacaaggtgaaaatacagcctgttgctagatatgac
tgggagcagaaatactattatggcaatctgatagccgtttcaaactcttacctggcttat
gccattagagctgccagtaacggctccgctatggtgcgggtgttgagcgtcagcactgca
gagcggaccttgctgaaaggattcacgggcggtgtggcagacctggcttttgctcatctc
aactccaaccagctggcgtgcctggatgaggccggcaacctttttgtctggcgcctggcc
atggataaagagaaaatccaagaggagatcctggttaacatcaagcgacctgacagtacc
ccgttgaacacctctcgaagaatcatctggtgtcctttcatccccgatgataatgaggag
agcggtgaagagggaagtcagacgttggcgttgttgcacgaggacagggcagaggtgtgg
gatttggacattatccgaacaaacaacagctcctggctggtggaagtgcctaacatcaaa
gagggcttcatcgtagtgaaaggccacagcacgtgcctgagtgagggagcactttcccca
gatggaactgtgttggccacagcaagccacgatggttttgtcaagttctggcagatctat
attgaggggcaagatgaaccaaggtgtcttcatgagtggaaaccccatgatggtaggcct
ctttcctgcctgctcttttgtgacaaccataaaaaacaagacccagaggttcccttctgg
agatttctcatcacaggagcagaccagaatagagaactgaagatgtggtgcactgtgtct
tggacctgtctgcagactgtccgcttttctcctgacatcttcagctccatgagtattctt
cccagcctgaaagtctgcctggacctctctgctgaatatctgatactgagcgatgtgcag
agaaaagtcttgtatgtgatggagctgatgcagaaccaagaggagggcaaagcttacttc
agctccatctccgagttccttcttacccacccagtcctaagctttggtatccaggcagtg
agccgctgccgattaaggcacaccgaagtgctcccagcagaagaggagaatgacaacttg
agtgtagaaggtgctcagggagccggggctgttgaatcagccgcaggcgtgctgataaaa
ctcttctgtgtgcacaccaattcctgtaagttgatttatatttctgccttggaagccttt
ccagaccacatggctgatctaagcacggaagggctgggatctgaaaaaggatcggtgcat
ggctctcagccagacctgcgacgtattgctgatctgcctgtaccagcggacttcctttct
ctctcaaacgatgctaaacctaagctgatgactccagatgcattcatgacaccaagtaca
tctcttcaacagattgctgtatctccaggcagcagcgtcagttccctgacagcagtcaca
gccatgagtagcacttctgtcacagatgcctctatgcccaggccatcggaagacttgact
gtgagccccaagatgcagctggacaccagcctcacgctgagcagcagtagcagcagtctc
cagaccagtcctaggagccattcagttcttatcccaggcctccctgacaagctgacacca
aaggcacctgttccagtcatgccaggaaacccctctctagcactggaactgaaggaggtg
gagcccttggtggtgccccaggcttctcccacccgcgagcgctcgccagacgtcatttcc
tctgcctccacagccatgtcccaagatatcccagagattgcttctgagaccttgcaacgc
agctttgcggcagctccatctgggctccccgtggaggtgctggagcccagtcatcacaca
gacagtatggcatccgctgcctcagccttgcatttgctgtctccaaggaaccgacacaat
tcagagcacagccaccactctttggacatgcctccagtggaggtggacagactgaatgct
ccatcattactggaaactgctttaactcaggaaaatgcatcttctgacagcgttgtgagt
caaccatggccagcagctcctgacataaccagagaaaccaggaacagcatggcagacagc
ccaagggatgaggttgaagaaaagcacaagagctcttcctaccatcgacacagctaccac
ctgctacagcatgacagccaggatgctagtgcagaacaaagtgaccatgatgatgaagtt
gcaagcttggcttctacgtcaggtggatttggtgccaaagcatctacgcagaggctgcct
gtgaaggactggaaagccaaggcatcccctcgggcttccccaaagctaaagcggaagggc
aagaaagatgacggggatgtgaaccattcgccaagatcctctaacaaccaggtgacgccc
gagttccaggatgagctgatgtgcgtattgaggagccaacagcgggagctctctgagctg
cgtcagaaccagatggagctgctgcagaggctcacggatcacctcgacgccattcagagc
tccctcatgggccacgtggagagggtgctggactcccagcaggagcaggagcagagaagg
ctagaccgagcactgacggaaggacagcagcgcaacgggcagctccaggagcatctgtct
cagcagctctctcagtccctttccactgctgtgtgtaaccgtctggagaggaccattcgc
gaggagatgaagaagactgtaccccagtgcatttccaagagcctggaccctattgctggc
cagctgagtaacactattgccaccaagatcactgctgttgaggggacattgaaggagagt
atcaccaagctagtgaaatcaaagaaccttacagataccgttgtgagggcaacagctgat
accctgcaggggccgatccagtcagcttaccgggaagcttttcagagtgttgtgttgcca
gccttcgagaagagctgccagtccatgttccagcaaatcaatgacaccttcaagcaaggc
acacaggaatatatccagcagctggagactcacttgaagaacaagaaggtacgagaacag
gaggcgcgggacccactgctgaatcagcttcgacagctcatcagcaccttccagagcagc
accgagcagctggcttccactgtcgcagccagcgtccacgccgaggtgcagcaccagctg
cacattatcgtgggcaacatgcaggagtctattttggcccaggtgcagagagtcattaaa
ggagaagtgagcctggctatgaaggagcagcaagcagctgtcacctcgagcatcgtccag
gcgatgcgctcggcagccgggactccgatcccctctactcacttggatttccagtctcag
caaactcacatccttcagctgctccagcagggacacctcaaccaagctttccagcaggct
ctaacagcagctgatctcaacctggtcctgtatgtctgtgagactgtggatactcagcaa
gtgttcgggcagcatccgtgcccgctgtcccagcctgtgctgctgtccctcattcagcag
ctctcctcggatctgggtactcgtacagaactgaagctgaactacttggaggaagcagtg
atgcacctggaccagagtgaccccatcacccgagaccacatggggtcagtcatgaaccag
gtgcggcagaagctcttccagttcctccaggtggaaccccacaacacgctgagcaagcct
gcccgtcgcctcatgatcatgctccagggcctggtcacccctggcatgacctag
DBGET
integrated database retrieval system
